RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 SAP30O75446 220 aa12.24□□□□□ -0.45
DDX55-201ENST00000238146 LGALS9BQ3B8N2 356 aa12.24□□□□□ -0.45
DDX55-201ENST00000238146 LGALS9CQ6DKI2 356 aa12.24□□□□□ -0.45
DDX55-201ENST00000238146 OR1N2Q8NGR9 330 aa12.24□□□□□ -0.45
DDX55-201ENST00000238146 C8orf49Q96NF6 230 aa12.24□□□□□ -0.45
DDX55-201ENST00000238146 IGHV1-3A0A0C4DH29 117 aa12.24□□□□□ -0.45
DDX55-201ENST00000238146 C9orf118A6NHY6 69 aa12.24□□□□□ -0.45
DDX55-201ENST00000238146 H3BRM9 83 aa12.24□□□□□ -0.45
DDX55-201ENST00000238146 MAP1BP46821 2468 aaKnown RBP12.24□□□□□ -0.45
DDX55-201ENST00000238146 BSPH1Q075Z2 132 aa12.24□□□□□ -0.45
DDX55-201ENST00000238146 LYZL1Q6UWQ5 148 aa12.24□□□□□ -0.45
DDX55-201ENST00000238146 LYPD1Q8N2G4 141 aa12.24□□□□□ -0.45
DDX55-201ENST00000238146 JMJD8Q96S16 334 aa12.24□□□□□ -0.45
DDX55-201ENST00000238146 KAAG1Q9UBP8 84 aa12.24□□□□□ -0.45
DDX55-201ENST00000238146 U3KQK5 164 aa12.24□□□□□ -0.45
DDX55-201ENST00000238146 IGLV1-47P01700 117 aa12.23□□□□□ -0.45
DDX55-201ENST00000238146 TCTAP57738 103 aa12.23□□□□□ -0.45
DDX55-201ENST00000238146 FXYD7P58549 80 aa12.23□□□□□ -0.45
DDX55-201ENST00000238146 FAM104BQ5XKR9 115 aa12.23□□□□□ -0.45
DDX55-201ENST00000238146 AMN1Q8IY45 258 aa12.23□□□□□ -0.45
DDX55-201ENST00000238146 PRELID3AQ96N28 172 aa12.23□□□□□ -0.45
DDX55-201ENST00000238146 MEGF9Q9H1U4 602 aa12.23□□□□□ -0.45
DDX55-201ENST00000238146 MRPS12O15235 138 aaKnown RBP12.23□□□□□ -0.45
DDX55-201ENST00000238146 CACNG7P62955 275 aa12.23□□□□□ -0.45
DDX55-201ENST00000238146 TMEM190Q8WZ59 177 aa12.23□□□□□ -0.45
DDX55-201ENST00000238146 ZNF414Q96IQ9 312 aa12.23□□□□□ -0.45
DDX55-201ENST00000238146 SELENOKQ9Y6D0 94 aa12.23□□□□□ -0.45
DDX55-201ENST00000238146 A6NDN8 102 aa12.22□□□□□ -0.45
DDX55-201ENST00000238146 K7EM74 188 aa12.22□□□□□ -0.45
DDX55-201ENST00000238146 ZNF491Q8N8L2 437 aa12.22□□□□□ -0.45
DDX55-201ENST00000238146 KALRNO60229 2985 aa12.22□□□□□ -0.45
DDX55-201ENST00000238146 TMSB15BA0A087X1C1 80 aa12.22□□□□□ -0.45
DDX55-201ENST00000238146 H3BUT2 72 aa12.22□□□□□ -0.45
DDX55-201ENST00000238146 K7EIM0 57 aa12.22□□□□□ -0.45
DDX55-201ENST00000238146 SMAD7O15105 426 aaKnown RBP12.22□□□□□ -0.45
DDX55-201ENST00000238146 GTF2H5Q6ZYL4 71 aa12.22□□□□□ -0.45
DDX55-201ENST00000238146 ORMDL3Q8N138 153 aa12.22□□□□□ -0.45
DDX55-201ENST00000238146 FER1L6-AS1Q8NA97 138 aa12.22□□□□□ -0.45
DDX55-201ENST00000238146 TNFRSF14Q92956 283 aa12.22□□□□□ -0.45
DDX55-201ENST00000238146 AP1S3Q96PC3 154 aa12.22□□□□□ -0.45
DDX55-201ENST00000238146 THYN1Q9P016 225 aa12.22□□□□□ -0.45
DDX55-201ENST00000238146 HILPDAQ9Y5L2 63 aa12.22□□□□□ -0.45
DDX55-201ENST00000238146 LAMA5O15230 3695 aa12.21□□□□□ -0.45
DDX55-201ENST00000238146 C16orf97H3BN30 126 aa12.21□□□□□ -0.45
DDX55-201ENST00000238146 CT45A10P0DMU9 189 aa12.21□□□□□ -0.45
DDX55-201ENST00000238146 PAX8Q06710 450 aa12.21□□□□□ -0.45
DDX55-201ENST00000238146 NAA38Q9BRA0 125 aaKnown RBP12.21□□□□□ -0.45
DDX55-201ENST00000238146 ZZEF1O43149 2961 aa12.21□□□□□ -0.46
DDX55-201ENST00000238146 SPAARA0A1B0GVQ0 90 aa12.21□□□□□ -0.46
DDX55-201ENST00000238146 A1L4Q6 167 aa12.21□□□□□ -0.46
DDX55-201ENST00000238146 BUB1B-PAK6H3BSN5 160 aa12.21□□□□□ -0.46
DDX55-201ENST00000238146 KIR3DS1Q14943 382 aa12.21□□□□□ -0.46
DDX55-201ENST00000238146 IGFL3Q6UXB1 125 aa12.21□□□□□ -0.46
DDX55-201ENST00000238146 ADAMTSL5Q6ZMM2 481 aa12.21□□□□□ -0.46
DDX55-201ENST00000238146 DMXL2Q8TDJ6 3036 aa12.21□□□□□ -0.46
DDX55-201ENST00000238146 THBDP07204 575 aa12.2□□□□□ -0.46
DDX55-201ENST00000238146 FTH1P19P0C7X4 201 aa12.2□□□□□ -0.46
DDX55-201ENST00000238146 HSD52Q0P140 79 aa12.2□□□□□ -0.46
DDX55-201ENST00000238146 MRPL51Q4U2R6 128 aaKnown RBP12.2□□□□□ -0.46
DDX55-201ENST00000238146 Q6ZS92 163 aa12.2□□□□□ -0.46
DDX55-201ENST00000238146 OR9G4Q8NGQ1 327 aa12.2□□□□□ -0.46
DDX55-201ENST00000238146 RNASE6Q93091 150 aaKnown RBP12.2□□□□□ -0.46
DDX55-201ENST00000238146 RNF125Q96EQ8 232 aa12.2□□□□□ -0.46
DDX55-201ENST00000238146 TMEM189A5PLL7 270 aa12.2□□□□□ -0.46
DDX55-201ENST00000238146 HBDP02042 147 aa12.2□□□□□ -0.46
DDX55-201ENST00000238146 IL4P05112 153 aa12.2□□□□□ -0.46
DDX55-201ENST00000238146 FCGR2BP31994 310 aaPredicted RBP12.2□□□□□ -0.46
DDX55-201ENST00000238146 DEFB124Q8NES8 71 aa12.2□□□□□ -0.46
DDX55-201ENST00000238146 BDP1A6H8Y1 2624 aa12.2□□□□□ -0.46
DDX55-201ENST00000238146 K7EP34 96 aa12.19□□□□□ -0.46
DDX55-201ENST00000238146 BCL6BQ8N143 479 aaPredicted RBP12.19□□□□□ -0.46
DDX55-201ENST00000238146 FAM57AQ8TBR7 257 aa12.19□□□□□ -0.46
DDX55-201ENST00000238146 A0A0G2JLM5 398 aa12.19□□□□□ -0.46
DDX55-201ENST00000238146 SIVA1O15304 175 aa12.19□□□□□ -0.46
DDX55-201ENST00000238146 SH2D1AO60880 128 aa12.19□□□□□ -0.46
DDX55-201ENST00000238146 S100A7P31151 101 aa12.19□□□□□ -0.46
DDX55-201ENST00000238146 PLGLAQ15195 96 aa12.19□□□□□ -0.46
DDX55-201ENST00000238146 PCP2Q8IVA1 136 aa12.19□□□□□ -0.46
DDX55-201ENST00000238146 IFI27L1Q96BM0 104 aa12.19□□□□□ -0.46
DDX55-201ENST00000238146 ADGRG4Q8IZF6 3080 aa12.19□□□□□ -0.46
DDX55-201ENST00000238146 PIP4P1Q86T03 277 aa12.18□□□□□ -0.46
DDX55-201ENST00000238146 A0A0G2JNJ9 132 aa12.18□□□□□ -0.46
DDX55-201ENST00000238146 OR2K2Q8NGT1 345 aa12.18□□□□□ -0.46
DDX55-201ENST00000238146 Q9UFV3 132 aa12.18□□□□□ -0.46
DDX55-201ENST00000238146 MGAQ8IWI9 3026 aa12.18□□□□□ -0.46
DDX55-201ENST00000238146 SMKR1H3BMG3 65 aa12.17□□□□□ -0.46
DDX55-201ENST00000238146 CNIH1O95406 144 aa12.17□□□□□ -0.46
DDX55-201ENST00000238146 NPYP01303 97 aa12.17□□□□□ -0.46
DDX55-201ENST00000238146 RIPPLY3P57055 190 aa12.17□□□□□ -0.46
DDX55-201ENST00000238146 PRSS57Q6UWY2 283 aa12.17□□□□□ -0.46
DDX55-201ENST00000238146 OR4X2Q8NGF9 303 aa12.17□□□□□ -0.46
DDX55-201ENST00000238146 RAB37Q96AX2 223 aa12.17□□□□□ -0.46
DDX55-201ENST00000238146 ABHD17AQ96GS6 310 aa12.17□□□□□ -0.46
DDX55-201ENST00000238146 WI2-2373I1.2A0A1W2PRP0 233 aa12.17□□□□□ -0.46
DDX55-201ENST00000238146 COX7A1P24310 79 aa12.17□□□□□ -0.46
DDX55-201ENST00000238146 RPEQ96AT9 228 aa12.17□□□□□ -0.46
DDX55-201ENST00000238146 S4R3C0 116 aa12.17□□□□□ -0.46
DDX55-201ENST00000238146 CUL9Q8IWT3 2517 aa12.17□□□□□ -0.46
DDX55-201ENST00000238146 PCNX1Q96RV3 2341 aa12.16□□□□□ -0.46
DDX55-201ENST00000238146 NDUFS7O75251 213 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms