RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 ARPC1AQ92747 370 aa12.43□□□□□ -0.42
LRFN1-201ENST00000248668 COX11Q9Y6N1 276 aa12.43□□□□□ -0.42
LRFN1-201ENST00000248668 DOPEY2Q9Y3R5 2298 aa12.42□□□□□ -0.42
LRFN1-201ENST00000248668 K7EP13 123 aa12.42□□□□□ -0.42
LRFN1-201ENST00000248668 GNG7O60262 68 aa12.42□□□□□ -0.42
LRFN1-201ENST00000248668 OR2J3O76001 311 aa12.42□□□□□ -0.42
LRFN1-201ENST00000248668 FCGR2BP31994 310 aaPredicted RBP12.42□□□□□ -0.42
LRFN1-201ENST00000248668 Q56UQ5 140 aa12.42□□□□□ -0.42
LRFN1-201ENST00000248668 SIGLECL1Q8N7X8 197 aa12.42□□□□□ -0.42
LRFN1-201ENST00000248668 IGLC2P0DOY2 106 aa12.42□□□□□ -0.42
LRFN1-201ENST00000248668 IGLC3P0DOY3 106 aa12.42□□□□□ -0.42
LRFN1-201ENST00000248668 TMEM136Q6ZRR5 245 aa12.42□□□□□ -0.42
LRFN1-201ENST00000248668 GOLT1AQ6ZVE7 132 aa12.42□□□□□ -0.42
LRFN1-201ENST00000248668 TCF24Q7RTU0 167 aa12.42□□□□□ -0.42
LRFN1-201ENST00000248668 SSBP4Q9BWG4 385 aaPredicted RBP12.42□□□□□ -0.42
LRFN1-201ENST00000248668 GNB4Q9HAV0 340 aa12.41□□□□□ -0.42
LRFN1-201ENST00000248668 UQCR10Q9UDW1 63 aa12.41□□□□□ -0.42
LRFN1-201ENST00000248668 SAP30O75446 220 aa12.41□□□□□ -0.42
LRFN1-201ENST00000248668 NDUFA3O95167 84 aa12.41□□□□□ -0.42
LRFN1-201ENST00000248668 AMTP48728 403 aa12.41□□□□□ -0.42
LRFN1-201ENST00000248668 NPBQ8NG41 125 aa12.41□□□□□ -0.42
LRFN1-201ENST00000248668 FASNP49327 2511 aaKnown RBP12.41□□□□□ -0.42
LRFN1-201ENST00000248668 SMIM27A0A1W2PRY6 76 aa12.41□□□□□ -0.42
LRFN1-201ENST00000248668 TCRAP04437 139 aa12.41□□□□□ -0.42
LRFN1-201ENST00000248668 SRIP30626 198 aa12.41□□□□□ -0.42
LRFN1-201ENST00000248668 PAFAH1B2P68402 229 aa12.41□□□□□ -0.42
LRFN1-201ENST00000248668 LCN12Q6JVE5 192 aa12.41□□□□□ -0.42
LRFN1-201ENST00000248668 PRNTQ86SH4 94 aa12.41□□□□□ -0.42
LRFN1-201ENST00000248668 OR4B1Q8NGF8 309 aa12.41□□□□□ -0.42
LRFN1-201ENST00000248668 FANCD2OSQ96PS1 177 aa12.41□□□□□ -0.42
LRFN1-201ENST00000248668 TBL2Q9Y4P3 447 aaKnown RBP12.41□□□□□ -0.42
LRFN1-201ENST00000248668 OR2T8A6NH00 312 aa12.4□□□□□ -0.42
LRFN1-201ENST00000248668 CIARTQ8N365 385 aaPredicted RBP12.4□□□□□ -0.42
LRFN1-201ENST00000248668 C5orf17Q8NAS9 161 aa12.4□□□□□ -0.42
LRFN1-201ENST00000248668 NUP35Q8NFH5 326 aa12.4□□□□□ -0.42
LRFN1-201ENST00000248668 RNF125Q96EQ8 232 aa12.4□□□□□ -0.42
LRFN1-201ENST00000248668 TRAV9-1A0A075B6T8 112 aa12.4□□□□□ -0.42
LRFN1-201ENST00000248668 HIGD1CA8MV81 97 aa12.4□□□□□ -0.42
LRFN1-201ENST00000248668 ECSCRQ19T08 205 aa12.4□□□□□ -0.42
LRFN1-201ENST00000248668 FAM19A2Q8N3H0 131 aa12.4□□□□□ -0.42
LRFN1-201ENST00000248668 Q8N976 141 aa12.4□□□□□ -0.42
LRFN1-201ENST00000248668 ZNF331Q9NQX6 463 aaPredicted RBP12.4□□□□□ -0.42
LRFN1-201ENST00000248668 EFNA4P52798 201 aa12.39□□□□□ -0.43
LRFN1-201ENST00000248668 SLAQ13239 276 aa12.39□□□□□ -0.43
LRFN1-201ENST00000248668 ZNF491Q8N8L2 437 aa12.39□□□□□ -0.43
LRFN1-201ENST00000248668 GPR82Q96P67 336 aa12.39□□□□□ -0.43
LRFN1-201ENST00000248668 RCHY1Q96PM5 261 aa12.39□□□□□ -0.43
LRFN1-201ENST00000248668 GNB1LQ9BYB4 327 aa12.39□□□□□ -0.43
LRFN1-201ENST00000248668 AMY1AP04745 511 aa12.39□□□□□ -0.43
LRFN1-201ENST00000248668 CTRLP40313 264 aa12.39□□□□□ -0.43
LRFN1-201ENST00000248668 M0R3E3 92 aa12.39□□□□□ -0.43
LRFN1-201ENST00000248668 PLP1P60201 277 aa12.39□□□□□ -0.43
LRFN1-201ENST00000248668 CCDC144NLQ6NUI1 221 aa12.39□□□□□ -0.43
LRFN1-201ENST00000248668 TMUB1Q9BVT8 246 aa12.39□□□□□ -0.43
LRFN1-201ENST00000248668 SIRPDQ9H106 197 aa12.39□□□□□ -0.43
LRFN1-201ENST00000248668 MRPL27Q9P0M9 148 aaKnown RBP12.39□□□□□ -0.43
LRFN1-201ENST00000248668 IZUMO1RA6ND01 250 aa12.38□□□□□ -0.43
LRFN1-201ENST00000248668 SAA4P35542 130 aa12.38□□□□□ -0.43
LRFN1-201ENST00000248668 ZNF562Q6V9R5 426 aa12.38□□□□□ -0.43
LRFN1-201ENST00000248668 NRN1Q9NPD7 142 aa12.38□□□□□ -0.43
LRFN1-201ENST00000248668 VWC2LB2RUY7 222 aa12.38□□□□□ -0.43
LRFN1-201ENST00000248668 BMPR1BO00238 502 aa12.38□□□□□ -0.43
LRFN1-201ENST00000248668 GDF5OSQ5U4N7 250 aa12.38□□□□□ -0.43
LRFN1-201ENST00000248668 AMMECR1LQ6DCA0 310 aa12.38□□□□□ -0.43
LRFN1-201ENST00000248668 K7ERU9 68 aa12.38□□□□□ -0.43
LRFN1-201ENST00000248668 ZNF253O75346 499 aa12.38□□□□□ -0.43
LRFN1-201ENST00000248668 HIST1H1EP10412 219 aaKnown RBP12.38□□□□□ -0.43
LRFN1-201ENST00000248668 OR2D3Q8NGH3 330 aa12.38□□□□□ -0.43
LRFN1-201ENST00000248668 TSPOP30536 169 aa12.37□□□□□ -0.43
LRFN1-201ENST00000248668 IGHV2-70DA0A0C4DH43 119 aa12.37□□□□□ -0.43
LRFN1-201ENST00000248668 APCSP02743 223 aa12.37□□□□□ -0.43
LRFN1-201ENST00000248668 WDR73Q6P4I2 378 aa12.37□□□□□ -0.43
LRFN1-201ENST00000248668 BPIFA4PQ86YQ2 179 aa12.37□□□□□ -0.43
LRFN1-201ENST00000248668 GRAMD2BQ96HH9 432 aa12.37□□□□□ -0.43
LRFN1-201ENST00000248668 SHANK2-AS3Q9BTD1 123 aa12.37□□□□□ -0.43
LRFN1-201ENST00000248668 C7orf69Q9H7B7 122 aa12.37□□□□□ -0.43
LRFN1-201ENST00000248668 IGLV11-55A0A075B6I3 123 aa12.36□□□□□ -0.43
LRFN1-201ENST00000248668 TOMM40O96008 361 aa12.36□□□□□ -0.43
LRFN1-201ENST00000248668 OR4F17Q8NGA8 305 aa12.36□□□□□ -0.43
LRFN1-201ENST00000248668 MBD6Q96DN6 1003 aa12.36□□□□□ -0.43
LRFN1-201ENST00000248668 PGLYRP4Q96LB8 373 aa12.36□□□□□ -0.43
LRFN1-201ENST00000248668 C21orf62Q9NYP8 219 aa12.36□□□□□ -0.43
LRFN1-201ENST00000248668 IGHV7-81A0A0B4J1V7 117 aa12.36□□□□□ -0.43
LRFN1-201ENST00000248668 LINC01548A6NM66 108 aa12.36□□□□□ -0.43
LRFN1-201ENST00000248668 HLA-DRB1P01911 266 aa12.36□□□□□ -0.43
LRFN1-201ENST00000248668 GPX1P07203 203 aa12.36□□□□□ -0.43
LRFN1-201ENST00000248668 BMI1P35226 326 aa12.36□□□□□ -0.43
LRFN1-201ENST00000248668 MFAP4P55083 255 aa12.36□□□□□ -0.43
LRFN1-201ENST00000248668 LMO4P61968 165 aa12.36□□□□□ -0.43
LRFN1-201ENST00000248668 IGFL4Q6B9Z1 124 aa12.36□□□□□ -0.43
LRFN1-201ENST00000248668 TIMM8BQ9Y5J9 83 aaPredicted RBP12.36□□□□□ -0.43
LRFN1-201ENST00000248668 DOPEY1Q5JWR5 2465 aa12.36□□□□□ -0.43
LRFN1-201ENST00000248668 P01737 135 aa12.36□□□□□ -0.43
LRFN1-201ENST00000248668 TMEM219Q86XT9 240 aa12.36□□□□□ -0.43
LRFN1-201ENST00000248668 DAZAP1Q96EP5 407 aaKnown RBP12.36□□□□□ -0.43
LRFN1-201ENST00000248668 F8W735 103 aaPredicted RBP12.35□□□□□ -0.43
LRFN1-201ENST00000248668 H3BRN7 92 aa12.35□□□□□ -0.43
LRFN1-201ENST00000248668 PPBPP02775 128 aa12.35□□□□□ -0.43
LRFN1-201ENST00000248668 OTORQ9NRC9 128 aa12.35□□□□□ -0.43
LRFN1-201ENST00000248668 CLEC5AQ9NY25 188 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms