RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ANK3Q12955 4377 aaKnown RBP14.63□□□□□ -0.07
TRIM47-201ENST00000254816 RANP62826 216 aaKnown RBP14.63□□□□□ -0.07
TRIM47-201ENST00000254816 NHLRC2Q8NBF2 726 aa14.63□□□□□ -0.07
TRIM47-201ENST00000254816 CD5LO43866 347 aa14.62□□□□□ -0.07
TRIM47-201ENST00000254816 IGHV3-11P01762 117 aa14.62□□□□□ -0.07
TRIM47-201ENST00000254816 NBEAP1P0C6P0 100 aa14.62□□□□□ -0.07
TRIM47-201ENST00000254816 CFHR3Q02985 330 aa14.62□□□□□ -0.07
TRIM47-201ENST00000254816 C10orf99Q6UWK7 81 aa14.62□□□□□ -0.07
TRIM47-201ENST00000254816 BTF3L4Q96K17 158 aa14.62□□□□□ -0.07
TRIM47-201ENST00000254816 MGST1P10620 155 aaKnown RBP14.62□□□□□ -0.07
TRIM47-201ENST00000254816 RPEL1Q2QD12 228 aa14.62□□□□□ -0.07
TRIM47-201ENST00000254816 TOMM20LQ6UXN7 152 aa14.62□□□□□ -0.07
TRIM47-201ENST00000254816 IGLV1-40P01703 118 aa14.61□□□□□ -0.07
TRIM47-201ENST00000254816 TRBV12-3P01733 135 aa14.61□□□□□ -0.07
TRIM47-201ENST00000254816 MYO9AB2RTY4 2548 aa14.61□□□□□ -0.07
TRIM47-201ENST00000254816 IGLV2-8P01709 118 aa14.61□□□□□ -0.07
TRIM47-201ENST00000254816 OR8I2Q8N0Y5 310 aa14.61□□□□□ -0.07
TRIM47-201ENST00000254816 IGF2BP2-AS1Q96M15 143 aa14.61□□□□□ -0.07
TRIM47-201ENST00000254816 ZNF586Q9NXT0 402 aa14.61□□□□□ -0.07
TRIM47-201ENST00000254816 GRIFINA4D1Z8 144 aa14.6□□□□□ -0.07
TRIM47-201ENST00000254816 H3BUA1 57 aa14.6□□□□□ -0.07
TRIM47-201ENST00000254816 SPINK4O60575 86 aa14.6□□□□□ -0.07
TRIM47-201ENST00000254816 TMEM256Q8N2U0 113 aa14.6□□□□□ -0.07
TRIM47-201ENST00000254816 ZFAND3Q9H8U3 227 aa14.6□□□□□ -0.07
TRIM47-201ENST00000254816 ZNF702PQ9H963 129 aa14.6□□□□□ -0.07
TRIM47-201ENST00000254816 TCL1AP56279 114 aa14.59□□□□□ -0.07
TRIM47-201ENST00000254816 C17orf77Q96MU5 243 aa14.59□□□□□ -0.07
TRIM47-201ENST00000254816 SMR3AQ99954 134 aa14.59□□□□□ -0.07
TRIM47-201ENST00000254816 PRSS22Q9GZN4 317 aa14.59□□□□□ -0.07
TRIM47-201ENST00000254816 TMEM14CQ9P0S9 112 aa14.59□□□□□ -0.07
TRIM47-201ENST00000254816 RABAC1Q9UI14 185 aa14.59□□□□□ -0.07
TRIM47-201ENST00000254816 GZMBP10144 247 aa14.59□□□□□ -0.07
TRIM47-201ENST00000254816 RAB9AP51151 201 aa14.59□□□□□ -0.07
TRIM47-201ENST00000254816 BPIFA4PQ86YQ2 179 aa14.59□□□□□ -0.07
TRIM47-201ENST00000254816 TRAV34A0A0B4J273 112 aa14.58□□□□□ -0.08
TRIM47-201ENST00000254816 NUPR1O60356 82 aa14.58□□□□□ -0.08
TRIM47-201ENST00000254816 GNG5P63218 68 aa14.58□□□□□ -0.08
TRIM47-201ENST00000254816 SLC35B1P78383 322 aa14.58□□□□□ -0.08
TRIM47-201ENST00000254816 MRPL18Q9H0U6 180 aaKnown RBP14.58□□□□□ -0.08
TRIM47-201ENST00000254816 PRO1933Q9H354 126 aa14.58□□□□□ -0.08
TRIM47-201ENST00000254816 PGPA6NDG6 321 aa14.58□□□□□ -0.08
TRIM47-201ENST00000254816 BRI3O95415 125 aa14.58□□□□□ -0.08
TRIM47-201ENST00000254816 GCGP01275 180 aa14.58□□□□□ -0.08
TRIM47-201ENST00000254816 ARL3P36405 182 aa14.58□□□□□ -0.08
TRIM47-201ENST00000254816 JOSD1Q15040 202 aaPredicted RBP14.58□□□□□ -0.08
TRIM47-201ENST00000254816 GBGT1Q8N5D6 347 aa14.58□□□□□ -0.08
TRIM47-201ENST00000254816 USMG5Q96IX5 58 aa14.58□□□□□ -0.08
TRIM47-201ENST00000254816 NPFFR1Q9GZQ6 430 aa14.58□□□□□ -0.08
TRIM47-201ENST00000254816 BMPR1BO00238 502 aa14.57□□□□□ -0.08
TRIM47-201ENST00000254816 MRPS12O15235 138 aaKnown RBP14.57□□□□□ -0.08
TRIM47-201ENST00000254816 ZNF207O43670 478 aaKnown RBP14.57□□□□□ -0.08
TRIM47-201ENST00000254816 HIST1H1EP10412 219 aaKnown RBP14.57□□□□□ -0.08
TRIM47-201ENST00000254816 MYCNOSP40205 109 aa14.57□□□□□ -0.08
TRIM47-201ENST00000254816 TEX29Q8N6K0 151 aa14.57□□□□□ -0.08
TRIM47-201ENST00000254816 Q9H3A6 140 aa14.57□□□□□ -0.08
TRIM47-201ENST00000254816 SERTAD4Q9NUC0 356 aa14.57□□□□□ -0.08
TRIM47-201ENST00000254816 RPH3ALQ9UNE2 315 aa14.57□□□□□ -0.08
TRIM47-201ENST00000254816 FAM209BQ5JX69 171 aa14.57□□□□□ -0.08
TRIM47-201ENST00000254816 TMEM18Q96B42 140 aa14.57□□□□□ -0.08
TRIM47-201ENST00000254816 TRAV9-1A0A075B6T8 112 aa14.56□□□□□ -0.08
TRIM47-201ENST00000254816 CA1P00915 261 aaPredicted RBP14.56□□□□□ -0.08
TRIM47-201ENST00000254816 IGLC2P0DOY2 106 aa14.56□□□□□ -0.08
TRIM47-201ENST00000254816 IBA57Q5T440 356 aaKnown RBP14.56□□□□□ -0.08
TRIM47-201ENST00000254816 EXOC3-AS1Q8N2X6 119 aa14.56□□□□□ -0.08
TRIM47-201ENST00000254816 OR4F17Q8NGA8 305 aa14.56□□□□□ -0.08
TRIM47-201ENST00000254816 OR4X2Q8NGF9 303 aa14.56□□□□□ -0.08
TRIM47-201ENST00000254816 OSTCQ9NRP0 149 aa14.56□□□□□ -0.08
TRIM47-201ENST00000254816 ZNF580Q9UK33 172 aa14.56□□□□□ -0.08
TRIM47-201ENST00000254816 IGHV3OR16-13A0A075B7E8 117 aa14.55□□□□□ -0.08
TRIM47-201ENST00000254816 IGHV3-74A0A0B4J1X5 117 aa14.55□□□□□ -0.08
TRIM47-201ENST00000254816 IGHV3-66A0A0C4DH42 116 aa14.55□□□□□ -0.08
TRIM47-201ENST00000254816 CLPSL1A2RUU4 121 aa14.55□□□□□ -0.08
TRIM47-201ENST00000254816 PEX7O00628 323 aa14.55□□□□□ -0.08
TRIM47-201ENST00000254816 IGHG4P01861 327 aa14.55□□□□□ -0.08
TRIM47-201ENST00000254816 SLC25A5P05141 298 aaKnown RBP14.55□□□□□ -0.08
TRIM47-201ENST00000254816 PRB4P10163 310 aaPredicted RBP14.55□□□□□ -0.08
TRIM47-201ENST00000254816 PSMB8P28062 276 aa14.55□□□□□ -0.08
TRIM47-201ENST00000254816 CDC42EP3Q9UKI2 254 aa14.55□□□□□ -0.08
TRIM47-201ENST00000254816 IGHV3-49A0A0A0MS15 119 aa14.55□□□□□ -0.08
TRIM47-201ENST00000254816 SNURFLB1AK76 121 aa14.55□□□□□ -0.08
TRIM47-201ENST00000254816 RELQ04864 619 aaPredicted RBP14.55□□□□□ -0.08
TRIM47-201ENST00000254816 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.54□□□□□ -0.08
TRIM47-201ENST00000254816 ZNF705GA8MUZ8 300 aaPredicted RBP14.54□□□□□ -0.08
TRIM47-201ENST00000254816 ISLRO14498 428 aa14.54□□□□□ -0.08
TRIM47-201ENST00000254816 APOHP02749 345 aaPredicted RBP14.54□□□□□ -0.08
TRIM47-201ENST00000254816 DNLZQ5SXM8 178 aa14.54□□□□□ -0.08
TRIM47-201ENST00000254816 S100A7AQ86SG5 101 aa14.54□□□□□ -0.08
TRIM47-201ENST00000254816 SGK494Q96LW2 274 aa14.54□□□□□ -0.08
TRIM47-201ENST00000254816 TRBV19A0A075B6N1 114 aa14.54□□□□□ -0.08
TRIM47-201ENST00000254816 TP53TG3Q9ULZ0 132 aa14.54□□□□□ -0.08
TRIM47-201ENST00000254816 A0A0G2JLM5 398 aa14.53□□□□□ -0.08
TRIM47-201ENST00000254816 DNAJC9-AS1A6NH13 148 aa14.53□□□□□ -0.08
TRIM47-201ENST00000254816 ATP6V0BQ99437 205 aa14.53□□□□□ -0.08
TRIM47-201ENST00000254816 EPDR1Q9UM22 224 aa14.53□□□□□ -0.08
TRIM47-201ENST00000254816 RPLP1P05386 114 aaKnown RBP14.53□□□□□ -0.08
TRIM47-201ENST00000254816 TAS2R60P59551 318 aa14.53□□□□□ -0.08
TRIM47-201ENST00000254816 MRPL54Q6P161 138 aaKnown RBP14.53□□□□□ -0.08
TRIM47-201ENST00000254816 UNQ9165/PRO28630Q6UXU0 137 aa14.53□□□□□ -0.08
TRIM47-201ENST00000254816 ESM1Q9NQ30 184 aa14.53□□□□□ -0.08
TRIM47-201ENST00000254816 F2Z2F3 143 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms