RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 TMPRSS5Q9H3S3 457 aa13.38□□□□□ -0.27
PHGDH-234ENST00000642041 SDF2L1Q9HCN8 221 aa13.38□□□□□ -0.27
PHGDH-234ENST00000642041 PUS1Q9Y606 427 aaKnown RBP eCLIP13.38□□□□□ -0.27
PHGDH-234ENST00000642041 MDFIC2A0A1B0GVS7 189 aa13.37□□□□□ -0.27
PHGDH-234ENST00000642041 C7orf77A4D0Y5 90 aa13.37□□□□□ -0.27
PHGDH-234ENST00000642041 OR2J3O76001 311 aa13.37□□□□□ -0.27
PHGDH-234ENST00000642041 HIST1H1EP10412 219 aaKnown RBP13.37□□□□□ -0.27
PHGDH-234ENST00000642041 GATA2P23769 480 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-234ENST00000642041 SLC35B1P78383 322 aa13.37□□□□□ -0.27
PHGDH-234ENST00000642041 C15orf32Q32M92 178 aa13.37□□□□□ -0.27
PHGDH-234ENST00000642041 C19orf54Q5BKX5 351 aa13.37□□□□□ -0.27
PHGDH-234ENST00000642041 PATE2Q6UY27 113 aa13.37□□□□□ -0.27
PHGDH-234ENST00000642041 C15orf54Q8N8G6 183 aa13.37□□□□□ -0.27
PHGDH-234ENST00000642041 ZNF491Q8N8L2 437 aa13.37□□□□□ -0.27
PHGDH-234ENST00000642041 ANAPC16Q96DE5 110 aa13.37□□□□□ -0.27
PHGDH-234ENST00000642041 MRPL36Q9P0J6 103 aaKnown RBP13.37□□□□□ -0.27
PHGDH-234ENST00000642041 RNF114Q9Y508 228 aa13.37□□□□□ -0.27
PHGDH-234ENST00000642041 C9JCJ5 164 aa13.36□□□□□ -0.27
PHGDH-234ENST00000642041 HOXA3O43365 443 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-234ENST00000642041 AMY1AP04745 511 aa13.36□□□□□ -0.27
PHGDH-234ENST00000642041 CEBPGP53567 150 aa13.36□□□□□ -0.27
PHGDH-234ENST00000642041 RPL15P61313 204 aaKnown RBP13.36□□□□□ -0.27
PHGDH-234ENST00000642041 LYZP61626 148 aa13.36□□□□□ -0.27
PHGDH-234ENST00000642041 BTN1A1Q13410 526 aa13.36□□□□□ -0.27
PHGDH-234ENST00000642041 PDE6HQ13956 83 aa13.36□□□□□ -0.27
PHGDH-234ENST00000642041 TIGITQ495A1 244 aa13.36□□□□□ -0.27
PHGDH-234ENST00000642041 OR4F17Q8NGA8 305 aa13.36□□□□□ -0.27
PHGDH-234ENST00000642041 SMIM12Q96EX1 92 aa13.36□□□□□ -0.27
PHGDH-234ENST00000642041 FAM167A-AS1Q96KT0 104 aa13.36□□□□□ -0.27
PHGDH-234ENST00000642041 SHANK2-AS3Q9BTD1 123 aa13.36□□□□□ -0.27
PHGDH-234ENST00000642041 SLC25A2Q9BXI2 301 aa13.36□□□□□ -0.27
PHGDH-234ENST00000642041 SLC25A39Q9BZJ4 359 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-234ENST00000642041 RPS10P5Q9NQ39 176 aa13.36□□□□□ -0.27
PHGDH-234ENST00000642041 BIN3Q9NQY0 253 aa13.36□□□□□ -0.27
PHGDH-234ENST00000642041 SOX21Q9Y651 276 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-234ENST00000642041 FBLL1A6NHQ2 334 aaKnown RBP13.35□□□□□ -0.27
PHGDH-234ENST00000642041 RPL7P18124 248 aaKnown RBP13.35□□□□□ -0.27
PHGDH-234ENST00000642041 TAS2R60P59551 318 aa13.35□□□□□ -0.27
PHGDH-234ENST00000642041 C9orf152Q5JTZ5 239 aa13.35□□□□□ -0.27
PHGDH-234ENST00000642041 TMEM219Q86XT9 240 aa13.35□□□□□ -0.27
PHGDH-234ENST00000642041 KRTAP17-1Q9BYP8 105 aa13.35□□□□□ -0.27
PHGDH-234ENST00000642041 PARLQ9H300 379 aa13.35□□□□□ -0.27
PHGDH-234ENST00000642041 CLEC5AQ9NY25 188 aa13.35□□□□□ -0.27
PHGDH-234ENST00000642041 RABAC1Q9UI14 185 aa13.35□□□□□ -0.27
PHGDH-234ENST00000642041 RYR2Q92736 4967 aa13.35□□□□□ -0.27
PHGDH-234ENST00000642041 TGOLN2O43493 480 aa13.34□□□□□ -0.27
PHGDH-234ENST00000642041 IGHV4-59P01825 116 aa13.34□□□□□ -0.27
PHGDH-234ENST00000642041 IL4P05112 153 aa13.34□□□□□ -0.27
PHGDH-234ENST00000642041 CTSGP08311 255 aa13.34□□□□□ -0.27
PHGDH-234ENST00000642041 NBEAP1P0C6P0 100 aa13.34□□□□□ -0.27
PHGDH-234ENST00000642041 PPIFP30405 207 aaKnown RBP13.34□□□□□ -0.27
PHGDH-234ENST00000642041 RPL19P84098 196 aaKnown RBP13.34□□□□□ -0.27
PHGDH-234ENST00000642041 LY6EQ16553 131 aa13.34□□□□□ -0.27
PHGDH-234ENST00000642041 C1orf194Q5T5A4 169 aa13.34□□□□□ -0.27
PHGDH-234ENST00000642041 DNAH9Q9NYC9 4486 aa13.33□□□□□ -0.27
PHGDH-234ENST00000642041 SERTM2A0A1B0GWG4 89 aa13.33□□□□□ -0.28
PHGDH-234ENST00000642041 ZNF253O75346 499 aa13.33□□□□□ -0.28
PHGDH-234ENST00000642041 IGHV3-48P01763 117 aa13.33□□□□□ -0.28
PHGDH-234ENST00000642041 TRGV3P03979 118 aa13.33□□□□□ -0.28
PHGDH-234ENST00000642041 PROK1P58294 105 aa13.33□□□□□ -0.28
PHGDH-234ENST00000642041 SPATA31B1PQ5VZV4 182 aa13.33□□□□□ -0.28
PHGDH-234ENST00000642041 HELTA6NFD8 242 aa13.32□□□□□ -0.28
PHGDH-234ENST00000642041 H3BRN7 92 aa13.32□□□□□ -0.28
PHGDH-234ENST00000642041 K7EQM0 130 aa13.32□□□□□ -0.28
PHGDH-234ENST00000642041 TSPAN4O14817 238 aa13.32□□□□□ -0.28
PHGDH-234ENST00000642041 CLEC3BP05452 202 aa13.32□□□□□ -0.28
PHGDH-234ENST00000642041 UBE2G2P60604 165 aa13.32□□□□□ -0.28
PHGDH-234ENST00000642041 PSG9Q00887 426 aa13.32□□□□□ -0.28
PHGDH-234ENST00000642041 RNF212Q495C1 297 aa13.32□□□□□ -0.28
PHGDH-234ENST00000642041 LINC01006Q8NI28 216 aa13.32□□□□□ -0.28
PHGDH-234ENST00000642041 IGHV3-21A0A0B4J1V1 117 aa13.31□□□□□ -0.28
PHGDH-234ENST00000642041 DNASE2O00115 360 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-234ENST00000642041 NDUFB4O95168 129 aa13.31□□□□□ -0.28
PHGDH-234ENST00000642041 IGLV1-40P01703 118 aa13.31□□□□□ -0.28
PHGDH-234ENST00000642041 ELANEP08246 267 aa13.31□□□□□ -0.28
PHGDH-234ENST00000642041 BMI1P35226 326 aa13.31□□□□□ -0.28
PHGDH-234ENST00000642041 SUMO1P63165 101 aaKnown RBP13.31□□□□□ -0.28
PHGDH-234ENST00000642041 C5orf17Q8NAS9 161 aa13.31□□□□□ -0.28
PHGDH-234ENST00000642041 FXYD5Q96DB9 178 aa13.31□□□□□ -0.28
PHGDH-234ENST00000642041 ZNF503Q96F45 646 aa13.31□□□□□ -0.28
PHGDH-234ENST00000642041 IMMP2LQ96T52 175 aa13.31□□□□□ -0.28
PHGDH-234ENST00000642041 CHRDL1Q9BU40 450 aa13.31□□□□□ -0.28
PHGDH-234ENST00000642041 OTORQ9NRC9 128 aa13.31□□□□□ -0.28
PHGDH-234ENST00000642041 A0A1W2PS18 150 aa13.3□□□□□ -0.28
PHGDH-234ENST00000642041 ZNF98A6NK75 572 aa13.3□□□□□ -0.28
PHGDH-234ENST00000642041 G3V318 75 aa13.3□□□□□ -0.28
PHGDH-234ENST00000642041 IGHG4P01861 327 aa13.3□□□□□ -0.28
PHGDH-234ENST00000642041 S100PP25815 95 aa13.3□□□□□ -0.28
PHGDH-234ENST00000642041 CNN1P51911 297 aaKnown RBP13.3□□□□□ -0.28
PHGDH-234ENST00000642041 ZNF343Q6P1L6 599 aa13.3□□□□□ -0.28
PHGDH-234ENST00000642041 ATRAIDQ6UW56 229 aa13.3□□□□□ -0.28
PHGDH-234ENST00000642041 WWC2-AS2Q96NR7 200 aa13.3□□□□□ -0.28
PHGDH-234ENST00000642041 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.29□□□□□ -0.28
PHGDH-234ENST00000642041 OR2T8A6NH00 312 aa13.29□□□□□ -0.28
PHGDH-234ENST00000642041 F8W735 103 aaPredicted RBP13.29□□□□□ -0.28
PHGDH-234ENST00000642041 NDUFA4O00483 81 aa13.29□□□□□ -0.28
PHGDH-234ENST00000642041 ATP5G3P48201 142 aa13.29□□□□□ -0.28
PHGDH-234ENST00000642041 TPPP2P59282 170 aa13.29□□□□□ -0.28
PHGDH-234ENST00000642041 ZNF674Q2M3X9 581 aa13.29□□□□□ -0.28
PHGDH-234ENST00000642041 TEX38Q6PEX7 206 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms