RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 PDE6HQ13956 83 aa12.38□□□□□ -0.43
ITGA4-201ENST00000233573 MXRA5Q9NR99 2828 aa12.38□□□□□ -0.43
ITGA4-201ENST00000233573 TOMM20LQ6UXN7 152 aa12.38□□□□□ -0.43
ITGA4-201ENST00000233573 Q86TA4 180 aa12.38□□□□□ -0.43
ITGA4-201ENST00000233573 TMEM183AQ8IXX5 376 aa12.38□□□□□ -0.43
ITGA4-201ENST00000233573 TLN2Q9Y4G6 2542 aa12.37□□□□□ -0.43
ITGA4-201ENST00000233573 TRBV7-1A0A0A6YYK4 115 aa12.37□□□□□ -0.43
ITGA4-201ENST00000233573 J3QLI3 93 aa12.37□□□□□ -0.43
ITGA4-201ENST00000233573 CA1P00915 261 aaPredicted RBP12.37□□□□□ -0.43
ITGA4-201ENST00000233573 IGHG2P01859 326 aa12.37□□□□□ -0.43
ITGA4-201ENST00000233573 CBLN1P23435 193 aa12.37□□□□□ -0.43
ITGA4-201ENST00000233573 LINC00322Q6ZN03 302 aaPredicted RBP12.37□□□□□ -0.43
ITGA4-201ENST00000233573 CMTM2Q8TAZ6 248 aa12.37□□□□□ -0.43
ITGA4-201ENST00000233573 MS4A10Q96PG2 267 aa12.37□□□□□ -0.43
ITGA4-201ENST00000233573 GAR1Q9NY12 217 aaKnown RBP12.37□□□□□ -0.43
ITGA4-201ENST00000233573 RABAC1Q9UI14 185 aa12.37□□□□□ -0.43
ITGA4-201ENST00000233573 TRAV8-1A0A0A6YYK1 113 aa12.36□□□□□ -0.43
ITGA4-201ENST00000233573 XKRY2A2RUG3 117 aa12.36□□□□□ -0.43
ITGA4-201ENST00000233573 SMAD7O15105 426 aaKnown RBP12.36□□□□□ -0.43
ITGA4-201ENST00000233573 CLEC19AQ6UXS0 136 aa12.36□□□□□ -0.43
ITGA4-201ENST00000233573 GOLT1AQ6ZVE7 132 aa12.36□□□□□ -0.43
ITGA4-201ENST00000233573 EEF1AKMT3Q96AZ1 226 aa12.36□□□□□ -0.43
ITGA4-201ENST00000233573 GRAMD2BQ96HH9 432 aa12.36□□□□□ -0.43
ITGA4-201ENST00000233573 ATP6V0BQ99437 205 aa12.36□□□□□ -0.43
ITGA4-201ENST00000233573 PRSS22Q9GZN4 317 aa12.36□□□□□ -0.43
ITGA4-201ENST00000233573 SERTAD4Q9NUC0 356 aa12.36□□□□□ -0.43
ITGA4-201ENST00000233573 LINC00527Q9UJ94 153 aa12.36□□□□□ -0.43
ITGA4-201ENST00000233573 IGHV3-35A0A0C4DH35 117 aa12.36□□□□□ -0.43
ITGA4-201ENST00000233573 CLPSL1A2RUU4 121 aa12.36□□□□□ -0.43
ITGA4-201ENST00000233573 C19orf71A6NCJ1 209 aa12.36□□□□□ -0.43
ITGA4-201ENST00000233573 BMPR1BO00238 502 aa12.36□□□□□ -0.43
ITGA4-201ENST00000233573 GATCO43716 136 aaKnown RBP12.36□□□□□ -0.43
ITGA4-201ENST00000233573 BRI3O95415 125 aa12.36□□□□□ -0.43
ITGA4-201ENST00000233573 RPL7P18124 248 aaKnown RBP12.36□□□□□ -0.43
ITGA4-201ENST00000233573 TCL1AP56279 114 aa12.36□□□□□ -0.43
ITGA4-201ENST00000233573 ZNF492Q9P255 531 aa12.36□□□□□ -0.43
ITGA4-201ENST00000233573 SMAD5-AS1Q9Y6J3 95 aa12.36□□□□□ -0.43
ITGA4-201ENST00000233573 M0QZK8 103 aa12.35□□□□□ -0.43
ITGA4-201ENST00000233573 PPIFP30405 207 aaKnown RBP12.35□□□□□ -0.43
ITGA4-201ENST00000233573 DEFB112Q30KQ8 113 aa12.35□□□□□ -0.43
ITGA4-201ENST00000233573 PDZD11Q5EBL8 140 aa12.35□□□□□ -0.43
ITGA4-201ENST00000233573 PRR27Q6MZM9 219 aa12.35□□□□□ -0.43
ITGA4-201ENST00000233573 Q71RC1 249 aaPredicted RBP12.35□□□□□ -0.43
ITGA4-201ENST00000233573 TMEM75Q8N9X5 138 aa12.35□□□□□ -0.43
ITGA4-201ENST00000233573 GNB1LQ9BYB4 327 aa12.35□□□□□ -0.43
ITGA4-201ENST00000233573 IZUMO1RA6ND01 250 aa12.34□□□□□ -0.43
ITGA4-201ENST00000233573 FAM223BA6NKX1 122 aa12.34□□□□□ -0.43
ITGA4-201ENST00000233573 IER3P46695 156 aa12.34□□□□□ -0.43
ITGA4-201ENST00000233573 ATP5G2Q06055 141 aa12.34□□□□□ -0.43
ITGA4-201ENST00000233573 FAM223AQ8IWN6 122 aa12.34□□□□□ -0.43
ITGA4-201ENST00000233573 IGHV3OR16-8A0A075B7F1 116 aa12.34□□□□□ -0.43
ITGA4-201ENST00000233573 ZNF785A8K8V0 405 aa12.34□□□□□ -0.43
ITGA4-201ENST00000233573 DIRC3C9JPN6 131 aa12.34□□□□□ -0.43
ITGA4-201ENST00000233573 C9orf152Q5JTZ5 239 aa12.34□□□□□ -0.43
ITGA4-201ENST00000233573 HIST1H2BLQ99880 126 aa12.34□□□□□ -0.43
ITGA4-201ENST00000233573 MRPL18Q9H0U6 180 aaKnown RBP12.34□□□□□ -0.43
ITGA4-201ENST00000233573 M0R3E3 92 aa12.33□□□□□ -0.44
ITGA4-201ENST00000233573 BLCAPP62952 87 aa12.33□□□□□ -0.44
ITGA4-201ENST00000233573 SLC35B1P78383 322 aa12.33□□□□□ -0.44
ITGA4-201ENST00000233573 CYB5R2Q6BCY4 276 aa12.33□□□□□ -0.44
ITGA4-201ENST00000233573 TMEM136Q6ZRR5 245 aa12.33□□□□□ -0.44
ITGA4-201ENST00000233573 Q6ZS46 218 aa12.33□□□□□ -0.44
ITGA4-201ENST00000233573 LINC00469Q8N7U9 141 aa12.33□□□□□ -0.44
ITGA4-201ENST00000233573 TSKUQ8WUA8 353 aa12.33□□□□□ -0.44
ITGA4-201ENST00000233573 GSN-AS1Q9NRJ2 163 aa12.33□□□□□ -0.44
ITGA4-201ENST00000233573 LINC00587B1AMM8 73 aa12.33□□□□□ -0.44
ITGA4-201ENST00000233573 BUB3O43684 328 aa12.33□□□□□ -0.44
ITGA4-201ENST00000233573 ZNF253O75346 499 aa12.33□□□□□ -0.44
ITGA4-201ENST00000233573 FSHBP01225 129 aa12.33□□□□□ -0.44
ITGA4-201ENST00000233573 IGHV4-59P01825 116 aa12.33□□□□□ -0.44
ITGA4-201ENST00000233573 S100A2P29034 98 aa12.33□□□□□ -0.44
ITGA4-201ENST00000233573 PSG9Q00887 426 aa12.33□□□□□ -0.44
ITGA4-201ENST00000233573 PSG3Q16557 428 aa12.33□□□□□ -0.44
ITGA4-201ENST00000233573 SNURFLB1AK76 121 aa12.32□□□□□ -0.44
ITGA4-201ENST00000233573 NPIPB6E9PJ23 425 aa12.32□□□□□ -0.44
ITGA4-201ENST00000233573 SPINK4O60575 86 aa12.32□□□□□ -0.44
ITGA4-201ENST00000233573 S100A7P31151 101 aa12.32□□□□□ -0.44
ITGA4-201ENST00000233573 COX19Q49B96 90 aa12.32□□□□□ -0.44
ITGA4-201ENST00000233573 CT83Q5H943 113 aa12.32□□□□□ -0.44
ITGA4-201ENST00000233573 PRNTQ86SH4 94 aa12.32□□□□□ -0.44
ITGA4-201ENST00000233573 ARL6IP6Q8N6S5 226 aa12.32□□□□□ -0.44
ITGA4-201ENST00000233573 NUP35Q8NFH5 326 aa12.32□□□□□ -0.44
ITGA4-201ENST00000233573 OR10D4PQ8NGN7 298 aa12.32□□□□□ -0.44
ITGA4-201ENST00000233573 RPP21Q9H633 154 aaKnown RBP12.32□□□□□ -0.44
ITGA4-201ENST00000233573 H3BUA1 57 aa12.31□□□□□ -0.44
ITGA4-201ENST00000233573 IGHG4P01861 327 aa12.31□□□□□ -0.44
ITGA4-201ENST00000233573 TRGV3P03979 118 aa12.31□□□□□ -0.44
ITGA4-201ENST00000233573 FABP4P15090 132 aa12.31□□□□□ -0.44
ITGA4-201ENST00000233573 RPL19P84098 196 aaKnown RBP12.31□□□□□ -0.44
ITGA4-201ENST00000233573 WDR73Q6P4I2 378 aa12.31□□□□□ -0.44
ITGA4-201ENST00000233573 C16orf54Q6UWD8 224 aa12.31□□□□□ -0.44
ITGA4-201ENST00000233573 WIPF2Q8TF74 440 aaPredicted RBP12.31□□□□□ -0.44
ITGA4-201ENST00000233573 NOL4LQ96MY1 436 aaPredicted RBP12.31□□□□□ -0.44
ITGA4-201ENST00000233573 NEU1Q99519 415 aa12.31□□□□□ -0.44
ITGA4-201ENST00000233573 AAMDCQ9H7C9 122 aa12.31□□□□□ -0.44
ITGA4-201ENST00000233573 GNB4Q9HAV0 340 aa12.31□□□□□ -0.44
ITGA4-201ENST00000233573 AMBPP02760 352 aa12.31□□□□□ -0.44
ITGA4-201ENST00000233573 MT-ND6P03923 174 aa12.31□□□□□ -0.44
ITGA4-201ENST00000233573 RAB9AP51151 201 aa12.31□□□□□ -0.44
ITGA4-201ENST00000233573 PYY3Q5JQD4 70 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms