RNA–Protein interactions for RNA: ENST00000640646.1

PRICKLE1-218, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 1 (best)

Gene PRICKLE1, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-218ENST00000640646 SIX6O95475 246 aa10.41□□□□□ -0.74
PRICKLE1-218ENST00000640646 NUP62P37198 522 aaPredicted RBP10.41□□□□□ -0.74
PRICKLE1-218ENST00000640646 AP2S1P53680 142 aaPredicted RBP10.41□□□□□ -0.74
PRICKLE1-218ENST00000640646 IL15RAQ13261 267 aa10.41□□□□□ -0.74
PRICKLE1-218ENST00000640646 RAB32Q13637 225 aa10.41□□□□□ -0.74
PRICKLE1-218ENST00000640646 SIGLEC15Q6ZMC9 328 aa10.41□□□□□ -0.74
PRICKLE1-218ENST00000640646 BPIFCQ8NFQ6 507 aa10.41□□□□□ -0.74
PRICKLE1-218ENST00000640646 PPP1R14BQ96C90 147 aa10.41□□□□□ -0.74
PRICKLE1-218ENST00000640646 C11orf1Q9H5F2 150 aa10.41□□□□□ -0.74
PRICKLE1-218ENST00000640646 MGAT4CQ9UBM8 478 aa10.41□□□□□ -0.74
PRICKLE1-218ENST00000640646 ABCA13Q86UQ4 5058 aa10.41□□□□□ -0.74
PRICKLE1-218ENST00000640646 A0A1B0GVY2 172 aa10.4□□□□□ -0.74
PRICKLE1-218ENST00000640646 FAM24AA6NFZ4 105 aa10.4□□□□□ -0.74
PRICKLE1-218ENST00000640646 CFDP00746 253 aaPredicted RBP10.4□□□□□ -0.74
PRICKLE1-218ENST00000640646 AMBPP02760 352 aa10.4□□□□□ -0.74
PRICKLE1-218ENST00000640646 ORM2P19652 201 aa10.4□□□□□ -0.74
PRICKLE1-218ENST00000640646 PVALBP20472 110 aaPredicted RBP10.4□□□□□ -0.74
PRICKLE1-218ENST00000640646 CAV2P51636 162 aa10.4□□□□□ -0.74
PRICKLE1-218ENST00000640646 C12orf74Q32Q52 190 aa10.4□□□□□ -0.74
PRICKLE1-218ENST00000640646 CYP2G1PQ6ZSU1 146 aa10.4□□□□□ -0.74
PRICKLE1-218ENST00000640646 RNF126Q9BV68 326 aa10.4□□□□□ -0.74
PRICKLE1-218ENST00000640646 NPVFQ9HCQ7 196 aa10.4□□□□□ -0.74
PRICKLE1-218ENST00000640646 FNDC10F2Z333 226 aa10.39□□□□□ -0.75
PRICKLE1-218ENST00000640646 PSMG4Q5JS54 123 aa10.39□□□□□ -0.75
PRICKLE1-218ENST00000640646 OR1B1Q8NGR6 318 aa10.39□□□□□ -0.75
PRICKLE1-218ENST00000640646 SCRT1Q9BWW7 348 aa10.39□□□□□ -0.75
PRICKLE1-218ENST00000640646 SEPSECSQ9HD40 501 aaKnown RBP10.39□□□□□ -0.75
PRICKLE1-218ENST00000640646 H3BMM0 161 aa10.38□□□□□ -0.75
PRICKLE1-218ENST00000640646 CST7O76096 145 aa10.38□□□□□ -0.75
PRICKLE1-218ENST00000640646 SLC38A11Q08AI6 406 aa10.38□□□□□ -0.75
PRICKLE1-218ENST00000640646 C1orf194Q5T5A4 169 aa10.38□□□□□ -0.75
PRICKLE1-218ENST00000640646 TMEM147Q9BVK8 224 aa10.38□□□□□ -0.75
PRICKLE1-218ENST00000640646 GGACTQ9BVM4 153 aa10.38□□□□□ -0.75
PRICKLE1-218ENST00000640646 NRN1Q9NPD7 142 aa10.38□□□□□ -0.75
PRICKLE1-218ENST00000640646 DOK5Q9P104 306 aa10.38□□□□□ -0.75
PRICKLE1-218ENST00000640646 SSNA1O43805 119 aa10.37□□□□□ -0.75
PRICKLE1-218ENST00000640646 TEPPQ6URK8 271 aa10.37□□□□□ -0.75
PRICKLE1-218ENST00000640646 ZNF705AQ6ZN79 300 aaPredicted RBP10.37□□□□□ -0.75
PRICKLE1-218ENST00000640646 ZNF767PQ75MW2 155 aa10.37□□□□□ -0.75
PRICKLE1-218ENST00000640646 OR8I2Q8N0Y5 310 aa10.37□□□□□ -0.75
PRICKLE1-218ENST00000640646 SLC25A22Q9H936 323 aa10.37□□□□□ -0.75
PRICKLE1-218ENST00000640646 LYRM2Q9NU23 88 aaPredicted RBP10.37□□□□□ -0.75
PRICKLE1-218ENST00000640646 SLC45A2Q9UMX9 530 aa10.37□□□□□ -0.75
PRICKLE1-218ENST00000640646 IGSF23A1L1A6 192 aa10.36□□□□□ -0.75
PRICKLE1-218ENST00000640646 ZNF98A6NK75 572 aa10.36□□□□□ -0.75
PRICKLE1-218ENST00000640646 LINC00869P0C866 280 aa10.36□□□□□ -0.75
PRICKLE1-218ENST00000640646 HLA-DRB4P13762 266 aa10.36□□□□□ -0.75
PRICKLE1-218ENST00000640646 SELENOTP62341 195 aa10.36□□□□□ -0.75
PRICKLE1-218ENST00000640646 LRRC37A5PQ49AS3 106 aa10.36□□□□□ -0.75
PRICKLE1-218ENST00000640646 LINC00336Q6ZUF6 198 aa10.36□□□□□ -0.75
PRICKLE1-218ENST00000640646 TMEM252Q8N6L7 170 aa10.36□□□□□ -0.75
PRICKLE1-218ENST00000640646 NMES1Q9C002 83 aa10.36□□□□□ -0.75
PRICKLE1-218ENST00000640646 HLA-DRB4X5D2U9 266 aa10.36□□□□□ -0.75
PRICKLE1-218ENST00000640646 DEFB131BA0A096LNP1 70 aa10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 ZNF705FA8MVS1 300 aaPredicted RBP10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 HYPMO75409 117 aa10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 RLN2P04090 185 aa10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 OR5G3P0C626 314 aa10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 ZNF705DP0CH99 300 aaPredicted RBP10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 ZNF705BP0CI00 300 aaPredicted RBP10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 SULT1A1P50225 295 aa10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 RAP2BP61225 183 aa10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 SNRPD3P62318 126 aaKnown RBP10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 CYCSP99999 105 aaKnown RBP10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 GDF5OSQ5U4N7 250 aa10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 STX12Q86Y82 276 aa10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 NEU1Q99519 415 aa10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 C1QTNF4Q9BXJ3 329 aa10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 SLC25A32Q9H2D1 315 aa10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 UQCC1Q9NVA1 299 aa10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 XCL2Q9UBD3 114 aa10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 HIGD1AQ9Y241 93 aa10.35□□□□□ -0.75
PRICKLE1-218ENST00000640646 H0YIZ8 118 aa10.34□□□□□ -0.75
PRICKLE1-218ENST00000640646 SOCS3O14543 225 aa10.34□□□□□ -0.75
PRICKLE1-218ENST00000640646 AGPAT2O15120 278 aa10.34□□□□□ -0.75
PRICKLE1-218ENST00000640646 RTL8CO15255 209 aa10.34□□□□□ -0.75
PRICKLE1-218ENST00000640646 PTTG1O95997 202 aa10.34□□□□□ -0.75
PRICKLE1-218ENST00000640646 S100A7P31151 101 aa10.34□□□□□ -0.75
PRICKLE1-218ENST00000640646 S100A11P31949 105 aa10.34□□□□□ -0.75
PRICKLE1-218ENST00000640646 GALR1P47211 349 aa10.34□□□□□ -0.75
PRICKLE1-218ENST00000640646 H2BFSP57053 126 aa10.34□□□□□ -0.75
PRICKLE1-218ENST00000640646 DEFB1P60022 68 aa10.34□□□□□ -0.75
PRICKLE1-218ENST00000640646 PLP1P60201 277 aa10.34□□□□□ -0.75
PRICKLE1-218ENST00000640646 ZNF546Q86UE3 836 aa10.34□□□□□ -0.75
PRICKLE1-218ENST00000640646 POM121L12Q8N7R1 296 aa10.34□□□□□ -0.75
PRICKLE1-218ENST00000640646 MGST2Q99735 147 aa10.34□□□□□ -0.75
PRICKLE1-218ENST00000640646 SLC25A39Q9BZJ4 359 aaPredicted RBP10.34□□□□□ -0.75
PRICKLE1-218ENST00000640646 ARL6Q9H0F7 186 aa10.34□□□□□ -0.75
PRICKLE1-218ENST00000640646 OR5AC2Q9NZP5 309 aa10.34□□□□□ -0.75
PRICKLE1-218ENST00000640646 E5RGE8 158 aa10.33□□□□□ -0.76
PRICKLE1-218ENST00000640646 H3BRN7 92 aa10.33□□□□□ -0.76
PRICKLE1-218ENST00000640646 NUTF2P61970 127 aaKnown RBP10.33□□□□□ -0.76
PRICKLE1-218ENST00000640646 HBG1P69891 147 aa10.33□□□□□ -0.76
PRICKLE1-218ENST00000640646 HBG2P69892 147 aa10.33□□□□□ -0.76
PRICKLE1-218ENST00000640646 ZNF709Q8N972 641 aa10.33□□□□□ -0.76
PRICKLE1-218ENST00000640646 LINC00052Q96N35 136 aa10.33□□□□□ -0.76
PRICKLE1-218ENST00000640646 UHRF2Q96PU4 802 aa10.33□□□□□ -0.76
PRICKLE1-218ENST00000640646 SHANK2-AS3Q9BTD1 123 aa10.33□□□□□ -0.76
PRICKLE1-218ENST00000640646 RSG1Q9BU20 258 aa10.33□□□□□ -0.76
PRICKLE1-218ENST00000640646 ALG5Q9Y673 324 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms