RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 PAGE4O60829 102 aa12.57□□□□□ -0.4
POLR2E-201ENST00000215587 BCL2P10415 239 aa12.57□□□□□ -0.4
POLR2E-201ENST00000215587 RPL11P62913 178 aaKnown RBP12.57□□□□□ -0.4
POLR2E-201ENST00000215587 TOR2AQ5JU69 321 aa12.57□□□□□ -0.4
POLR2E-201ENST00000215587 TCF24Q7RTU0 167 aa12.57□□□□□ -0.4
POLR2E-201ENST00000215587 ZNF586Q9NXT0 402 aa12.57□□□□□ -0.4
POLR2E-201ENST00000215587 TRBV19A0A075B6N1 114 aa12.56□□□□□ -0.4
POLR2E-201ENST00000215587 H3BTX0 84 aa12.56□□□□□ -0.4
POLR2E-201ENST00000215587 SNRPCP09234 159 aaKnown RBP12.56□□□□□ -0.4
POLR2E-201ENST00000215587 PDE6HQ13956 83 aa12.56□□□□□ -0.4
POLR2E-201ENST00000215587 CST9LP1Q5W188 147 aa12.56□□□□□ -0.4
POLR2E-201ENST00000215587 LINC00482Q8N8I6 264 aa12.56□□□□□ -0.4
POLR2E-201ENST00000215587 VAX2Q9UIW0 290 aa12.56□□□□□ -0.4
POLR2E-201ENST00000215587 SMAD5-AS1Q9Y6J3 95 aa12.56□□□□□ -0.4
POLR2E-201ENST00000215587 LOC102723971A0A1B0GUV8 181 aa12.55□□□□□ -0.4
POLR2E-201ENST00000215587 A0A1W2PRE2 83 aa12.55□□□□□ -0.4
POLR2E-201ENST00000215587 ZNF506Q5JVG8 444 aa12.55□□□□□ -0.4
POLR2E-201ENST00000215587 ADAMTSL5Q6ZMM2 481 aa12.55□□□□□ -0.4
POLR2E-201ENST00000215587 SIGLEC8Q9NYZ4 499 aa12.55□□□□□ -0.4
POLR2E-201ENST00000215587 MLXQ9UH92 298 aa12.55□□□□□ -0.4
POLR2E-201ENST00000215587 YTHDF2Q9Y5A9 579 aaKnown RBP12.55□□□□□ -0.4
POLR2E-201ENST00000215587 FAM74A7A6NL05 159 aa12.54□□□□□ -0.4
POLR2E-201ENST00000215587 ZNF253O75346 499 aa12.54□□□□□ -0.4
POLR2E-201ENST00000215587 RANP62826 216 aaKnown RBP12.54□□□□□ -0.4
POLR2E-201ENST00000215587 PSG9Q00887 426 aa12.54□□□□□ -0.4
POLR2E-201ENST00000215587 PEA15Q15121 130 aa12.54□□□□□ -0.4
POLR2E-201ENST00000215587 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.54□□□□□ -0.4
POLR2E-201ENST00000215587 LYPD1Q8N2G4 141 aa12.54□□□□□ -0.4
POLR2E-201ENST00000215587 TXNDC17Q9BRA2 123 aa12.54□□□□□ -0.4
POLR2E-201ENST00000215587 SLC50A1Q9BRV3 221 aa12.54□□□□□ -0.4
POLR2E-201ENST00000215587 NKX6-2Q9C056 277 aaPredicted RBP12.54□□□□□ -0.4
POLR2E-201ENST00000215587 NRN1Q9NPD7 142 aa12.54□□□□□ -0.4
POLR2E-201ENST00000215587 C11orf94C9JXX5 98 aa12.53□□□□□ -0.4
POLR2E-201ENST00000215587 SAP30O75446 220 aa12.53□□□□□ -0.4
POLR2E-201ENST00000215587 MEF2BQ02080 365 aaPredicted RBP12.53□□□□□ -0.4
POLR2E-201ENST00000215587 ICAM4Q14773 271 aa12.53□□□□□ -0.4
POLR2E-201ENST00000215587 SAMD13Q5VXD3 122 aa12.53□□□□□ -0.4
POLR2E-201ENST00000215587 RXFP4Q8TDU9 374 aa12.53□□□□□ -0.4
POLR2E-201ENST00000215587 C17orf77Q96MU5 243 aa12.53□□□□□ -0.4
POLR2E-201ENST00000215587 RARRES2Q99969 163 aa12.53□□□□□ -0.4
POLR2E-201ENST00000215587 Q9H3A6 140 aa12.53□□□□□ -0.4
POLR2E-201ENST00000215587 AAMDCQ9H7C9 122 aa12.53□□□□□ -0.4
POLR2E-201ENST00000215587 TREM1Q9NP99 234 aa12.53□□□□□ -0.4
POLR2E-201ENST00000215587 OTORQ9NRC9 128 aa12.53□□□□□ -0.4
POLR2E-201ENST00000215587 SELENOKQ9Y6D0 94 aa12.53□□□□□ -0.4
POLR2E-201ENST00000215587 IGKV3-7A0A075B6H7 116 aa12.52□□□□□ -0.41
POLR2E-201ENST00000215587 SLC17A3O00476 420 aa12.52□□□□□ -0.41
POLR2E-201ENST00000215587 NDUFB4O95168 129 aa12.52□□□□□ -0.41
POLR2E-201ENST00000215587 ATP5G3P48201 142 aa12.52□□□□□ -0.41
POLR2E-201ENST00000215587 PAFAH1B2P68402 229 aa12.52□□□□□ -0.41
POLR2E-201ENST00000215587 FAM90A2PQ658T7 463 aa12.52□□□□□ -0.41
POLR2E-201ENST00000215587 UQCC3Q6UW78 93 aa12.52□□□□□ -0.41
POLR2E-201ENST00000215587 RBPMS2Q6ZRY4 209 aaKnown RBP12.52□□□□□ -0.41
POLR2E-201ENST00000215587 SMDT1Q9H4I9 107 aa12.52□□□□□ -0.41
POLR2E-201ENST00000215587 GGTLC3B5MD39 225 aa12.51□□□□□ -0.41
POLR2E-201ENST00000215587 DNASE2O00115 360 aaPredicted RBP12.51□□□□□ -0.41
POLR2E-201ENST00000215587 SUMO1P63165 101 aaKnown RBP12.51□□□□□ -0.41
POLR2E-201ENST00000215587 DEFB114Q30KQ6 69 aa12.51□□□□□ -0.41
POLR2E-201ENST00000215587 EIF4E3Q8N5X7 224 aaKnown RBP12.51□□□□□ -0.41
POLR2E-201ENST00000215587 C16orf92Q96LL3 132 aa12.51□□□□□ -0.41
POLR2E-201ENST00000215587 ZNF331Q9NQX6 463 aaPredicted RBP12.51□□□□□ -0.41
POLR2E-201ENST00000215587 TRAV25A0A0B4J276 109 aa12.5□□□□□ -0.41
POLR2E-201ENST00000215587 PGPA6NDG6 321 aa12.5□□□□□ -0.41
POLR2E-201ENST00000215587 F6UZH7 168 aa12.5□□□□□ -0.41
POLR2E-201ENST00000215587 PDE6DO43924 150 aa12.5□□□□□ -0.41
POLR2E-201ENST00000215587 SLC25A5P05141 298 aaKnown RBP12.5□□□□□ -0.41
POLR2E-201ENST00000215587 CD33P20138 364 aa12.5□□□□□ -0.41
POLR2E-201ENST00000215587 SLC7A5P1Q8MH63 180 aa12.5□□□□□ -0.41
POLR2E-201ENST00000215587 GBGT1Q8N5D6 347 aa12.5□□□□□ -0.41
POLR2E-201ENST00000215587 CMTM2Q8TAZ6 248 aa12.5□□□□□ -0.41
POLR2E-201ENST00000215587 TCEAL7Q9BRU2 100 aa12.5□□□□□ -0.41
POLR2E-201ENST00000215587 MCRIP2Q9BUT9 160 aaKnown RBP12.5□□□□□ -0.41
POLR2E-201ENST00000215587 MS4A6AQ9H2W1 248 aa12.5□□□□□ -0.41
POLR2E-201ENST00000215587 CLEC5AQ9NY25 188 aa12.5□□□□□ -0.41
POLR2E-201ENST00000215587 ID1P41134 155 aa12.49□□□□□ -0.41
POLR2E-201ENST00000215587 CD81P60033 236 aa12.49□□□□□ -0.41
POLR2E-201ENST00000215587 SRSF3P84103 164 aaKnown RBP12.49□□□□□ -0.41
POLR2E-201ENST00000215587 CD300EQ496F6 205 aaPredicted RBP12.49□□□□□ -0.41
POLR2E-201ENST00000215587 TMEM61Q8N0U2 210 aa12.49□□□□□ -0.41
POLR2E-201ENST00000215587 EXOC3-AS1Q8N2X6 119 aa12.49□□□□□ -0.41
POLR2E-201ENST00000215587 C5orf17Q8NAS9 161 aa12.49□□□□□ -0.41
POLR2E-201ENST00000215587 OR2K2Q8NGT1 345 aa12.49□□□□□ -0.41
POLR2E-201ENST00000215587 CITED4Q96RK1 184 aa12.49□□□□□ -0.41
POLR2E-201ENST00000215587 PRELID1Q9Y255 219 aa12.49□□□□□ -0.41
POLR2E-201ENST00000215587 NOTCH1P46531 2555 aa12.49□□□□□ -0.41
POLR2E-201ENST00000215587 TRAV2A0A0B4J234 112 aa12.48□□□□□ -0.41
POLR2E-201ENST00000215587 ISLRO14498 428 aa12.48□□□□□ -0.41
POLR2E-201ENST00000215587 TSPAN4O14817 238 aa12.48□□□□□ -0.41
POLR2E-201ENST00000215587 NDUFS6O75380 124 aaKnown RBP12.48□□□□□ -0.41
POLR2E-201ENST00000215587 CSN1S1P47710 185 aa12.48□□□□□ -0.41
POLR2E-201ENST00000215587 TFPI2P48307 235 aa12.48□□□□□ -0.41
POLR2E-201ENST00000215587 INSL3P51460 131 aa12.48□□□□□ -0.41
POLR2E-201ENST00000215587 C9orf66Q5T8R8 295 aa12.48□□□□□ -0.41
POLR2E-201ENST00000215587 WFDC3Q8IUB2 231 aa12.48□□□□□ -0.41
POLR2E-201ENST00000215587 TMEM250H0YL14 139 aa12.47□□□□□ -0.41
POLR2E-201ENST00000215587 SOCS3O14543 225 aa12.47□□□□□ -0.41
POLR2E-201ENST00000215587 IGLV1-51P01701 117 aa12.47□□□□□ -0.41
POLR2E-201ENST00000215587 SRP19P09132 144 aaKnown RBP12.47□□□□□ -0.41
POLR2E-201ENST00000215587 LCN12Q6JVE5 192 aa12.47□□□□□ -0.41
POLR2E-201ENST00000215587 CCDC28AQ8IWP9 274 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms