RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	LINC00173	Q6ZV60	143 aa		13.3	□□□□□ -0.28
PHGDH-223	ENST00000641597	SSX8	Q7RTT4	187 aa		13.3	□□□□□ -0.28
PHGDH-223	ENST00000641597	WIPF2	Q8TF74	440 aa	Predicted RBP	13.3	□□□□□ -0.28
PHGDH-223	ENST00000641597	RASL11B	Q9BPW5	248 aa		13.3	□□□□□ -0.28
PHGDH-223	ENST00000641597	IGHV3OR16-8	A0A075B7F1	116 aa		13.3	□□□□□ -0.28
PHGDH-223	ENST00000641597	HSBP1	O75506	76 aa		13.3	□□□□□ -0.28
PHGDH-223	ENST00000641597	TOMM40	O96008	361 aa		13.3	□□□□□ -0.28
PHGDH-223	ENST00000641597		P01737	135 aa		13.3	□□□□□ -0.28
PHGDH-223	ENST00000641597	CTRL	P40313	264 aa		13.3	□□□□□ -0.28
PHGDH-223	ENST00000641597	STXBP6	Q8NFX7	210 aa		13.3	□□□□□ -0.28
PHGDH-223	ENST00000641597	ITPR1	Q14643	2758 aa		13.3	□□□□□ -0.28
PHGDH-223	ENST00000641597		M0R3E3	92 aa		13.29	□□□□□ -0.28
PHGDH-223	ENST00000641597		Q56UQ5	140 aa		13.29	□□□□□ -0.28
PHGDH-223	ENST00000641597	PRSS22	Q9GZN4	317 aa		13.29	□□□□□ -0.28
PHGDH-223	ENST00000641597	C19orf71	A6NCJ1	209 aa		13.29	□□□□□ -0.28
PHGDH-223	ENST00000641597	HES1	Q14469	280 aa		13.29	□□□□□ -0.28
PHGDH-223	ENST00000641597	MCRIP2	Q9BUT9	160 aa	Known RBP	13.29	□□□□□ -0.28
PHGDH-223	ENST00000641597		M0R2Z0	102 aa		13.28	□□□□□ -0.28
PHGDH-223	ENST00000641597	ZNF25	P17030	456 aa	Predicted RBP	13.28	□□□□□ -0.28
PHGDH-223	ENST00000641597	RBPJ	Q06330	500 aa		13.28	□□□□□ -0.28
PHGDH-223	ENST00000641597		Q86TA4	180 aa		13.28	□□□□□ -0.28
PHGDH-223	ENST00000641597	DYNAP	Q8N1N2	210 aa		13.28	□□□□□ -0.28
PHGDH-223	ENST00000641597	TNFRSF14	Q92956	283 aa		13.28	□□□□□ -0.28
PHGDH-223	ENST00000641597	COX19	Q49B96	90 aa		13.28	□□□□□ -0.28
PHGDH-223	ENST00000641597	FAM181B	A6NEQ2	426 aa		13.27	□□□□□ -0.28
PHGDH-223	ENST00000641597	BORCS7	Q96B45	105 aa		13.27	□□□□□ -0.28
PHGDH-223	ENST00000641597	IL4	P05112	153 aa		13.27	□□□□□ -0.29
PHGDH-223	ENST00000641597	COL8A1	P27658	744 aa		13.27	□□□□□ -0.29
PHGDH-223	ENST00000641597	PLP1	P60201	277 aa		13.27	□□□□□ -0.29
PHGDH-223	ENST00000641597	HBB	P68871	147 aa		13.27	□□□□□ -0.29
PHGDH-223	ENST00000641597	OR8B3	Q8NGG8	313 aa		13.27	□□□□□ -0.29
PHGDH-223	ENST00000641597	FMC1	Q96HJ9	113 aa		13.27	□□□□□ -0.29
PHGDH-223	ENST00000641597	OR8B2	Q96RD0	313 aa		13.27	□□□□□ -0.29
PHGDH-223	ENST00000641597	IGHV3-35	A0A0C4DH35	117 aa		13.27	□□□□□ -0.29
PHGDH-223	ENST00000641597	NDUFS7	O75251	213 aa		13.27	□□□□□ -0.29
PHGDH-223	ENST00000641597	NDP	Q00604	133 aa		13.27	□□□□□ -0.29
PHGDH-223	ENST00000641597	ZC2HC1A	Q96GY0	325 aa		13.27	□□□□□ -0.29
PHGDH-223	ENST00000641597	RBM14	Q96PK6	669 aa	Known RBP	13.27	□□□□□ -0.29
PHGDH-223	ENST00000641597	MRPL27	Q9P0M9	148 aa	Known RBP	13.27	□□□□□ -0.29
PHGDH-223	ENST00000641597	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.27	□□□□□ -0.29
PHGDH-223	ENST00000641597	HTR1D	P28221	377 aa		13.26	□□□□□ -0.29
PHGDH-223	ENST00000641597	CFHR4	Q92496	578 aa		13.26	□□□□□ -0.29
PHGDH-223	ENST00000641597	LIPF	P07098	398 aa		13.26	□□□□□ -0.29
PHGDH-223	ENST00000641597	FCGR2B	P31994	310 aa	Predicted RBP	13.26	□□□□□ -0.29
PHGDH-223	ENST00000641597	CA7	P43166	264 aa		13.26	□□□□□ -0.29
PHGDH-223	ENST00000641597	OR4B1	Q8NGF8	309 aa		13.26	□□□□□ -0.29
PHGDH-223	ENST00000641597	DAZAP1	Q96EP5	407 aa	Known RBP	13.26	□□□□□ -0.29
PHGDH-223	ENST00000641597	TPPP3	Q9BW30	176 aa		13.26	□□□□□ -0.29
PHGDH-223	ENST00000641597	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.26	□□□□□ -0.29
PHGDH-223	ENST00000641597	OVOL3	O00110	214 aa		13.25	□□□□□ -0.29
PHGDH-223	ENST00000641597	OR2J3	O76001	311 aa		13.25	□□□□□ -0.29
PHGDH-223	ENST00000641597	IGLC2	P0DOY2	106 aa		13.25	□□□□□ -0.29
PHGDH-223	ENST00000641597	IGLC3	P0DOY3	106 aa		13.25	□□□□□ -0.29
PHGDH-223	ENST00000641597	ADORA2A-AS1	P86434	159 aa		13.25	□□□□□ -0.29
PHGDH-223	ENST00000641597		Q6ZVH6	145 aa		13.25	□□□□□ -0.29
PHGDH-223	ENST00000641597	ZNF491	Q8N8L2	437 aa		13.25	□□□□□ -0.29
PHGDH-223	ENST00000641597	RAX	Q9Y2V3	346 aa		13.25	□□□□□ -0.29
PHGDH-223	ENST00000641597	MUC21	A0A0G2JKD1	596 aa		13.25	□□□□□ -0.29
PHGDH-223	ENST00000641597	MUC21	A0A140T8X8	626 aa		13.25	□□□□□ -0.29
PHGDH-223	ENST00000641597	C2orf70	A6NJV1	201 aa		13.25	□□□□□ -0.29
PHGDH-223	ENST00000641597		A8MWL6	223 aa		13.25	□□□□□ -0.29
PHGDH-223	ENST00000641597	NBR2	O15453	112 aa		13.25	□□□□□ -0.29
PHGDH-223	ENST00000641597	MUC21	Q5SSG8	566 aa		13.25	□□□□□ -0.29
PHGDH-223	ENST00000641597	IGFL4	Q6B9Z1	124 aa		13.25	□□□□□ -0.29
PHGDH-223	ENST00000641597	OTOR	Q9NRC9	128 aa		13.25	□□□□□ -0.29
PHGDH-223	ENST00000641597	CSN3	P07498	182 aa		13.24	□□□□□ -0.29
PHGDH-223	ENST00000641597	FAM120AOS	Q5T036	256 aa		13.24	□□□□□ -0.29
PHGDH-223	ENST00000641597	RASL11A	Q6T310	242 aa		13.24	□□□□□ -0.29
PHGDH-223	ENST00000641597	TRBV19	A0A075B6N1	114 aa		13.24	□□□□□ -0.29
PHGDH-223	ENST00000641597	CRIP1	P50238	77 aa		13.24	□□□□□ -0.29
PHGDH-223	ENST00000641597	KLF5	Q13887	457 aa	Predicted RBP	13.24	□□□□□ -0.29
PHGDH-223	ENST00000641597		Q6ZN92	141 aa		13.24	□□□□□ -0.29
PHGDH-223	ENST00000641597	C8orf49	Q96NF6	230 aa		13.24	□□□□□ -0.29
PHGDH-223	ENST00000641597	DPM3	Q9P2X0	92 aa		13.24	□□□□□ -0.29
PHGDH-223	ENST00000641597		A0A1W2PPR1	153 aa		13.23	□□□□□ -0.29
PHGDH-223	ENST00000641597	NCBP2L	A6PVI3	153 aa	Known RBP	13.23	□□□□□ -0.29
PHGDH-223	ENST00000641597	RPLP1	P05386	114 aa	Known RBP	13.23	□□□□□ -0.29
PHGDH-223	ENST00000641597	SIGLEC15	Q6ZMC9	328 aa		13.23	□□□□□ -0.29
PHGDH-223	ENST00000641597	LY6G5B	Q8NDX9	201 aa		13.23	□□□□□ -0.29
PHGDH-223	ENST00000641597	RNF125	Q96EQ8	232 aa		13.23	□□□□□ -0.29
PHGDH-223	ENST00000641597	SHANK2-AS3	Q9BTD1	123 aa		13.23	□□□□□ -0.29
PHGDH-223	ENST00000641597	LPAR2	Q9HBW0	351 aa		13.23	□□□□□ -0.29
PHGDH-223	ENST00000641597	TMSB15B	A0A087X1C1	80 aa		13.23	□□□□□ -0.29
PHGDH-223	ENST00000641597	NPS	P0C0P6	89 aa		13.23	□□□□□ -0.29
PHGDH-223	ENST00000641597	ARMS2	P0C7Q2	107 aa		13.23	□□□□□ -0.29
PHGDH-223	ENST00000641597	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.23	□□□□□ -0.29
PHGDH-223	ENST00000641597	STPG4	Q8N801	248 aa		13.23	□□□□□ -0.29
PHGDH-223	ENST00000641597	TXN2	Q99757	166 aa		13.23	□□□□□ -0.29
PHGDH-223	ENST00000641597	TMEM208	Q9BTX3	173 aa		13.23	□□□□□ -0.29
PHGDH-223	ENST00000641597		H0Y8G0	127 aa		13.22	□□□□□ -0.29
PHGDH-223	ENST00000641597	FANCD2OS	Q96PS1	177 aa		13.22	□□□□□ -0.29
PHGDH-223	ENST00000641597	CELSR2	Q9HCU4	2923 aa		13.22	□□□□□ -0.29
PHGDH-223	ENST00000641597	HLA-DRB1	P01911	266 aa		13.22	□□□□□ -0.29
PHGDH-223	ENST00000641597	APOH	P02749	345 aa	Predicted RBP	13.22	□□□□□ -0.29
PHGDH-223	ENST00000641597	ATP5L2	Q7Z4Y8	100 aa		13.22	□□□□□ -0.29
PHGDH-223	ENST00000641597	CHRDL1	Q9BU40	450 aa		13.22	□□□□□ -0.29
PHGDH-223	ENST00000641597	IGHV1-24	A0A0C4DH33	117 aa		13.21	□□□□□ -0.29
PHGDH-223	ENST00000641597		F8W735	103 aa	Predicted RBP	13.21	□□□□□ -0.29
PHGDH-223	ENST00000641597		H3BRN7	92 aa		13.21	□□□□□ -0.29
PHGDH-223	ENST00000641597	ZNF492	Q9P255	531 aa		13.21	□□□□□ -0.29

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