RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 OR10G9Q8NGN4 311 aa6.88□□□□□ -1.31
SCARB2-225ENST00000640900 OR10G7Q8NGN6 311 aa6.88□□□□□ -1.31
SCARB2-225ENST00000640900 SUN5Q8TC36 379 aa6.88□□□□□ -1.31
SCARB2-225ENST00000640900 MBD3L1Q8WWY6 194 aa6.88□□□□□ -1.31
SCARB2-225ENST00000640900 ZNF503Q96F45 646 aa6.88□□□□□ -1.31
SCARB2-225ENST00000640900 PBDC1Q9BVG4 233 aa6.88□□□□□ -1.31
SCARB2-225ENST00000640900 RHPN1-AS1Q9BWJ2 59 aa6.88□□□□□ -1.31
SCARB2-225ENST00000640900 SCRT1Q9BWW7 348 aa6.88□□□□□ -1.31
SCARB2-225ENST00000640900 TMEM14CQ9P0S9 112 aa6.88□□□□□ -1.31
SCARB2-225ENST00000640900 MLXQ9UH92 298 aa6.88□□□□□ -1.31
SCARB2-225ENST00000640900 FUT9Q9Y231 359 aa6.88□□□□□ -1.31
SCARB2-225ENST00000640900 NBEAL1Q6ZS30 2694 aa6.88□□□□□ -1.31
SCARB2-225ENST00000640900 TRAV1-1A0A0B4J248 108 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 ZNF207O43670 478 aaKnown RBP6.87□□□□□ -1.31
SCARB2-225ENST00000640900 CD5P06127 495 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 STAG3L2P0CL84 134 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 STAG3L3P0CL85 134 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 IGLC2P0DOY2 106 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 GP9P14770 177 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 S100A7P31151 101 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 INSL3P51460 131 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 RHOBP62745 196 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 FAM78BQ5VT40 261 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 MIR17HGQ75NE6 70 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 SSX7Q7RTT5 188 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 S100A7AQ86SG5 101 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 ZNF680Q8NEM1 530 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 LYPD6BQ8NI32 183 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 RAB24Q969Q5 203 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 GPR82Q96P67 336 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 MCRIP2Q9BUT9 160 aaKnown RBP6.87□□□□□ -1.31
SCARB2-225ENST00000640900 ELOVL1Q9BW60 279 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 SLC25A2Q9BXI2 301 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 DOK5Q9P104 306 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 PFDN2Q9UHV9 154 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 RNF24Q9Y225 148 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 SMAD5-AS1Q9Y6J3 95 aa6.87□□□□□ -1.31
SCARB2-225ENST00000640900 A0A087X0K7 114 aa6.86□□□□□ -1.31
SCARB2-225ENST00000640900 TRAV5A0A0B4J249 113 aa6.86□□□□□ -1.31
SCARB2-225ENST00000640900 TRAV25A0A0B4J276 109 aa6.86□□□□□ -1.31
SCARB2-225ENST00000640900 CTXND1A0A1B0GTU2 59 aa6.86□□□□□ -1.31
SCARB2-225ENST00000640900 RPL7P18124 248 aaKnown RBP6.86□□□□□ -1.31
SCARB2-225ENST00000640900 FHITP49789 147 aa6.86□□□□□ -1.31
SCARB2-225ENST00000640900 AKR1C8PQ5T2L2 129 aa6.86□□□□□ -1.31
SCARB2-225ENST00000640900 OR2K2Q8NGT1 345 aa6.86□□□□□ -1.31
SCARB2-225ENST00000640900 TMEM231Q9H6L2 316 aa6.86□□□□□ -1.31
SCARB2-225ENST00000640900 IGHV3OR16-13A0A075B7E8 117 aa6.85□□□□□ -1.31
SCARB2-225ENST00000640900 IGHV3-49A0A0A0MS15 119 aa6.85□□□□□ -1.31
SCARB2-225ENST00000640900 IGHV3-74A0A0B4J1X5 117 aa6.85□□□□□ -1.31
SCARB2-225ENST00000640900 TRAV2A0A0B4J234 112 aa6.85□□□□□ -1.31
SCARB2-225ENST00000640900 SOCS3O14543 225 aa6.85□□□□□ -1.31
SCARB2-225ENST00000640900 TSPAN4O14817 238 aa6.85□□□□□ -1.31
SCARB2-225ENST00000640900 BMI1P35226 326 aa6.85□□□□□ -1.31
SCARB2-225ENST00000640900 CDC34P49427 236 aaPredicted RBP6.85□□□□□ -1.31
SCARB2-225ENST00000640900 PMS2P11Q13670 270 aa6.85□□□□□ -1.31
SCARB2-225ENST00000640900 FAM74A1Q5RGS3 127 aa6.85□□□□□ -1.31
SCARB2-225ENST00000640900 C9orf66Q5T8R8 295 aa6.85□□□□□ -1.31
SCARB2-225ENST00000640900 LEMD1Q68G75 181 aa6.85□□□□□ -1.31
SCARB2-225ENST00000640900 ALKAL2Q6UX46 152 aa6.85□□□□□ -1.31
SCARB2-225ENST00000640900 PQLC2Q6ZP29 291 aa6.85□□□□□ -1.31
SCARB2-225ENST00000640900 STXBP6Q8NFX7 210 aa6.85□□□□□ -1.31
SCARB2-225ENST00000640900 DCANP1Q8TF63 244 aa6.85□□□□□ -1.31
SCARB2-225ENST00000640900 FXYD5Q96DB9 178 aa6.85□□□□□ -1.31
SCARB2-225ENST00000640900 SAT2Q96F10 170 aaPredicted RBP6.85□□□□□ -1.31
SCARB2-225ENST00000640900 GRAMD2BQ96HH9 432 aa6.85□□□□□ -1.31
SCARB2-225ENST00000640900 ACTR3CQ9C0K3 210 aaPredicted RBP6.85□□□□□ -1.31
SCARB2-225ENST00000640900 HRH4Q9H3N8 390 aa6.85□□□□□ -1.31
SCARB2-225ENST00000640900 IGHV3-66A0A0C4DH42 116 aa6.84□□□□□ -1.31
SCARB2-225ENST00000640900 HELTA6NFD8 242 aa6.84□□□□□ -1.31
SCARB2-225ENST00000640900 ZNF785A8K8V0 405 aa6.84□□□□□ -1.31
SCARB2-225ENST00000640900 H3BQ15 152 aa6.84□□□□□ -1.31
SCARB2-225ENST00000640900 ZNF253O75346 499 aa6.84□□□□□ -1.31
SCARB2-225ENST00000640900 HIST1H1EP10412 219 aaKnown RBP6.84□□□□□ -1.31
SCARB2-225ENST00000640900 TAS2R45P59539 299 aa6.84□□□□□ -1.31
SCARB2-225ENST00000640900 EGFEM1PQ0D2K5 195 aa6.84□□□□□ -1.31
SCARB2-225ENST00000640900 BEAN1Q3B7T3 259 aa6.84□□□□□ -1.31
SCARB2-225ENST00000640900 CD300EQ496F6 205 aaPredicted RBP6.84□□□□□ -1.31
SCARB2-225ENST00000640900 KHDC3LQ587J8 217 aa6.84□□□□□ -1.31
SCARB2-225ENST00000640900 FAM122CQ6P4D5 195 aa6.84□□□□□ -1.31
SCARB2-225ENST00000640900 SIGLEC15Q6ZMC9 328 aa6.84□□□□□ -1.31
SCARB2-225ENST00000640900 TCF24Q7RTU0 167 aa6.84□□□□□ -1.31
SCARB2-225ENST00000640900 BPIFA4PQ86YQ2 179 aa6.84□□□□□ -1.31
SCARB2-225ENST00000640900 TMEM61Q8N0U2 210 aa6.84□□□□□ -1.31
SCARB2-225ENST00000640900 OR8I2Q8N0Y5 310 aa6.84□□□□□ -1.31
SCARB2-225ENST00000640900 RNF141Q8WVD5 230 aa6.84□□□□□ -1.31
SCARB2-225ENST00000640900 NARS2Q96I59 477 aaKnown RBP6.84□□□□□ -1.31
SCARB2-225ENST00000640900 SLC25A22Q9H936 323 aa6.84□□□□□ -1.31
SCARB2-225ENST00000640900 ZNF586Q9NXT0 402 aa6.84□□□□□ -1.31
SCARB2-225ENST00000640900 ZNF256Q9Y2P7 627 aaPredicted RBP6.84□□□□□ -1.31
SCARB2-225ENST00000640900 SORL1Q92673 2214 aa6.84□□□□□ -1.32
SCARB2-225ENST00000640900 NOTCH1P46531 2555 aa6.83□□□□□ -1.32
SCARB2-225ENST00000640900 A0A1W2PPV4 95 aa6.83□□□□□ -1.32
SCARB2-225ENST00000640900 IZUMO1RA6ND01 250 aa6.83□□□□□ -1.32
SCARB2-225ENST00000640900 K7EQG2 157 aa6.83□□□□□ -1.32
SCARB2-225ENST00000640900 RGS13O14921 159 aa6.83□□□□□ -1.32
SCARB2-225ENST00000640900 SAP30O75446 220 aa6.83□□□□□ -1.32
SCARB2-225ENST00000640900 EIF3GO75821 320 aaKnown RBP eCLIP6.83□□□□□ -1.32
SCARB2-225ENST00000640900 NDUFB4O95168 129 aa6.83□□□□□ -1.32
SCARB2-225ENST00000640900 CXorf1O96002 111 aa6.83□□□□□ -1.32
SCARB2-225ENST00000640900 IFNA7P01567 189 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms