RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 BPIFA4PQ86YQ2 179 aa13.26□□□□□ -0.29
SSPN-201ENST00000242729 OR4F17Q8NGA8 305 aa13.26□□□□□ -0.29
SSPN-201ENST00000242729 CHRDL1Q9BU40 450 aa13.26□□□□□ -0.29
SSPN-201ENST00000242729 IGHV3-66A0A0C4DH42 116 aa13.25□□□□□ -0.29
SSPN-201ENST00000242729 CRIP1P50238 77 aa13.25□□□□□ -0.29
SSPN-201ENST00000242729 Q8TAT8 98 aa13.25□□□□□ -0.29
SSPN-201ENST00000242729 CENPEQ02224 2701 aa13.25□□□□□ -0.29
SSPN-201ENST00000242729 IGKV2-40A0A087WW87 121 aaPredicted RBP13.25□□□□□ -0.29
SSPN-201ENST00000242729 LOC389332A0A1B0GUA5 103 aa13.25□□□□□ -0.29
SSPN-201ENST00000242729 SERTM2A0A1B0GWG4 89 aa13.25□□□□□ -0.29
SSPN-201ENST00000242729 IGKV2D-40P01614 121 aaPredicted RBP13.25□□□□□ -0.29
SSPN-201ENST00000242729 PVRIGQ6DKI7 326 aa13.25□□□□□ -0.29
SSPN-201ENST00000242729 UQCR10Q9UDW1 63 aa13.25□□□□□ -0.29
SSPN-201ENST00000242729 LOC105371242A0A075B767 164 aa13.24□□□□□ -0.29
SSPN-201ENST00000242729 SHANK2-AS3Q9BTD1 123 aa13.24□□□□□ -0.29
SSPN-201ENST00000242729 ADORA2A-AS1P86434 159 aa13.24□□□□□ -0.29
SSPN-201ENST00000242729 SIGLEC15Q6ZMC9 328 aa13.24□□□□□ -0.29
SSPN-201ENST00000242729 CFHR4Q92496 578 aa13.24□□□□□ -0.29
SSPN-201ENST00000242729 PSG8Q9UQ74 426 aa13.24□□□□□ -0.29
SSPN-201ENST00000242729 PLP1P60201 277 aa13.23□□□□□ -0.29
SSPN-201ENST00000242729 RASL11AQ6T310 242 aa13.23□□□□□ -0.29
SSPN-201ENST00000242729 TMUB1Q9BVT8 246 aa13.23□□□□□ -0.29
SSPN-201ENST00000242729 FAM106CPP0CH98 169 aa13.23□□□□□ -0.29
SSPN-201ENST00000242729 ZFP36P26651 326 aaKnown RBP13.23□□□□□ -0.29
SSPN-201ENST00000242729 KLF5Q13887 457 aaPredicted RBP13.23□□□□□ -0.29
SSPN-201ENST00000242729 FAM106AQ4KMX7 169 aa13.23□□□□□ -0.29
SSPN-201ENST00000242729 FAM120AOSQ5T036 256 aa13.23□□□□□ -0.29
SSPN-201ENST00000242729 LAMTOR2Q9Y2Q5 125 aa13.23□□□□□ -0.29
SSPN-201ENST00000242729 LOC102724200A0A096LPH7 203 aaPredicted RBP13.22□□□□□ -0.29
SSPN-201ENST00000242729 IGHV3-49A0A0A0MS15 119 aa13.22□□□□□ -0.29
SSPN-201ENST00000242729 A0A1W2PPR1 153 aa13.22□□□□□ -0.29
SSPN-201ENST00000242729 NDUFB8O95169 186 aa13.22□□□□□ -0.29
SSPN-201ENST00000242729 ATP5L2Q7Z4Y8 100 aa13.22□□□□□ -0.29
SSPN-201ENST00000242729 FANCD2OSQ96PS1 177 aa13.22□□□□□ -0.29
SSPN-201ENST00000242729 RAB1BQ9H0U4 201 aa13.22□□□□□ -0.29
SSPN-201ENST00000242729 OR4C46A6NHA9 309 aa13.22□□□□□ -0.29
SSPN-201ENST00000242729 SNAI2O43623 268 aa13.22□□□□□ -0.29
SSPN-201ENST00000242729 LEPROTL1O95214 131 aa13.22□□□□□ -0.29
SSPN-201ENST00000242729 UNQ5815/PRO19632Q6UWF5 114 aa13.22□□□□□ -0.29
SSPN-201ENST00000242729 VMO1Q7Z5L0 202 aa13.22□□□□□ -0.29
SSPN-201ENST00000242729 TMEM213A2RRL7 107 aa13.21□□□□□ -0.29
SSPN-201ENST00000242729 H3BRN7 92 aa13.21□□□□□ -0.29
SSPN-201ENST00000242729 M0QZK8 103 aa13.21□□□□□ -0.29
SSPN-201ENST00000242729 LINC00614P0C842 121 aa13.21□□□□□ -0.29
SSPN-201ENST00000242729 C5orf64Q2M2E5 130 aa13.21□□□□□ -0.29
SSPN-201ENST00000242729 ZNF414Q96IQ9 312 aa13.21□□□□□ -0.29
SSPN-201ENST00000242729 TMEM70Q9BUB7 260 aa13.21□□□□□ -0.29
SSPN-201ENST00000242729 CUBNO60494 3623 aa13.21□□□□□ -0.29
SSPN-201ENST00000242729 DLEU1O43261 78 aa13.21□□□□□ -0.29
SSPN-201ENST00000242729 TSPOP30536 169 aa13.21□□□□□ -0.29
SSPN-201ENST00000242729 TMEM75Q8N9X5 138 aa13.21□□□□□ -0.29
SSPN-201ENST00000242729 TIMD4Q96H15 378 aa13.21□□□□□ -0.29
SSPN-201ENST00000242729 GOLT1BQ9Y3E0 138 aa13.21□□□□□ -0.29
SSPN-201ENST00000242729 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.2□□□□□ -0.3
SSPN-201ENST00000242729 ARPC1AQ92747 370 aa13.2□□□□□ -0.3
SSPN-201ENST00000242729 FLNCQ14315 2725 aa13.2□□□□□ -0.3
SSPN-201ENST00000242729 DMRTA1Q5VZB9 504 aa13.2□□□□□ -0.3
SSPN-201ENST00000242729 ZNF492Q9P255 531 aa13.2□□□□□ -0.3
SSPN-201ENST00000242729 IGHV3OR16-10A0A075B7F0 116 aa13.2□□□□□ -0.3
SSPN-201ENST00000242729 TRAV9-2A0A087WT02 112 aa13.2□□□□□ -0.3
SSPN-201ENST00000242729 ECSCRQ19T08 205 aa13.2□□□□□ -0.3
SSPN-201ENST00000242729 COL5A1-AS1Q5SY13 56 aa13.2□□□□□ -0.3
SSPN-201ENST00000242729 C1RLQ9NZP8 487 aa13.2□□□□□ -0.3
SSPN-201ENST00000242729 A0A1B0GUT8 65 aa13.19□□□□□ -0.3
SSPN-201ENST00000242729 F8W735 103 aaPredicted RBP13.19□□□□□ -0.3
SSPN-201ENST00000242729 LOXL1Q08397 574 aaPredicted RBP13.19□□□□□ -0.3
SSPN-201ENST00000242729 PSG3Q16557 428 aa13.19□□□□□ -0.3
SSPN-201ENST00000242729 LY6G5BQ8NDX9 201 aa13.19□□□□□ -0.3
SSPN-201ENST00000242729 TMEM14CQ9P0S9 112 aa13.19□□□□□ -0.3
SSPN-201ENST00000242729 SMKR1H3BMG3 65 aa13.19□□□□□ -0.3
SSPN-201ENST00000242729 ZNF207O43670 478 aaKnown RBP13.19□□□□□ -0.3
SSPN-201ENST00000242729 APOHP02749 345 aaPredicted RBP13.19□□□□□ -0.3
SSPN-201ENST00000242729 NPIPB5A8MRT5 1133 aa13.18□□□□□ -0.3
SSPN-201ENST00000242729 LY6DQ14210 128 aa13.18□□□□□ -0.3
SSPN-201ENST00000242729 SELENOKQ9Y6D0 94 aa13.18□□□□□ -0.3
SSPN-201ENST00000242729 SYS1-DBNDD2H3BUS1 97 aa13.18□□□□□ -0.3
SSPN-201ENST00000242729 OVOL3O00110 214 aa13.18□□□□□ -0.3
SSPN-201ENST00000242729 TCF21O43680 179 aa13.18□□□□□ -0.3
SSPN-201ENST00000242729 WFDC3Q8IUB2 231 aa13.18□□□□□ -0.3
SSPN-201ENST00000242729 KLHDC1Q8N7A1 406 aa13.18□□□□□ -0.3
SSPN-201ENST00000242729 C21orf62Q9NYP8 219 aa13.18□□□□□ -0.3
SSPN-201ENST00000242729 LINC00527Q9UJ94 153 aa13.18□□□□□ -0.3
SSPN-201ENST00000242729 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.18□□□□□ -0.3
SSPN-201ENST00000242729 LINC01548A6NM66 108 aa13.17□□□□□ -0.3
SSPN-201ENST00000242729 PPIFP30405 207 aaKnown RBP13.17□□□□□ -0.3
SSPN-201ENST00000242729 CEACAM3P40198 252 aa13.17□□□□□ -0.3
SSPN-201ENST00000242729 LYZL1Q6UWQ5 148 aa13.17□□□□□ -0.3
SSPN-201ENST00000242729 OR11H6Q8NGC7 330 aa13.17□□□□□ -0.3
SSPN-201ENST00000242729 VGLL1Q99990 258 aa13.17□□□□□ -0.3
SSPN-201ENST00000242729 NPIPB6E9PJ23 425 aa13.17□□□□□ -0.3
SSPN-201ENST00000242729 TMEM11P17152 192 aa13.17□□□□□ -0.3
SSPN-201ENST00000242729 GPR183P32249 361 aa13.17□□□□□ -0.3
SSPN-201ENST00000242729 MFAP4P55083 255 aa13.17□□□□□ -0.3
SSPN-201ENST00000242729 FOXE3Q13461 319 aa13.17□□□□□ -0.3
SSPN-201ENST00000242729 AMN1Q8IY45 258 aa13.17□□□□□ -0.3
SSPN-201ENST00000242729 RNF182Q8N6D2 247 aa13.17□□□□□ -0.3
SSPN-201ENST00000242729 AAMDCQ9H7C9 122 aa13.17□□□□□ -0.3
SSPN-201ENST00000242729 CFAP46Q8IYW2 2715 aa13.17□□□□□ -0.3
SSPN-201ENST00000242729 K7EQM0 130 aa13.16□□□□□ -0.3
SSPN-201ENST00000242729 MRPS12O15235 138 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms