RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.18□□□□□ -0.62
RPA3-201ENST00000223129 BPIFA4PQ86YQ2 179 aa11.18□□□□□ -0.62
RPA3-201ENST00000223129 IQCF2Q8IXL9 164 aa11.18□□□□□ -0.62
RPA3-201ENST00000223129 SLC25A2Q9BXI2 301 aa11.18□□□□□ -0.62
RPA3-201ENST00000223129 C19orf73Q9NVV2 129 aa11.18□□□□□ -0.62
RPA3-201ENST00000223129 TMEM218A2RU14 115 aa11.18□□□□□ -0.62
RPA3-201ENST00000223129 FAM74A7A6NL05 159 aa11.18□□□□□ -0.62
RPA3-201ENST00000223129 H3BTX0 84 aa11.18□□□□□ -0.62
RPA3-201ENST00000223129 FLI1Q01543 452 aaPredicted RBP11.18□□□□□ -0.62
RPA3-201ENST00000223129 ODF3L2Q3SX64 289 aa11.18□□□□□ -0.62
RPA3-201ENST00000223129 FAM74A3Q4VXF1 159 aa11.18□□□□□ -0.62
RPA3-201ENST00000223129 RPP25LQ8N5L8 163 aaKnown RBP11.18□□□□□ -0.62
RPA3-201ENST00000223129 DEFB125Q8N687 156 aa11.18□□□□□ -0.62
RPA3-201ENST00000223129 FAM167A-AS1Q96KT0 104 aa11.18□□□□□ -0.62
RPA3-201ENST00000223129 MRPL32Q9BYC8 188 aaKnown RBP11.18□□□□□ -0.62
RPA3-201ENST00000223129 RPRMQ9NS64 109 aa11.18□□□□□ -0.62
RPA3-201ENST00000223129 RNF24Q9Y225 148 aa11.18□□□□□ -0.62
RPA3-201ENST00000223129 TRAV2A0A0B4J234 112 aa11.17□□□□□ -0.62
RPA3-201ENST00000223129 OR11H12B2RN74 326 aa11.17□□□□□ -0.62
RPA3-201ENST00000223129 ZNF688P0C7X2 276 aa11.17□□□□□ -0.62
RPA3-201ENST00000223129 PYYP10082 97 aa11.17□□□□□ -0.62
RPA3-201ENST00000223129 RHOBP62745 196 aa11.17□□□□□ -0.62
RPA3-201ENST00000223129 ZNF124Q15973 351 aa11.17□□□□□ -0.62
RPA3-201ENST00000223129 DEFB121Q5J5C9 76 aa11.17□□□□□ -0.62
RPA3-201ENST00000223129 IGFL4Q6B9Z1 124 aa11.17□□□□□ -0.62
RPA3-201ENST00000223129 BAP18Q8IXM2 172 aa11.17□□□□□ -0.62
RPA3-201ENST00000223129 RNF141Q8WVD5 230 aa11.17□□□□□ -0.62
RPA3-201ENST00000223129 PLA2G2EQ9NZK7 142 aa11.17□□□□□ -0.62
RPA3-201ENST00000223129 A0A1W2PPV4 95 aa11.16□□□□□ -0.62
RPA3-201ENST00000223129 H3BQ15 152 aa11.16□□□□□ -0.62
RPA3-201ENST00000223129 SOCS3O14543 225 aa11.16□□□□□ -0.62
RPA3-201ENST00000223129 HMGB3O15347 200 aaKnown RBP11.16□□□□□ -0.62
RPA3-201ENST00000223129 APRG1Q8IVJ8 170 aa11.16□□□□□ -0.62
RPA3-201ENST00000223129 SVBPQ8N300 66 aa11.16□□□□□ -0.62
RPA3-201ENST00000223129 MAP6D1Q9H9H5 199 aa11.16□□□□□ -0.62
RPA3-201ENST00000223129 MEGF8Q7Z7M0 2845 aa11.16□□□□□ -0.62
RPA3-201ENST00000223129 MBP02144 154 aa11.16□□□□□ -0.62
RPA3-201ENST00000223129 H2AFB1P0C5Y9 115 aa11.16□□□□□ -0.62
RPA3-201ENST00000223129 IGLC2P0DOY2 106 aa11.16□□□□□ -0.62
RPA3-201ENST00000223129 DEFB131AP59861 70 aa11.16□□□□□ -0.62
RPA3-201ENST00000223129 TMEM41BQ5BJD5 291 aa11.16□□□□□ -0.62
RPA3-201ENST00000223129 C16orf92Q96LL3 132 aa11.16□□□□□ -0.62
RPA3-201ENST00000223129 EIF5AP63241 154 aaKnown RBP11.15□□□□□ -0.62
RPA3-201ENST00000223129 MRAPQ8TCY5 172 aa11.15□□□□□ -0.62
RPA3-201ENST00000223129 ZNF503Q96F45 646 aa11.15□□□□□ -0.62
RPA3-201ENST00000223129 OR51M1Q9H341 326 aa11.15□□□□□ -0.62
RPA3-201ENST00000223129 ZNF586Q9NXT0 402 aa11.15□□□□□ -0.62
RPA3-201ENST00000223129 A0A087X0K7 114 aa11.14□□□□□ -0.63
RPA3-201ENST00000223129 OR7C2O60412 319 aa11.14□□□□□ -0.63
RPA3-201ENST00000223129 OR10J4P0C629 311 aa11.14□□□□□ -0.63
RPA3-201ENST00000223129 SEC11BP0C7V7 166 aa11.14□□□□□ -0.63
RPA3-201ENST00000223129 CDC34P49427 236 aaPredicted RBP11.14□□□□□ -0.63
RPA3-201ENST00000223129 PSMG4Q5JS54 123 aa11.14□□□□□ -0.63
RPA3-201ENST00000223129 C10orf91Q5T1B1 145 aa11.14□□□□□ -0.63
RPA3-201ENST00000223129 AKR1C8PQ5T2L2 129 aa11.14□□□□□ -0.63
RPA3-201ENST00000223129 SSX7Q7RTT5 188 aa11.14□□□□□ -0.63
RPA3-201ENST00000223129 TMED6Q8WW62 240 aa11.14□□□□□ -0.63
RPA3-201ENST00000223129 HRH4Q9H3N8 390 aa11.14□□□□□ -0.63
RPA3-201ENST00000223129 TMEM14CQ9P0S9 112 aa11.14□□□□□ -0.63
RPA3-201ENST00000223129 CARHSP1Q9Y2V2 147 aaKnown RBP11.14□□□□□ -0.63
RPA3-201ENST00000223129 FBN3Q75N90 2809 aa11.14□□□□□ -0.63
RPA3-201ENST00000223129 TRAV8-2A0A0B4J237 113 aa11.14□□□□□ -0.63
RPA3-201ENST00000223129 IGHV4-30-4P0DP06 118 aa11.14□□□□□ -0.63
RPA3-201ENST00000223129 MEOX2P50222 304 aa11.14□□□□□ -0.63
RPA3-201ENST00000223129 RAB24Q969Q5 203 aa11.14□□□□□ -0.63
RPA3-201ENST00000223129 PAXXQ9BUH6 204 aa11.14□□□□□ -0.63
RPA3-201ENST00000223129 SLC17A3O00476 420 aa11.13□□□□□ -0.63
RPA3-201ENST00000223129 HLA-DMBP28068 263 aa11.13□□□□□ -0.63
RPA3-201ENST00000223129 DEFB1P60022 68 aa11.13□□□□□ -0.63
RPA3-201ENST00000223129 SNRPD3P62318 126 aaKnown RBP11.13□□□□□ -0.63
RPA3-201ENST00000223129 ZNF726P1Q15940 193 aa11.13□□□□□ -0.63
RPA3-201ENST00000223129 RNF182Q8N6D2 247 aa11.13□□□□□ -0.63
RPA3-201ENST00000223129 BLNKQ8WV28 456 aa11.13□□□□□ -0.63
RPA3-201ENST00000223129 C20orf173Q96LM9 149 aa11.13□□□□□ -0.63
RPA3-201ENST00000223129 ACTR3CQ9C0K3 210 aaPredicted RBP11.13□□□□□ -0.63
RPA3-201ENST00000223129 ISLRO14498 428 aa11.13□□□□□ -0.63
RPA3-201ENST00000223129 PRB4P10163 310 aaPredicted RBP11.13□□□□□ -0.63
RPA3-201ENST00000223129 HIST1H1EP10412 219 aaKnown RBP11.13□□□□□ -0.63
RPA3-201ENST00000223129 ID1P41134 155 aa11.13□□□□□ -0.63
RPA3-201ENST00000223129 FHITP49789 147 aa11.13□□□□□ -0.63
RPA3-201ENST00000223129 TAS2R45P59539 299 aa11.13□□□□□ -0.63
RPA3-201ENST00000223129 KHDC3LQ587J8 217 aa11.13□□□□□ -0.63
RPA3-201ENST00000223129 FXYD5Q96DB9 178 aa11.13□□□□□ -0.63
RPA3-201ENST00000223129 SAT2Q96F10 170 aaPredicted RBP11.13□□□□□ -0.63
RPA3-201ENST00000223129 FAM110AQ9BQ89 295 aa11.13□□□□□ -0.63
RPA3-201ENST00000223129 SRD5A3Q9H8P0 318 aa11.13□□□□□ -0.63
RPA3-201ENST00000223129 ADCYAP1P18509 176 aa11.12□□□□□ -0.63
RPA3-201ENST00000223129 PSMB3P49720 205 aa11.12□□□□□ -0.63
RPA3-201ENST00000223129 CMC4P56277 68 aaPredicted RBP11.12□□□□□ -0.63
RPA3-201ENST00000223129 LCN15Q6UWW0 184 aa11.12□□□□□ -0.63
RPA3-201ENST00000223129 TUBA4BQ9H853 241 aa11.12□□□□□ -0.63
RPA3-201ENST00000223129 TRBV19A0A075B6N1 114 aa11.11□□□□□ -0.63
RPA3-201ENST00000223129 F8W036 122 aa11.11□□□□□ -0.63
RPA3-201ENST00000223129 NBEAP1P0C6P0 100 aa11.11□□□□□ -0.63
RPA3-201ENST00000223129 STAG3L2P0CL84 134 aa11.11□□□□□ -0.63
RPA3-201ENST00000223129 STAG3L3P0CL85 134 aa11.11□□□□□ -0.63
RPA3-201ENST00000223129 BLOC1S1P78537 153 aa11.11□□□□□ -0.63
RPA3-201ENST00000223129 EIF5AL1Q6IS14 154 aaKnown RBP11.11□□□□□ -0.63
RPA3-201ENST00000223129 ZNF331Q9NQX6 463 aaPredicted RBP11.11□□□□□ -0.63
RPA3-201ENST00000223129 PRKDCP78527 4128 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms