RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 S100A12P80511 92 aa13.91□□□□□ -0.18
CBX1-201ENST00000225603 PDZD11Q5EBL8 140 aa13.91□□□□□ -0.18
CBX1-201ENST00000225603 CENPWQ5EE01 88 aa13.91□□□□□ -0.18
CBX1-201ENST00000225603 KLHDC1Q8N7A1 406 aa13.91□□□□□ -0.18
CBX1-201ENST00000225603 TCF21O43680 179 aa13.91□□□□□ -0.18
CBX1-201ENST00000225603 ELANEP08246 267 aa13.91□□□□□ -0.18
CBX1-201ENST00000225603 GNG4P50150 75 aa13.91□□□□□ -0.18
CBX1-201ENST00000225603 SUMO1P63165 101 aaKnown RBP13.91□□□□□ -0.18
CBX1-201ENST00000225603 HIST2H2BDQ6DRA6 164 aa13.91□□□□□ -0.18
CBX1-201ENST00000225603 ZNF491Q8N8L2 437 aa13.91□□□□□ -0.18
CBX1-201ENST00000225603 OR4X2Q8NGF9 303 aa13.91□□□□□ -0.18
CBX1-201ENST00000225603 LINC01006Q8NI28 216 aa13.91□□□□□ -0.18
CBX1-201ENST00000225603 GNB4Q9HAV0 340 aa13.91□□□□□ -0.18
CBX1-201ENST00000225603 IGHV3OR16-8A0A075B7F1 116 aa13.9□□□□□ -0.18
CBX1-201ENST00000225603 A0A0G2JLM5 398 aa13.9□□□□□ -0.18
CBX1-201ENST00000225603 ZNF320A2RRD8 509 aa13.9□□□□□ -0.18
CBX1-201ENST00000225603 PLP1P60201 277 aa13.9□□□□□ -0.18
CBX1-201ENST00000225603 TCTEX1D4Q5JR98 221 aa13.9□□□□□ -0.18
CBX1-201ENST00000225603 MYOZ3Q8TDC0 251 aa13.9□□□□□ -0.18
CBX1-201ENST00000225603 PAXXQ9BUH6 204 aa13.9□□□□□ -0.18
CBX1-201ENST00000225603 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.9□□□□□ -0.18
CBX1-201ENST00000225603 PYYP10082 97 aa13.9□□□□□ -0.18
CBX1-201ENST00000225603 RNF152Q8N8N0 203 aa13.9□□□□□ -0.18
CBX1-201ENST00000225603 C16orf95Q9H693 158 aa13.9□□□□□ -0.18
CBX1-201ENST00000225603 TEP1Q99973 2627 aaKnown RBP13.89□□□□□ -0.19
CBX1-201ENST00000225603 WI2-2373I1.2A0A1W2PRP0 233 aa13.89□□□□□ -0.19
CBX1-201ENST00000225603 HYPMO75409 117 aa13.89□□□□□ -0.19
CBX1-201ENST00000225603 IL4P05112 153 aa13.89□□□□□ -0.19
CBX1-201ENST00000225603 FABP1P07148 127 aa13.89□□□□□ -0.19
CBX1-201ENST00000225603 USF2Q15853 346 aaPredicted RBP13.89□□□□□ -0.19
CBX1-201ENST00000225603 SETD2Q9BYW2 2564 aaPredicted RBP13.89□□□□□ -0.19
CBX1-201ENST00000225603 LINC00305Q7Z4B0 112 aa13.88□□□□□ -0.19
CBX1-201ENST00000225603 OR10D4PQ8NGN7 298 aa13.88□□□□□ -0.19
CBX1-201ENST00000225603 WIPF2Q8TF74 440 aaPredicted RBP13.88□□□□□ -0.19
CBX1-201ENST00000225603 RNF125Q96EQ8 232 aa13.88□□□□□ -0.19
CBX1-201ENST00000225603 OR51M1Q9H341 326 aa13.88□□□□□ -0.19
CBX1-201ENST00000225603 IL36BQ9NZH7 164 aa13.88□□□□□ -0.19
CBX1-201ENST00000225603 ARL3P36405 182 aa13.88□□□□□ -0.19
CBX1-201ENST00000225603 TMEM183AQ8IXX5 376 aa13.88□□□□□ -0.19
CBX1-201ENST00000225603 ATP6V0BQ99437 205 aa13.88□□□□□ -0.19
CBX1-201ENST00000225603 MRPL27Q9P0M9 148 aaKnown RBP13.88□□□□□ -0.19
CBX1-201ENST00000225603 SLC17A3O00476 420 aa13.87□□□□□ -0.19
CBX1-201ENST00000225603 OR5I1Q13606 314 aa13.87□□□□□ -0.19
CBX1-201ENST00000225603 COA6Q5JTJ3 125 aaKnown RBP13.87□□□□□ -0.19
CBX1-201ENST00000225603 TOMM20LQ6UXN7 152 aa13.87□□□□□ -0.19
CBX1-201ENST00000225603 ZNF600Q6ZNG1 722 aa13.87□□□□□ -0.19
CBX1-201ENST00000225603 FXYD5Q96DB9 178 aa13.87□□□□□ -0.19
CBX1-201ENST00000225603 XKRY2A2RUG3 117 aa13.87□□□□□ -0.19
CBX1-201ENST00000225603 FABP4P15090 132 aa13.87□□□□□ -0.19
CBX1-201ENST00000225603 ERVFC1-1P60608 527 aa13.87□□□□□ -0.19
CBX1-201ENST00000225603 PYY3Q5JQD4 70 aa13.87□□□□□ -0.19
CBX1-201ENST00000225603 LEMD1Q68G75 181 aa13.87□□□□□ -0.19
CBX1-201ENST00000225603 C18orf65Q6ZTR6 163 aa13.87□□□□□ -0.19
CBX1-201ENST00000225603 IGF2BP2-AS1Q96M15 143 aa13.87□□□□□ -0.19
CBX1-201ENST00000225603 MAST4O15021 2626 aa13.87□□□□□ -0.19
CBX1-201ENST00000225603 TRAV9-1A0A075B6T8 112 aa13.86□□□□□ -0.19
CBX1-201ENST00000225603 BMPR1BO00238 502 aa13.86□□□□□ -0.19
CBX1-201ENST00000225603 NDUFA7O95182 113 aa13.86□□□□□ -0.19
CBX1-201ENST00000225603 ZFAND3Q9H8U3 227 aa13.86□□□□□ -0.19
CBX1-201ENST00000225603 HIGD1AQ9Y241 93 aa13.86□□□□□ -0.19
CBX1-201ENST00000225603 SCGB2A1O75556 95 aa13.86□□□□□ -0.19
CBX1-201ENST00000225603 STXBP6Q8NFX7 210 aa13.86□□□□□ -0.19
CBX1-201ENST00000225603 HIST1H2BLQ99880 126 aa13.86□□□□□ -0.19
CBX1-201ENST00000225603 TRAPPC1Q9Y5R8 145 aa13.86□□□□□ -0.19
CBX1-201ENST00000225603 V9GYV3 84 aa13.86□□□□□ -0.19
CBX1-201ENST00000225603 C2CD3Q4AC94 2353 aa13.86□□□□□ -0.19
CBX1-201ENST00000225603 NIPBLQ6KC79 2804 aaeCLIP13.85□□□□□ -0.19
CBX1-201ENST00000225603 IGLV2-8P01709 118 aa13.85□□□□□ -0.19
CBX1-201ENST00000225603 SLC25A39Q9BZJ4 359 aaPredicted RBP13.85□□□□□ -0.19
CBX1-201ENST00000225603 GSN-AS1Q9NRJ2 163 aa13.85□□□□□ -0.19
CBX1-201ENST00000225603 PEF1Q9UBV8 284 aaKnown RBP13.85□□□□□ -0.19
CBX1-201ENST00000225603 HAX1O00165 279 aa13.84□□□□□ -0.19
CBX1-201ENST00000225603 GCGP01275 180 aa13.84□□□□□ -0.19
CBX1-201ENST00000225603 C11orf44Q8N8P7 122 aa13.84□□□□□ -0.19
CBX1-201ENST00000225603 UBE2E2Q96LR5 201 aa13.84□□□□□ -0.19
CBX1-201ENST00000225603 TAS2R60P59551 318 aa13.84□□□□□ -0.19
CBX1-201ENST00000225603 RPEL1Q2QD12 228 aa13.84□□□□□ -0.19
CBX1-201ENST00000225603 JMJD1CQ15652 2540 aa13.83□□□□□ -0.19
CBX1-201ENST00000225603 CLPSL1A2RUU4 121 aa13.83□□□□□ -0.2
CBX1-201ENST00000225603 UNQ9165/PRO28630Q6UXU0 137 aa13.83□□□□□ -0.2
CBX1-201ENST00000225603 PACRGQ96M98 296 aaPredicted RBP13.83□□□□□ -0.2
CBX1-201ENST00000225603 OSTCQ9NRP0 149 aa13.83□□□□□ -0.2
CBX1-201ENST00000225603 PEX7O00628 323 aa13.83□□□□□ -0.2
CBX1-201ENST00000225603 MYCNOSP40205 109 aa13.83□□□□□ -0.2
CBX1-201ENST00000225603 RELQ04864 619 aaPredicted RBP13.83□□□□□ -0.2
CBX1-201ENST00000225603 SHANK2-AS3Q9BTD1 123 aa13.83□□□□□ -0.2
CBX1-201ENST00000225603 RNASE7Q9H1E1 156 aaKnown RBP13.83□□□□□ -0.2
CBX1-201ENST00000225603 ISLRO14498 428 aa13.82□□□□□ -0.2
CBX1-201ENST00000225603 ZNF207O43670 478 aaKnown RBP13.82□□□□□ -0.2
CBX1-201ENST00000225603 SNRPCP09234 159 aaKnown RBP13.82□□□□□ -0.2
CBX1-201ENST00000225603 LGALS1P09382 135 aaKnown RBP13.82□□□□□ -0.2
CBX1-201ENST00000225603 CD28P10747 220 aa13.82□□□□□ -0.2
CBX1-201ENST00000225603 CNN1P51911 297 aaKnown RBP13.82□□□□□ -0.2
CBX1-201ENST00000225603 LINC00479Q96M42 142 aa13.82□□□□□ -0.2
CBX1-201ENST00000225603 RNF114Q9Y508 228 aa13.82□□□□□ -0.2
CBX1-201ENST00000225603 H3BRN7 92 aa13.82□□□□□ -0.2
CBX1-201ENST00000225603 MGST1P10620 155 aaKnown RBP13.81□□□□□ -0.2
CBX1-201ENST00000225603 KHDC1LQ5JSQ8 128 aa13.81□□□□□ -0.2
CBX1-201ENST00000225603 AMBPP02760 352 aa13.8□□□□□ -0.2
CBX1-201ENST00000225603 GP9P14770 177 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms