RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 MRPS16Q9Y3D3 137 aaKnown RBP17.22■□□□□ 0.35
RNF39-201ENST00000244360 BPIFA4PQ86YQ2 179 aa17.21■□□□□ 0.35
RNF39-201ENST00000244360 PGLYRP4Q96LB8 373 aa17.21■□□□□ 0.35
RNF39-201ENST00000244360 ZFP30Q9Y2G7 519 aa17.21■□□□□ 0.35
RNF39-201ENST00000244360 ITPR1Q14643 2758 aa17.2■□□□□ 0.34
RNF39-201ENST00000244360 TRBV19A0A075B6N1 114 aa17.2■□□□□ 0.34
RNF39-201ENST00000244360 NCBP2LA6PVI3 153 aaKnown RBP17.2■□□□□ 0.34
RNF39-201ENST00000244360 F8W735 103 aaPredicted RBP17.2■□□□□ 0.34
RNF39-201ENST00000244360 UQCRFS1P47985 274 aa17.2■□□□□ 0.34
RNF39-201ENST00000244360 MFAP4P55083 255 aa17.2■□□□□ 0.34
RNF39-201ENST00000244360 TMEM70Q9BUB7 260 aa17.2■□□□□ 0.34
RNF39-201ENST00000244360 MRPS12O15235 138 aaKnown RBP17.2■□□□□ 0.34
RNF39-201ENST00000244360 TMEM11P17152 192 aa17.2■□□□□ 0.34
RNF39-201ENST00000244360 COL8A1P27658 744 aa17.2■□□□□ 0.34
RNF39-201ENST00000244360 LCN12Q6JVE5 192 aa17.2■□□□□ 0.34
RNF39-201ENST00000244360 AJUBAQ96IF1 538 aa17.2■□□□□ 0.34
RNF39-201ENST00000244360 NDFIP1Q9BT67 221 aa17.2■□□□□ 0.34
RNF39-201ENST00000244360 IGLV2-11P01706 119 aa17.19■□□□□ 0.34
RNF39-201ENST00000244360 IL4P05112 153 aa17.19■□□□□ 0.34
RNF39-201ENST00000244360 UBE2E1P51965 193 aa17.19■□□□□ 0.34
RNF39-201ENST00000244360 LMO4P61968 165 aa17.19■□□□□ 0.34
RNF39-201ENST00000244360 Q56UQ5 140 aa17.19■□□□□ 0.34
RNF39-201ENST00000244360 C19orf84I3L1E1 186 aa17.19■□□□□ 0.34
RNF39-201ENST00000244360 HAX1O00165 279 aa17.19■□□□□ 0.34
RNF39-201ENST00000244360 CHEK1O14757 476 aa17.19■□□□□ 0.34
RNF39-201ENST00000244360 GNG7O60262 68 aa17.19■□□□□ 0.34
RNF39-201ENST00000244360 C16orf54Q6UWD8 224 aa17.19■□□□□ 0.34
RNF39-201ENST00000244360 LYPD1Q8N2G4 141 aa17.19■□□□□ 0.34
RNF39-201ENST00000244360 EXOC3-AS1Q8N2X6 119 aa17.19■□□□□ 0.34
RNF39-201ENST00000244360 OR4F17Q8NGA8 305 aa17.19■□□□□ 0.34
RNF39-201ENST00000244360 URB1-AS1Q96HZ7 61 aa17.19■□□□□ 0.34
RNF39-201ENST00000244360 CRXO43186 299 aaPredicted RBP17.18■□□□□ 0.34
RNF39-201ENST00000244360 TOX4O94842 621 aa17.18■□□□□ 0.34
RNF39-201ENST00000244360 EGR2P11161 476 aaPredicted RBP17.18■□□□□ 0.34
RNF39-201ENST00000244360 GNLYP22749 145 aa17.18■□□□□ 0.34
RNF39-201ENST00000244360 TSPOP30536 169 aa17.18■□□□□ 0.34
RNF39-201ENST00000244360 ATOH7Q8N100 152 aa17.18■□□□□ 0.34
RNF39-201ENST00000244360 HLA-DRB1P01911 266 aa17.17■□□□□ 0.34
RNF39-201ENST00000244360 FOXA3P55318 350 aaPredicted RBP17.17■□□□□ 0.34
RNF39-201ENST00000244360 SIGLEC15Q6ZMC9 328 aa17.17■□□□□ 0.34
RNF39-201ENST00000244360 Q8N9W7 124 aa17.17■□□□□ 0.34
RNF39-201ENST00000244360 TMEM75Q8N9X5 138 aa17.17■□□□□ 0.34
RNF39-201ENST00000244360 LOC102724200A0A096LPH7 203 aaPredicted RBP17.17■□□□□ 0.34
RNF39-201ENST00000244360 IGHV7-81A0A0B4J1V7 117 aa17.17■□□□□ 0.34
RNF39-201ENST00000244360 S100A7AQ86SG5 101 aa17.17■□□□□ 0.34
RNF39-201ENST00000244360 C21orf62Q9NYP8 219 aa17.17■□□□□ 0.34
RNF39-201ENST00000244360 S4R3C0 116 aa17.17■□□□□ 0.34
RNF39-201ENST00000244360 K7EQM0 130 aa17.16■□□□□ 0.34
RNF39-201ENST00000244360 OVOL3O00110 214 aa17.16■□□□□ 0.34
RNF39-201ENST00000244360 FAM120AOSQ5T036 256 aa17.16■□□□□ 0.34
RNF39-201ENST00000244360 OR5AL1P0C617 328 aa17.16■□□□□ 0.34
RNF39-201ENST00000244360 FAM106CPP0CH98 169 aa17.16■□□□□ 0.34
RNF39-201ENST00000244360 GOLT1AQ6ZVE7 132 aa17.16■□□□□ 0.34
RNF39-201ENST00000244360 PRNTQ86SH4 94 aa17.16■□□□□ 0.34
RNF39-201ENST00000244360 BPESC1Q9GZL8 116 aa17.16■□□□□ 0.34
RNF39-201ENST00000244360 THYN1Q9P016 225 aa17.16■□□□□ 0.34
RNF39-201ENST00000244360 NPSP0C0P6 89 aa17.15■□□□□ 0.34
RNF39-201ENST00000244360 CIARTQ8N365 385 aaPredicted RBP17.15■□□□□ 0.34
RNF39-201ENST00000244360 C17orf77Q96MU5 243 aa17.15■□□□□ 0.34
RNF39-201ENST00000244360 TRAV8-1A0A0A6YYK1 113 aa17.15■□□□□ 0.34
RNF39-201ENST00000244360 NDUFB8O95169 186 aa17.15■□□□□ 0.34
RNF39-201ENST00000244360 ZNF414Q96IQ9 312 aa17.15■□□□□ 0.34
RNF39-201ENST00000244360 IGHV1-24A0A0C4DH33 117 aa17.14■□□□□ 0.33
RNF39-201ENST00000244360 A0A1B0GW15 77 aa17.14■□□□□ 0.33
RNF39-201ENST00000244360 FCGR2BP31994 310 aaPredicted RBP17.14■□□□□ 0.33
RNF39-201ENST00000244360 KLK9Q2XQG4 91 aa17.14■□□□□ 0.33
RNF39-201ENST00000244360 STPG4Q8N801 248 aa17.14■□□□□ 0.33
RNF39-201ENST00000244360 KLK9Q9UKQ9 250 aa17.14■□□□□ 0.33
RNF39-201ENST00000244360 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.13■□□□□ 0.33
RNF39-201ENST00000244360 LEPROTL1O95214 131 aa17.13■□□□□ 0.33
RNF39-201ENST00000244360 APOHP02749 345 aaPredicted RBP17.13■□□□□ 0.33
RNF39-201ENST00000244360 TFPI2P48307 235 aa17.13■□□□□ 0.33
RNF39-201ENST00000244360 MAJINQ3KP22 176 aa17.13■□□□□ 0.33
RNF39-201ENST00000244360 IGLL1P15814 213 aa17.13■□□□□ 0.33
RNF39-201ENST00000244360 PDE6HQ13956 83 aa17.13■□□□□ 0.33
RNF39-201ENST00000244360 BCL6BQ8N143 479 aaPredicted RBP17.13■□□□□ 0.33
RNF39-201ENST00000244360 GATD1Q8NB37 220 aa17.13■□□□□ 0.33
RNF39-201ENST00000244360 ST20Q9HBF5 79 aa17.13■□□□□ 0.33
RNF39-201ENST00000244360 CLEC5AQ9NY25 188 aa17.13■□□□□ 0.33
RNF39-201ENST00000244360 SAA4P35542 130 aa17.12■□□□□ 0.33
RNF39-201ENST00000244360 RIGQ13278 110 aa17.12■□□□□ 0.33
RNF39-201ENST00000244360 Q6AWC8 147 aa17.12■□□□□ 0.33
RNF39-201ENST00000244360 SYS1-DBNDD2H3BUS1 97 aa17.12■□□□□ 0.33
RNF39-201ENST00000244360 PPP1R14DQ9NXH3 145 aa17.12■□□□□ 0.33
RNF39-201ENST00000244360 A0A1B0GUT8 65 aa17.11■□□□□ 0.33
RNF39-201ENST00000244360 OR4C46A6NHA9 309 aa17.11■□□□□ 0.33
RNF39-201ENST00000244360 FAM110DQ8TAY7 271 aaPredicted RBP17.11■□□□□ 0.33
RNF39-201ENST00000244360 ORAOV1Q8WV07 137 aa17.11■□□□□ 0.33
RNF39-201ENST00000244360 ZNF785A8K8V0 405 aa17.11■□□□□ 0.33
RNF39-201ENST00000244360 TMEM191AQ9H0A3 160 aa17.11■□□□□ 0.33
RNF39-201ENST00000244360 WNK2Q9Y3S1 2297 aa17.1■□□□□ 0.33
RNF39-201ENST00000244360 PSG3Q16557 428 aa17.1■□□□□ 0.33
RNF39-201ENST00000244360 SCGB2A1O75556 95 aa17.09■□□□□ 0.33
RNF39-201ENST00000244360 CTSGP08311 255 aa17.09■□□□□ 0.33
RNF39-201ENST00000244360 Q71RC1 249 aaPredicted RBP17.09■□□□□ 0.33
RNF39-201ENST00000244360 SPATA12Q7Z6I5 190 aa17.09■□□□□ 0.33
RNF39-201ENST00000244360 ZC2HC1AQ96GY0 325 aa17.09■□□□□ 0.33
RNF39-201ENST00000244360 HSPB8Q9UJY1 196 aa17.09■□□□□ 0.33
RNF39-201ENST00000244360 PSG8Q9UQ74 426 aa17.09■□□□□ 0.33
RNF39-201ENST00000244360 PET117Q6UWS5 81 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms