RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 KIR2DL5BQ8NHK3 375 aa10.56□□□□□ -0.72
SUPT4H1-201ENST00000225504 SAT2Q96F10 170 aaPredicted RBP10.56□□□□□ -0.72
SUPT4H1-201ENST00000225504 SPATA25Q9BR10 227 aa10.56□□□□□ -0.72
SUPT4H1-201ENST00000225504 CSTL1Q9H114 145 aa10.56□□□□□ -0.72
SUPT4H1-201ENST00000225504 HRH4Q9H3N8 390 aa10.56□□□□□ -0.72
SUPT4H1-201ENST00000225504 ZMAT4Q9H898 229 aa10.56□□□□□ -0.72
SUPT4H1-201ENST00000225504 RNF24Q9Y225 148 aa10.56□□□□□ -0.72
SUPT4H1-201ENST00000225504 FUT9Q9Y231 359 aa10.56□□□□□ -0.72
SUPT4H1-201ENST00000225504 IGKV3-20P01619 116 aa10.55□□□□□ -0.72
SUPT4H1-201ENST00000225504 ZNF705DP0CH99 300 aaPredicted RBP10.55□□□□□ -0.72
SUPT4H1-201ENST00000225504 ZNF705BP0CI00 300 aaPredicted RBP10.55□□□□□ -0.72
SUPT4H1-201ENST00000225504 APOC4P55056 127 aa10.55□□□□□ -0.72
SUPT4H1-201ENST00000225504 RAB2AP61019 212 aa10.55□□□□□ -0.72
SUPT4H1-201ENST00000225504 LRRC20Q8TCA0 184 aa10.55□□□□□ -0.72
SUPT4H1-201ENST00000225504 OVOL2Q9BRP0 275 aa10.55□□□□□ -0.72
SUPT4H1-201ENST00000225504 SAV1Q9H4B6 383 aaPredicted RBP10.55□□□□□ -0.72
SUPT4H1-201ENST00000225504 ZNF331Q9NQX6 463 aaPredicted RBP10.55□□□□□ -0.72
SUPT4H1-201ENST00000225504 TMEM14CQ9P0S9 112 aa10.55□□□□□ -0.72
SUPT4H1-201ENST00000225504 TIMM9Q9Y5J7 89 aa10.55□□□□□ -0.72
SUPT4H1-201ENST00000225504 HMSDA8MTL9 139 aa10.55□□□□□ -0.72
SUPT4H1-201ENST00000225504 CD300CQ08708 224 aa10.55□□□□□ -0.72
SUPT4H1-201ENST00000225504 DEFB135Q30KP9 77 aa10.55□□□□□ -0.72
SUPT4H1-201ENST00000225504 KCNRGQ8N5I3 272 aa10.55□□□□□ -0.72
SUPT4H1-201ENST00000225504 ZNF503Q96F45 646 aa10.55□□□□□ -0.72
SUPT4H1-201ENST00000225504 RPRMQ9NS64 109 aa10.55□□□□□ -0.72
SUPT4H1-201ENST00000225504 A0A0J9YX75 114 aa10.54□□□□□ -0.72
SUPT4H1-201ENST00000225504 ZNF705FA8MVS1 300 aaPredicted RBP10.54□□□□□ -0.72
SUPT4H1-201ENST00000225504 UBE2CO00762 179 aa10.54□□□□□ -0.72
SUPT4H1-201ENST00000225504 NDUFB4O95168 129 aa10.54□□□□□ -0.72
SUPT4H1-201ENST00000225504 HIST1H1EP10412 219 aaKnown RBP10.54□□□□□ -0.72
SUPT4H1-201ENST00000225504 HLA-DRB4P13762 266 aa10.54□□□□□ -0.72
SUPT4H1-201ENST00000225504 M6PRP20645 277 aa10.54□□□□□ -0.72
SUPT4H1-201ENST00000225504 PSG3Q16557 428 aa10.54□□□□□ -0.72
SUPT4H1-201ENST00000225504 SAMD13Q5VXD3 122 aa10.54□□□□□ -0.72
SUPT4H1-201ENST00000225504 FOXI2Q6ZQN5 318 aa10.54□□□□□ -0.72
SUPT4H1-201ENST00000225504 Q6ZWC4 215 aa10.54□□□□□ -0.72
SUPT4H1-201ENST00000225504 MRPL32Q9BYC8 188 aaKnown RBP10.54□□□□□ -0.72
SUPT4H1-201ENST00000225504 HLA-DRB4X5D2U9 266 aa10.54□□□□□ -0.72
SUPT4H1-201ENST00000225504 TRBV19A0A075B6N1 114 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 BORCS7-ASMTA0A0B4J1R7 106 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 CA1P00915 261 aaPredicted RBP10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 OR10J4P0C629 311 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 C4BPBP20851 252 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 FXYD7P58549 80 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 RHOBP62745 196 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 ACOT6Q3I5F7 207 aaPredicted RBP10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 FAM122CQ6P4D5 195 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 LCN15Q6UWW0 184 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 TCTE3Q8IZS6 198 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 RPP25LQ8N5L8 163 aaKnown RBP10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 ZNF738Q8NE65 137 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 OR4B1Q8NGF8 309 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 OR10G4Q8NGN3 311 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 OR10G9Q8NGN4 311 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 OR10G7Q8NGN6 311 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 OR2G3Q8NGZ4 309 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 BLNKQ8WV28 456 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 RNF183Q96D59 192 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 FXYD5Q96DB9 178 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 PSMG3Q9BT73 122 aaPredicted RBP10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 OR51M1Q9H341 326 aa10.53□□□□□ -0.72
SUPT4H1-201ENST00000225504 STAB2Q8WWQ8 2551 aa10.52□□□□□ -0.72
SUPT4H1-201ENST00000225504 PRAC2D3DTV9 90 aa10.52□□□□□ -0.73
SUPT4H1-201ENST00000225504 TAAR5O14804 337 aa10.52□□□□□ -0.73
SUPT4H1-201ENST00000225504 HMGB3O15347 200 aaKnown RBP10.52□□□□□ -0.73
SUPT4H1-201ENST00000225504 SPRY2O43597 315 aa10.52□□□□□ -0.73
SUPT4H1-201ENST00000225504 GUK1Q16774 197 aa10.52□□□□□ -0.73
SUPT4H1-201ENST00000225504 EBLN2Q6P2I7 272 aa10.52□□□□□ -0.73
SUPT4H1-201ENST00000225504 RNF141Q8WVD5 230 aa10.52□□□□□ -0.73
SUPT4H1-201ENST00000225504 PAXXQ9BUH6 204 aa10.52□□□□□ -0.73
SUPT4H1-201ENST00000225504 CLEC5AQ9NY25 188 aa10.52□□□□□ -0.73
SUPT4H1-201ENST00000225504 NBEAP1P0C6P0 100 aa10.51□□□□□ -0.73
SUPT4H1-201ENST00000225504 ZNF345Q14585 488 aa10.51□□□□□ -0.73
SUPT4H1-201ENST00000225504 MORN3Q6PF18 240 aaPredicted RBP10.51□□□□□ -0.73
SUPT4H1-201ENST00000225504 TMUB2Q71RG4 321 aa10.51□□□□□ -0.73
SUPT4H1-201ENST00000225504 RPUSD4Q96CM3 377 aaKnown RBP10.51□□□□□ -0.73
SUPT4H1-201ENST00000225504 GNPNAT1Q96EK6 184 aaPredicted RBP10.51□□□□□ -0.73
SUPT4H1-201ENST00000225504 ARPC5LQ9BPX5 153 aa10.51□□□□□ -0.73
SUPT4H1-201ENST00000225504 SLC50A1Q9BRV3 221 aa10.51□□□□□ -0.73
SUPT4H1-201ENST00000225504 A0A0D9SG52 128 aa10.5□□□□□ -0.73
SUPT4H1-201ENST00000225504 A0A1W2PPV4 95 aa10.5□□□□□ -0.73
SUPT4H1-201ENST00000225504 OR7C2O60412 319 aa10.5□□□□□ -0.73
SUPT4H1-201ENST00000225504 JTBO76095 146 aa10.5□□□□□ -0.73
SUPT4H1-201ENST00000225504 SPP1P10451 314 aa10.5□□□□□ -0.73
SUPT4H1-201ENST00000225504 CNN1P51911 297 aaKnown RBP10.5□□□□□ -0.73
SUPT4H1-201ENST00000225504 SERF2P84101 59 aa10.5□□□□□ -0.73
SUPT4H1-201ENST00000225504 LGALSLQ3ZCW2 172 aaPredicted RBP10.5□□□□□ -0.73
SUPT4H1-201ENST00000225504 AKAP14Q86UN6 197 aa10.5□□□□□ -0.73
SUPT4H1-201ENST00000225504 EXOC3-AS1Q8N2X6 119 aa10.5□□□□□ -0.73
SUPT4H1-201ENST00000225504 SLC35B3Q9H1N7 401 aa10.5□□□□□ -0.73
SUPT4H1-201ENST00000225504 PLA2G2EQ9NZK7 142 aa10.5□□□□□ -0.73
SUPT4H1-201ENST00000225504 XCL2Q9UBD3 114 aa10.5□□□□□ -0.73
SUPT4H1-201ENST00000225504 M0R3E3 92 aa10.49□□□□□ -0.73
SUPT4H1-201ENST00000225504 AMTNQ6UX39 209 aa10.49□□□□□ -0.73
SUPT4H1-201ENST00000225504 SSX7Q7RTT5 188 aa10.49□□□□□ -0.73
SUPT4H1-201ENST00000225504 CSNK1G2-AS1Q8NCQ2 148 aa10.49□□□□□ -0.73
SUPT4H1-201ENST00000225504 OR8A1Q8NGG7 326 aa10.49□□□□□ -0.73
SUPT4H1-201ENST00000225504 RAB24Q969Q5 203 aa10.49□□□□□ -0.73
SUPT4H1-201ENST00000225504 CLUHP3Q96NS8 147 aa10.49□□□□□ -0.73
SUPT4H1-201ENST00000225504 TP53TG1Q9Y2A0 90 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms