RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 Q6AWC8 147 aa19.62■□□□□ 0.73
RUNDC3A-201ENST00000225441 CFHR4Q92496 578 aa19.62■□□□□ 0.73
RUNDC3A-201ENST00000225441 SSBP4Q9BWG4 385 aaPredicted RBP19.62■□□□□ 0.73
RUNDC3A-201ENST00000225441 GSX1Q9H4S2 264 aaPredicted RBP19.62■□□□□ 0.73
RUNDC3A-201ENST00000225441 HELZ2Q9BYK8 2649 aaKnown RBP19.62■□□□□ 0.73
RUNDC3A-201ENST00000225441 SERTM2A0A1B0GWG4 89 aa19.61■□□□□ 0.73
RUNDC3A-201ENST00000225441 WI2-2373I1.2A0A1W2PRP0 233 aa19.61■□□□□ 0.73
RUNDC3A-201ENST00000225441 PGLYRP4Q96LB8 373 aa19.61■□□□□ 0.73
RUNDC3A-201ENST00000225441 SGK494Q96LW2 274 aa19.61■□□□□ 0.73
RUNDC3A-201ENST00000225441 MALRD1Q5VYJ5 2156 aa19.61■□□□□ 0.73
RUNDC3A-201ENST00000225441 C2orf70A6NJV1 201 aa19.6■□□□□ 0.73
RUNDC3A-201ENST00000225441 NPIPB5A8MRT5 1133 aa19.6■□□□□ 0.73
RUNDC3A-201ENST00000225441 OOSP1A8MZH6 123 aa19.6■□□□□ 0.73
RUNDC3A-201ENST00000225441 NDUFS8O00217 210 aa19.6■□□□□ 0.73
RUNDC3A-201ENST00000225441 CRXO43186 299 aaPredicted RBP19.6■□□□□ 0.73
RUNDC3A-201ENST00000225441 CLEC2AQ6UVW9 174 aa19.6■□□□□ 0.73
RUNDC3A-201ENST00000225441 C1orf122Q6ZSJ8 110 aa19.6■□□□□ 0.73
RUNDC3A-201ENST00000225441 GOLT1AQ6ZVE7 132 aa19.6■□□□□ 0.73
RUNDC3A-201ENST00000225441 C10orf105Q8TEF2 133 aa19.6■□□□□ 0.73
RUNDC3A-201ENST00000225441 PIMREGQ9BSJ6 248 aa19.6■□□□□ 0.73
RUNDC3A-201ENST00000225441 MRPS16Q9Y3D3 137 aaKnown RBP19.6■□□□□ 0.73
RUNDC3A-201ENST00000225441 LOC102724200A0A096LPH7 203 aaPredicted RBP19.6■□□□□ 0.73
RUNDC3A-201ENST00000225441 CHEK1O14757 476 aa19.6■□□□□ 0.73
RUNDC3A-201ENST00000225441 ZNF124Q15973 351 aa19.6■□□□□ 0.73
RUNDC3A-201ENST00000225441 CRYBG3Q68DQ2 2970 aa19.6■□□□□ 0.73
RUNDC3A-201ENST00000225441 ZNF491Q8N8L2 437 aa19.6■□□□□ 0.73
RUNDC3A-201ENST00000225441 ODF3BA8MYP8 253 aa19.59■□□□□ 0.73
RUNDC3A-201ENST00000225441 PRTN3P24158 256 aa19.59■□□□□ 0.73
RUNDC3A-201ENST00000225441 RIGQ13278 110 aa19.59■□□□□ 0.73
RUNDC3A-201ENST00000225441 ASPHD1Q5U4P2 390 aa19.59■□□□□ 0.73
RUNDC3A-201ENST00000225441 RNF125Q96EQ8 232 aa19.59■□□□□ 0.73
RUNDC3A-201ENST00000225441 TMEM70Q9BUB7 260 aa19.59■□□□□ 0.73
RUNDC3A-201ENST00000225441 FBN2P35556 2912 aa19.58■□□□□ 0.73
RUNDC3A-201ENST00000225441 FBLL1A6NHQ2 334 aaKnown RBP19.58■□□□□ 0.73
RUNDC3A-201ENST00000225441 APOHP02749 345 aaPredicted RBP19.58■□□□□ 0.73
RUNDC3A-201ENST00000225441 HNRNPA3P51991 378 aaKnown RBP19.58■□□□□ 0.73
RUNDC3A-201ENST00000225441 CCDC144NLQ6NUI1 221 aa19.58■□□□□ 0.73
RUNDC3A-201ENST00000225441 EBLN2Q6P2I7 272 aa19.58■□□□□ 0.73
RUNDC3A-201ENST00000225441 SIGLEC15Q6ZMC9 328 aa19.58■□□□□ 0.73
RUNDC3A-201ENST00000225441 PRNTQ86SH4 94 aa19.58■□□□□ 0.73
RUNDC3A-201ENST00000225441 TXN2Q99757 166 aa19.58■□□□□ 0.73
RUNDC3A-201ENST00000225441 HLA-DRB1P01911 266 aa19.58■□□□□ 0.72
RUNDC3A-201ENST00000225441 ZNF25P17030 456 aaPredicted RBP19.58■□□□□ 0.72
RUNDC3A-201ENST00000225441 DLX1P56177 255 aa19.58■□□□□ 0.72
RUNDC3A-201ENST00000225441 HIST2H2BCQ6DN03 193 aa19.58■□□□□ 0.72
RUNDC3A-201ENST00000225441 DOPEY2Q9Y3R5 2298 aa19.57■□□□□ 0.72
RUNDC3A-201ENST00000225441 LOC105371242A0A075B767 164 aa19.57■□□□□ 0.72
RUNDC3A-201ENST00000225441 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.57■□□□□ 0.72
RUNDC3A-201ENST00000225441 MRPS12O15235 138 aaKnown RBP19.57■□□□□ 0.72
RUNDC3A-201ENST00000225441 MFAP4P55083 255 aa19.57■□□□□ 0.72
RUNDC3A-201ENST00000225441 LMO4P61968 165 aa19.57■□□□□ 0.72
RUNDC3A-201ENST00000225441 LHFPL4Q7Z7J7 247 aa19.57■□□□□ 0.72
RUNDC3A-201ENST00000225441 EXOC3-AS1Q8N2X6 119 aa19.57■□□□□ 0.72
RUNDC3A-201ENST00000225441 URB1-AS1Q96HZ7 61 aa19.57■□□□□ 0.72
RUNDC3A-201ENST00000225441 TACC2O95359 2948 aa19.57■□□□□ 0.72
RUNDC3A-201ENST00000225441 H3BTX0 84 aa19.56■□□□□ 0.72
RUNDC3A-201ENST00000225441 DLEU1O43261 78 aa19.56■□□□□ 0.72
RUNDC3A-201ENST00000225441 SCGB2A1O75556 95 aa19.56■□□□□ 0.72
RUNDC3A-201ENST00000225441 FOSL1P15407 271 aa19.56■□□□□ 0.72
RUNDC3A-201ENST00000225441 S100A7P31151 101 aa19.56■□□□□ 0.72
RUNDC3A-201ENST00000225441 PSG3Q16557 428 aa19.56■□□□□ 0.72
RUNDC3A-201ENST00000225441 C5orf64Q2M2E5 130 aa19.56■□□□□ 0.72
RUNDC3A-201ENST00000225441 Q6ZN92 141 aa19.56■□□□□ 0.72
RUNDC3A-201ENST00000225441 CIARTQ8N365 385 aaPredicted RBP19.56■□□□□ 0.72
RUNDC3A-201ENST00000225441 KIR3DL3Q8N743 410 aa19.56■□□□□ 0.72
RUNDC3A-201ENST00000225441 LPAR2Q9HBW0 351 aa19.56■□□□□ 0.72
RUNDC3A-201ENST00000225441 PSG8Q9UQ74 426 aa19.56■□□□□ 0.72
RUNDC3A-201ENST00000225441 A0A1B0GUT8 65 aa19.55■□□□□ 0.72
RUNDC3A-201ENST00000225441 LINC00614P0C842 121 aa19.55■□□□□ 0.72
RUNDC3A-201ENST00000225441 ZNF562Q6V9R5 426 aa19.55■□□□□ 0.72
RUNDC3A-201ENST00000225441 PLXNB1O43157 2135 aa19.55■□□□□ 0.72
RUNDC3A-201ENST00000225441 DSCR9P59020 149 aa19.55■□□□□ 0.72
RUNDC3A-201ENST00000225441 TTC9CQ8N5M4 171 aa19.55■□□□□ 0.72
RUNDC3A-201ENST00000225441 ZNF414Q96IQ9 312 aa19.55■□□□□ 0.72
RUNDC3A-201ENST00000225441 IGLV11-55A0A075B6I3 123 aa19.54■□□□□ 0.72
RUNDC3A-201ENST00000225441 LDLRAD2Q5SZI1 272 aa19.54■□□□□ 0.72
RUNDC3A-201ENST00000225441 LAMTOR2Q9Y2Q5 125 aa19.54■□□□□ 0.72
RUNDC3A-201ENST00000225441 SPG11Q96JI7 2443 aa19.53■□□□□ 0.72
RUNDC3A-201ENST00000225441 IGHV4-30-2A0A087WSY4 118 aa19.53■□□□□ 0.72
RUNDC3A-201ENST00000225441 ZFP36P26651 326 aaKnown RBP19.53■□□□□ 0.72
RUNDC3A-201ENST00000225441 PSG9Q00887 426 aa19.53■□□□□ 0.72
RUNDC3A-201ENST00000225441 FAM120AOSQ5T036 256 aa19.53■□□□□ 0.72
RUNDC3A-201ENST00000225441 TMEM208Q9BTX3 173 aa19.53■□□□□ 0.72
RUNDC3A-201ENST00000225441 BEX4Q9NWD9 120 aaPredicted RBP19.53■□□□□ 0.72
RUNDC3A-201ENST00000225441 THYN1Q9P016 225 aa19.53■□□□□ 0.72
RUNDC3A-201ENST00000225441 TRAV8-1A0A0A6YYK1 113 aa19.53■□□□□ 0.72
RUNDC3A-201ENST00000225441 GNG7O60262 68 aa19.53■□□□□ 0.72
RUNDC3A-201ENST00000225441 IL4P05112 153 aa19.53■□□□□ 0.72
RUNDC3A-201ENST00000225441 MINOS1Q5TGZ0 78 aa19.53■□□□□ 0.72
RUNDC3A-201ENST00000225441 COX8CQ7Z4L0 72 aa19.53■□□□□ 0.72
RUNDC3A-201ENST00000225441 AAMDCQ9H7C9 122 aa19.53■□□□□ 0.72
RUNDC3A-201ENST00000225441 MINOS1-NBL1R4GNA1 71 aa19.53■□□□□ 0.72
RUNDC3A-201ENST00000225441 SH2D7A6NKC9 451 aaPredicted RBP19.52■□□□□ 0.72
RUNDC3A-201ENST00000225441 ARF6P62330 175 aa19.52■□□□□ 0.72
RUNDC3A-201ENST00000225441 EBI3Q14213 229 aa19.52■□□□□ 0.72
RUNDC3A-201ENST00000225441 ZC2HC1AQ96GY0 325 aa19.52■□□□□ 0.72
RUNDC3A-201ENST00000225441 CELSR2Q9HCU4 2923 aa19.51■□□□□ 0.71
RUNDC3A-201ENST00000225441 IGHV4-61A0A0C4DH41 118 aa19.51■□□□□ 0.71
RUNDC3A-201ENST00000225441 PRB3Q04118 309 aaPredicted RBP19.51■□□□□ 0.71
RUNDC3A-201ENST00000225441 Q56UQ5 140 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms