RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 ZNF48Q96MX3 618 aaPredicted RBP17.45■□□□□ 0.38
CCDC9-201ENST00000221922 TRAV8-1A0A0A6YYK1 113 aa17.44■□□□□ 0.38
CCDC9-201ENST00000221922 H3BRN7 92 aa17.44■□□□□ 0.38
CCDC9-201ENST00000221922 ACACBO00763 2458 aa17.44■□□□□ 0.38
CCDC9-201ENST00000221922 Q56UQ5 140 aa17.44■□□□□ 0.38
CCDC9-201ENST00000221922 BPIFA4PQ86YQ2 179 aa17.44■□□□□ 0.38
CCDC9-201ENST00000221922 TACC2O95359 2948 aa17.44■□□□□ 0.38
CCDC9-201ENST00000221922 IGLV11-55A0A075B6I3 123 aa17.44■□□□□ 0.38
CCDC9-201ENST00000221922 NCBP2LA6PVI3 153 aaKnown RBP17.44■□□□□ 0.38
CCDC9-201ENST00000221922 CRXO43186 299 aaPredicted RBP17.44■□□□□ 0.38
CCDC9-201ENST00000221922 FOXA3P55318 350 aaPredicted RBP17.44■□□□□ 0.38
CCDC9-201ENST00000221922 EXOC3-AS1Q8N2X6 119 aa17.44■□□□□ 0.38
CCDC9-201ENST00000221922 CIARTQ8N365 385 aaPredicted RBP17.44■□□□□ 0.38
CCDC9-201ENST00000221922 TTC9CQ8N5M4 171 aa17.44■□□□□ 0.38
CCDC9-201ENST00000221922 RNF125Q96EQ8 232 aa17.44■□□□□ 0.38
CCDC9-201ENST00000221922 NDFIP1Q9BT67 221 aa17.44■□□□□ 0.38
CCDC9-201ENST00000221922 C1RLQ9NZP8 487 aa17.44■□□□□ 0.38
CCDC9-201ENST00000221922 MRPS16Q9Y3D3 137 aaKnown RBP17.44■□□□□ 0.38
CCDC9-201ENST00000221922 HAX1O00165 279 aa17.43■□□□□ 0.38
CCDC9-201ENST00000221922 APOHP02749 345 aaPredicted RBP17.43■□□□□ 0.38
CCDC9-201ENST00000221922 COL8A1P27658 744 aa17.43■□□□□ 0.38
CCDC9-201ENST00000221922 MFAP4P55083 255 aa17.43■□□□□ 0.38
CCDC9-201ENST00000221922 GOLT1AQ6ZVE7 132 aa17.43■□□□□ 0.38
CCDC9-201ENST00000221922 OR4F17Q8NGA8 305 aa17.43■□□□□ 0.38
CCDC9-201ENST00000221922 TMEM70Q9BUB7 260 aa17.43■□□□□ 0.38
CCDC9-201ENST00000221922 LOC102724200A0A096LPH7 203 aaPredicted RBP17.43■□□□□ 0.38
CCDC9-201ENST00000221922 GNG7O60262 68 aa17.43■□□□□ 0.38
CCDC9-201ENST00000221922 GOSR1O95249 250 aa17.43■□□□□ 0.38
CCDC9-201ENST00000221922 TSPOP30536 169 aa17.43■□□□□ 0.38
CCDC9-201ENST00000221922 LMO4P61968 165 aa17.43■□□□□ 0.38
CCDC9-201ENST00000221922 PRR31Q5SQ13 230 aa17.43■□□□□ 0.38
CCDC9-201ENST00000221922 DYNAPQ8N1N2 210 aa17.43■□□□□ 0.38
CCDC9-201ENST00000221922 ZNF491Q8N8L2 437 aa17.43■□□□□ 0.38
CCDC9-201ENST00000221922 IGFBPL1Q8WX77 278 aa17.43■□□□□ 0.38
CCDC9-201ENST00000221922 TRBV19A0A075B6N1 114 aa17.42■□□□□ 0.38
CCDC9-201ENST00000221922 ZNF785A8K8V0 405 aa17.42■□□□□ 0.38
CCDC9-201ENST00000221922 NPSP0C0P6 89 aa17.42■□□□□ 0.38
CCDC9-201ENST00000221922 TMEM11P17152 192 aa17.42■□□□□ 0.38
CCDC9-201ENST00000221922 TFPI2P48307 235 aa17.42■□□□□ 0.38
CCDC9-201ENST00000221922 FBLN7Q53RD9 439 aa17.42■□□□□ 0.38
CCDC9-201ENST00000221922 SPATA12Q7Z6I5 190 aa17.42■□□□□ 0.38
CCDC9-201ENST00000221922 PRNTQ86SH4 94 aa17.42■□□□□ 0.38
CCDC9-201ENST00000221922 STPG4Q8N801 248 aa17.42■□□□□ 0.38
CCDC9-201ENST00000221922 FANCD2OSQ96PS1 177 aa17.42■□□□□ 0.38
CCDC9-201ENST00000221922 BPESC1Q9GZL8 116 aa17.42■□□□□ 0.38
CCDC9-201ENST00000221922 THYN1Q9P016 225 aa17.42■□□□□ 0.38
CCDC9-201ENST00000221922 ZFP30Q9Y2G7 519 aa17.42■□□□□ 0.38
CCDC9-201ENST00000221922 WI2-2373I1.2A0A1W2PRP0 233 aa17.41■□□□□ 0.38
CCDC9-201ENST00000221922 IL4P05112 153 aa17.41■□□□□ 0.38
CCDC9-201ENST00000221922 KLF17Q5JT82 389 aaPredicted RBP17.41■□□□□ 0.38
CCDC9-201ENST00000221922 DMRTA1Q5VZB9 504 aa17.41■□□□□ 0.38
CCDC9-201ENST00000221922 LYPD1Q8N2G4 141 aa17.41■□□□□ 0.38
CCDC9-201ENST00000221922 TMEM75Q8N9X5 138 aa17.41■□□□□ 0.38
CCDC9-201ENST00000221922 CLEC5AQ9NY25 188 aa17.41■□□□□ 0.38
CCDC9-201ENST00000221922 IGHV1-24A0A0C4DH33 117 aa17.4■□□□□ 0.38
CCDC9-201ENST00000221922 TOX4O94842 621 aa17.4■□□□□ 0.38
CCDC9-201ENST00000221922 LINC00614P0C842 121 aa17.4■□□□□ 0.38
CCDC9-201ENST00000221922 IGLL1P15814 213 aa17.4■□□□□ 0.38
CCDC9-201ENST00000221922 SH2D7A6NKC9 451 aaPredicted RBP17.4■□□□□ 0.38
CCDC9-201ENST00000221922 CHEK1O14757 476 aa17.4■□□□□ 0.38
CCDC9-201ENST00000221922 UBE2E1P51965 193 aa17.4■□□□□ 0.38
CCDC9-201ENST00000221922 NDPQ00604 133 aa17.4■□□□□ 0.38
CCDC9-201ENST00000221922 M0QZ24 198 aa17.39■□□□□ 0.37
CCDC9-201ENST00000221922 SCGB2A1O75556 95 aa17.39■□□□□ 0.37
CCDC9-201ENST00000221922 FAM106CPP0CH98 169 aa17.39■□□□□ 0.37
CCDC9-201ENST00000221922 CYB5R2Q6BCY4 276 aa17.39■□□□□ 0.37
CCDC9-201ENST00000221922 Q71RC1 249 aaPredicted RBP17.39■□□□□ 0.37
CCDC9-201ENST00000221922 HLA-DRB1P01911 266 aa17.38■□□□□ 0.37
CCDC9-201ENST00000221922 SIGLEC15Q6ZMC9 328 aa17.38■□□□□ 0.37
CCDC9-201ENST00000221922 C21orf62Q9NYP8 219 aa17.38■□□□□ 0.37
CCDC9-201ENST00000221922 WNK2Q9Y3S1 2297 aa17.38■□□□□ 0.37
CCDC9-201ENST00000221922 ZC2HC1AQ96GY0 325 aa17.38■□□□□ 0.37
CCDC9-201ENST00000221922 C17orf77Q96MU5 243 aa17.38■□□□□ 0.37
CCDC9-201ENST00000221922 MRPS12O15235 138 aaKnown RBP17.37■□□□□ 0.37
CCDC9-201ENST00000221922 NDUFB8O95169 186 aa17.37■□□□□ 0.37
CCDC9-201ENST00000221922 IGHV4-39P01824 125 aa17.37■□□□□ 0.37
CCDC9-201ENST00000221922 GATD1Q8NB37 220 aa17.37■□□□□ 0.37
CCDC9-201ENST00000221922 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.36■□□□□ 0.37
CCDC9-201ENST00000221922 SYS1-DBNDD2H3BUS1 97 aa17.36■□□□□ 0.37
CCDC9-201ENST00000221922 K7EQM0 130 aa17.36■□□□□ 0.37
CCDC9-201ENST00000221922 OR5AL1P0C617 328 aa17.36■□□□□ 0.37
CCDC9-201ENST00000221922 FCGR2BP31994 310 aaPredicted RBP17.36■□□□□ 0.37
CCDC9-201ENST00000221922 LEPROTL1O95214 131 aa17.36■□□□□ 0.37
CCDC9-201ENST00000221922 A0A1B0GUT8 65 aa17.35■□□□□ 0.37
CCDC9-201ENST00000221922 PDE6HQ13956 83 aa17.35■□□□□ 0.37
CCDC9-201ENST00000221922 PSG3Q16557 428 aa17.35■□□□□ 0.37
CCDC9-201ENST00000221922 ZNF414Q96IQ9 312 aa17.35■□□□□ 0.37
CCDC9-201ENST00000221922 PSG8Q9UQ74 426 aa17.35■□□□□ 0.37
CCDC9-201ENST00000221922 S4R3C0 116 aa17.35■□□□□ 0.37
CCDC9-201ENST00000221922 CFAP46Q8IYW2 2715 aa17.35■□□□□ 0.37
CCDC9-201ENST00000221922 IGHV7-81A0A0B4J1V7 117 aa17.35■□□□□ 0.37
CCDC9-201ENST00000221922 OR4C46A6NHA9 309 aa17.35■□□□□ 0.37
CCDC9-201ENST00000221922 LINC00173Q6ZV60 143 aa17.35■□□□□ 0.37
CCDC9-201ENST00000221922 Q8N9W7 124 aa17.35■□□□□ 0.37
CCDC9-201ENST00000221922 AJUBAQ96IF1 538 aa17.35■□□□□ 0.37
CCDC9-201ENST00000221922 F8W735 103 aaPredicted RBP17.34■□□□□ 0.37
CCDC9-201ENST00000221922 RIGQ13278 110 aa17.33■□□□□ 0.37
CCDC9-201ENST00000221922 ST20Q9HBF5 79 aa17.33■□□□□ 0.37
CCDC9-201ENST00000221922 A0A1B0GW15 77 aa17.33■□□□□ 0.36
CCDC9-201ENST00000221922 EGR2P11161 476 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms