RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 PQLC2Q6ZP29 291 aa16.98■□□□□ 0.31
APOE-201ENST00000252486 SLC50A1Q9BRV3 221 aa16.98■□□□□ 0.31
APOE-201ENST00000252486 PAXXQ9BUH6 204 aa16.98■□□□□ 0.31
APOE-201ENST00000252486 TUBA4BQ9H853 241 aa16.98■□□□□ 0.31
APOE-201ENST00000252486 CLEC5AQ9NY25 188 aa16.98■□□□□ 0.31
APOE-201ENST00000252486 ZNF253O75346 499 aa16.97■□□□□ 0.31
APOE-201ENST00000252486 DEFB131AP59861 70 aa16.97■□□□□ 0.31
APOE-201ENST00000252486 FAM24BQ8N5W8 94 aa16.97■□□□□ 0.31
APOE-201ENST00000252486 C17orf77Q96MU5 243 aa16.97■□□□□ 0.31
APOE-201ENST00000252486 IGHV4-30-4P0DP06 118 aa16.96■□□□□ 0.31
APOE-201ENST00000252486 NKX2-5P52952 324 aaPredicted RBP16.96■□□□□ 0.31
APOE-201ENST00000252486 PDE6HQ13956 83 aa16.96■□□□□ 0.31
APOE-201ENST00000252486 DEFB121Q5J5C9 76 aa16.96■□□□□ 0.31
APOE-201ENST00000252486 PSMG4Q5JS54 123 aa16.96■□□□□ 0.31
APOE-201ENST00000252486 DEFB125Q8N687 156 aa16.96■□□□□ 0.31
APOE-201ENST00000252486 RAB24Q969Q5 203 aa16.96■□□□□ 0.31
APOE-201ENST00000252486 H3BQ15 152 aa16.95■□□□□ 0.3
APOE-201ENST00000252486 PYYP10082 97 aa16.95■□□□□ 0.3
APOE-201ENST00000252486 RNF141Q8WVD5 230 aa16.95■□□□□ 0.3
APOE-201ENST00000252486 LINC00052Q96N35 136 aa16.95■□□□□ 0.3
APOE-201ENST00000252486 TRBV19A0A075B6N1 114 aa16.94■□□□□ 0.3
APOE-201ENST00000252486 CTXND1A0A1B0GTU2 59 aa16.94■□□□□ 0.3
APOE-201ENST00000252486 NBEAP1P0C6P0 100 aa16.94■□□□□ 0.3
APOE-201ENST00000252486 STAG3L2P0CL84 134 aa16.94■□□□□ 0.3
APOE-201ENST00000252486 STAG3L3P0CL85 134 aa16.94■□□□□ 0.3
APOE-201ENST00000252486 DPPA3Q6W0C5 159 aa16.94■□□□□ 0.3
APOE-201ENST00000252486 TMED6Q8WW62 240 aa16.94■□□□□ 0.3
APOE-201ENST00000252486 SAT2Q96F10 170 aaPredicted RBP16.94■□□□□ 0.3
APOE-201ENST00000252486 WFDC10AQ9H1F0 79 aa16.94■□□□□ 0.3
APOE-201ENST00000252486 SRD5A3Q9H8P0 318 aa16.94■□□□□ 0.3
APOE-201ENST00000252486 ZNF331Q9NQX6 463 aaPredicted RBP16.94■□□□□ 0.3
APOE-201ENST00000252486 ZNF586Q9NXT0 402 aa16.94■□□□□ 0.3
APOE-201ENST00000252486 RAB5CP51148 216 aa16.93■□□□□ 0.3
APOE-201ENST00000252486 UBE2L3P68036 154 aaKnown RBP16.93■□□□□ 0.3
APOE-201ENST00000252486 PSG9Q00887 426 aa16.93■□□□□ 0.3
APOE-201ENST00000252486 APRG1Q8IVJ8 170 aa16.93■□□□□ 0.3
APOE-201ENST00000252486 FXYD5Q96DB9 178 aa16.93■□□□□ 0.3
APOE-201ENST00000252486 CXorf1O96002 111 aa16.92■□□□□ 0.3
APOE-201ENST00000252486 TRAV8-2A0A0B4J237 113 aa16.91■□□□□ 0.3
APOE-201ENST00000252486 PSG3Q16557 428 aa16.91■□□□□ 0.3
APOE-201ENST00000252486 ZNF503Q96F45 646 aa16.91■□□□□ 0.3
APOE-201ENST00000252486 SNRPCP09234 159 aaKnown RBP16.9■□□□□ 0.3
APOE-201ENST00000252486 OR10J4P0C629 311 aa16.9■□□□□ 0.3
APOE-201ENST00000252486 ARL14EPLP0DKL9 152 aa16.9■□□□□ 0.3
APOE-201ENST00000252486 BLNKQ8WV28 456 aa16.9■□□□□ 0.3
APOE-201ENST00000252486 PHYHIPLQ96FC7 376 aa16.9■□□□□ 0.3
APOE-201ENST00000252486 PRELID1Q9Y255 219 aa16.9■□□□□ 0.3
APOE-201ENST00000252486 H3BTX0 84 aa16.89■□□□□ 0.29
APOE-201ENST00000252486 SLC17A3O00476 420 aa16.89■□□□□ 0.29
APOE-201ENST00000252486 HMGB3O15347 200 aaKnown RBP16.89■□□□□ 0.29
APOE-201ENST00000252486 FRMD6-AS1P0C7T7 363 aa16.89■□□□□ 0.29
APOE-201ENST00000252486 FOXI2Q6ZQN5 318 aa16.89■□□□□ 0.29
APOE-201ENST00000252486 STHQ8IWL8 128 aa16.89■□□□□ 0.29
APOE-201ENST00000252486 LYPD1Q8N2G4 141 aa16.89■□□□□ 0.29
APOE-201ENST00000252486 ZNF738Q8NE65 137 aa16.89■□□□□ 0.29
APOE-201ENST00000252486 MRPL53Q96EL3 112 aaKnown RBP16.89■□□□□ 0.29
APOE-201ENST00000252486 CITED4Q96RK1 184 aa16.89■□□□□ 0.29
APOE-201ENST00000252486 AAMDCQ9H7C9 122 aa16.89■□□□□ 0.29
APOE-201ENST00000252486 TMEM167BQ9NRX6 74 aa16.89■□□□□ 0.29
APOE-201ENST00000252486 LOC102724200A0A096LPH7 203 aaPredicted RBP16.88■□□□□ 0.29
APOE-201ENST00000252486 NDUFB4O95168 129 aa16.88■□□□□ 0.29
APOE-201ENST00000252486 ZNF726P1Q15940 193 aa16.88■□□□□ 0.29
APOE-201ENST00000252486 EBLN2Q6P2I7 272 aa16.88■□□□□ 0.29
APOE-201ENST00000252486 FAM213BQ8TBF2 198 aa16.88■□□□□ 0.29
APOE-201ENST00000252486 C20orf173Q96LM9 149 aa16.88■□□□□ 0.29
APOE-201ENST00000252486 EIF3GO75821 320 aaKnown RBP eCLIP16.87■□□□□ 0.29
APOE-201ENST00000252486 GCHFRP30047 84 aa16.87■□□□□ 0.29
APOE-201ENST00000252486 SULT1A2P50226 295 aa16.87■□□□□ 0.29
APOE-201ENST00000252486 ZNF124Q15973 351 aa16.87■□□□□ 0.29
APOE-201ENST00000252486 LINC00322Q6ZN03 302 aaPredicted RBP16.87■□□□□ 0.29
APOE-201ENST00000252486 RNF182Q8N6D2 247 aa16.87■□□□□ 0.29
APOE-201ENST00000252486 SUN5Q8TC36 379 aa16.87■□□□□ 0.29
APOE-201ENST00000252486 SAV1Q9H4B6 383 aaPredicted RBP16.87■□□□□ 0.29
APOE-201ENST00000252486 PLA2G2EQ9NZK7 142 aa16.87■□□□□ 0.29
APOE-201ENST00000252486 MEGF8Q7Z7M0 2845 aa16.87■□□□□ 0.29
APOE-201ENST00000252486 MAP1LC3B2A6NCE7 125 aa16.86■□□□□ 0.29
APOE-201ENST00000252486 RBMY1BA6NDE4 496 aaKnown RBP16.86■□□□□ 0.29
APOE-201ENST00000252486 RBMY1EA6NEQ0 496 aaKnown RBP16.86■□□□□ 0.29
APOE-201ENST00000252486 BOLA2-SMG1P6H3BVE0 249 aa16.86■□□□□ 0.29
APOE-201ENST00000252486 RBMY1DP0C7P1 496 aaKnown RBP16.86■□□□□ 0.29
APOE-201ENST00000252486 HLA-DRB4P13762 266 aa16.86■□□□□ 0.29
APOE-201ENST00000252486 ACTL10Q5JWF8 245 aa16.86■□□□□ 0.29
APOE-201ENST00000252486 IGFL4Q6B9Z1 124 aa16.86■□□□□ 0.29
APOE-201ENST00000252486 SSX7Q7RTT5 188 aa16.86■□□□□ 0.29
APOE-201ENST00000252486 MAP1LC3BQ9GZQ8 125 aa16.86■□□□□ 0.29
APOE-201ENST00000252486 BOLA1Q9Y3E2 137 aa16.86■□□□□ 0.29
APOE-201ENST00000252486 HLA-DRB4X5D2U9 266 aa16.86■□□□□ 0.29
APOE-201ENST00000252486 KNCNA6PVL3 124 aa16.85■□□□□ 0.29
APOE-201ENST00000252486 HLA-DMBP28068 263 aa16.85■□□□□ 0.29
APOE-201ENST00000252486 APOC4P55056 127 aa16.85■□□□□ 0.29
APOE-201ENST00000252486 MBD3L1Q8WWY6 194 aa16.85■□□□□ 0.29
APOE-201ENST00000252486 B9D2Q9BPU9 175 aa16.85■□□□□ 0.29
APOE-201ENST00000252486 KIR2DL5BA0A0G2JN68 375 aa16.84■□□□□ 0.29
APOE-201ENST00000252486 KIR2DL5BA0A0G2JPC4 375 aa16.84■□□□□ 0.29
APOE-201ENST00000252486 A0A0J9YX75 114 aa16.84■□□□□ 0.29
APOE-201ENST00000252486 H3BMM0 161 aa16.84■□□□□ 0.29
APOE-201ENST00000252486 DUSP14O95147 198 aaKnown RBP16.84■□□□□ 0.29
APOE-201ENST00000252486 FHITP49789 147 aa16.84■□□□□ 0.29
APOE-201ENST00000252486 FAM74A1Q5RGS3 127 aa16.84■□□□□ 0.29
APOE-201ENST00000252486 TRPT1Q86TN4 253 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms