RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 K7EQG2 157 aa9.84□□□□□ -0.83
GTF3A-209ENST00000640289 FFAR4Q5NUL3 377 aa9.84□□□□□ -0.83
GTF3A-209ENST00000640289 KCNRGQ8N5I3 272 aa9.84□□□□□ -0.83
GTF3A-209ENST00000640289 C17orf77Q96MU5 243 aa9.84□□□□□ -0.83
GTF3A-209ENST00000640289 PFDN5Q99471 154 aa9.84□□□□□ -0.83
GTF3A-209ENST00000640289 NRN1Q9NPD7 142 aa9.84□□□□□ -0.83
GTF3A-209ENST00000640289 KCNIP2Q9NS61 270 aa9.84□□□□□ -0.83
GTF3A-209ENST00000640289 NOTCH1P46531 2555 aa9.83□□□□□ -0.84
GTF3A-209ENST00000640289 TRAV2A0A0B4J234 112 aa9.83□□□□□ -0.84
GTF3A-209ENST00000640289 OR11H12B2RN74 326 aa9.83□□□□□ -0.84
GTF3A-209ENST00000640289 IGHV4-30-4P0DP06 118 aa9.83□□□□□ -0.84
GTF3A-209ENST00000640289 ATP6V0CP27449 155 aa9.83□□□□□ -0.84
GTF3A-209ENST00000640289 S100A7P31151 101 aa9.83□□□□□ -0.84
GTF3A-209ENST00000640289 GALR1P47211 349 aa9.83□□□□□ -0.84
GTF3A-209ENST00000640289 ZNF345Q14585 488 aa9.83□□□□□ -0.84
GTF3A-209ENST00000640289 ZNF124Q15973 351 aa9.83□□□□□ -0.84
GTF3A-209ENST00000640289 SPATA31B1PQ5VZV4 182 aa9.83□□□□□ -0.84
GTF3A-209ENST00000640289 GATAD1Q8WUU5 269 aa9.83□□□□□ -0.84
GTF3A-209ENST00000640289 CITED4Q96RK1 184 aa9.83□□□□□ -0.84
GTF3A-209ENST00000640289 SEPSECSQ9HD40 501 aaKnown RBP9.83□□□□□ -0.84
GTF3A-209ENST00000640289 CYTL1Q9NRR1 136 aa9.83□□□□□ -0.84
GTF3A-209ENST00000640289 BORCS7-ASMTA0A0B4J1R7 106 aa9.82□□□□□ -0.84
GTF3A-209ENST00000640289 MRPS12O15235 138 aaKnown RBP9.82□□□□□ -0.84
GTF3A-209ENST00000640289 C1QBP02746 253 aa9.82□□□□□ -0.84
GTF3A-209ENST00000640289 SNRPCP09234 159 aaKnown RBP9.82□□□□□ -0.84
GTF3A-209ENST00000640289 FAM78BQ5VT40 261 aa9.82□□□□□ -0.84
GTF3A-209ENST00000640289 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.82□□□□□ -0.84
GTF3A-209ENST00000640289 S100A7AQ86SG5 101 aa9.82□□□□□ -0.84
GTF3A-209ENST00000640289 APRG1Q8IVJ8 170 aa9.82□□□□□ -0.84
GTF3A-209ENST00000640289 GPR82Q96P67 336 aa9.82□□□□□ -0.84
GTF3A-209ENST00000640289 ARPC5LQ9BPX5 153 aa9.82□□□□□ -0.84
GTF3A-209ENST00000640289 SH3BGRL3Q9H299 93 aa9.82□□□□□ -0.84
GTF3A-209ENST00000640289 MAP6D1Q9H9H5 199 aa9.82□□□□□ -0.84
GTF3A-209ENST00000640289 TIMM9Q9Y5J7 89 aa9.82□□□□□ -0.84
GTF3A-209ENST00000640289 A0A0D9SG52 128 aa9.81□□□□□ -0.84
GTF3A-209ENST00000640289 TAAR5O14804 337 aa9.81□□□□□ -0.84
GTF3A-209ENST00000640289 ZNF688P0C7X2 276 aa9.81□□□□□ -0.84
GTF3A-209ENST00000640289 RPL7P18124 248 aaKnown RBP9.81□□□□□ -0.84
GTF3A-209ENST00000640289 DEFB131AP59861 70 aa9.81□□□□□ -0.84
GTF3A-209ENST00000640289 MIR17HGQ75NE6 70 aa9.81□□□□□ -0.84
GTF3A-209ENST00000640289 SRD5A3Q9H8P0 318 aa9.81□□□□□ -0.84
GTF3A-209ENST00000640289 H3BTX0 84 aa9.8□□□□□ -0.84
GTF3A-209ENST00000640289 SOCS3O14543 225 aa9.8□□□□□ -0.84
GTF3A-209ENST00000640289 BCL2L11O43521 198 aa9.8□□□□□ -0.84
GTF3A-209ENST00000640289 EIF3GO75821 320 aaKnown RBP eCLIP9.8□□□□□ -0.84
GTF3A-209ENST00000640289 JTBO76095 146 aa9.8□□□□□ -0.84
GTF3A-209ENST00000640289 FRMD6-AS1P0C7T7 363 aa9.8□□□□□ -0.84
GTF3A-209ENST00000640289 ATF4P18848 351 aaPredicted RBP9.8□□□□□ -0.84
GTF3A-209ENST00000640289 RAB2AP61019 212 aa9.8□□□□□ -0.84
GTF3A-209ENST00000640289 LGALSLQ3ZCW2 172 aaPredicted RBP9.8□□□□□ -0.84
GTF3A-209ENST00000640289 TMUB2Q71RG4 321 aa9.8□□□□□ -0.84
GTF3A-209ENST00000640289 BPIFA4PQ86YQ2 179 aa9.8□□□□□ -0.84
GTF3A-209ENST00000640289 PSMG3Q9BT73 122 aaPredicted RBP9.8□□□□□ -0.84
GTF3A-209ENST00000640289 SLC25A2Q9BXI2 301 aa9.8□□□□□ -0.84
GTF3A-209ENST00000640289 TUBA4BQ9H853 241 aa9.8□□□□□ -0.84
GTF3A-209ENST00000640289 FUT9Q9Y231 359 aa9.8□□□□□ -0.84
GTF3A-209ENST00000640289 MEGF8Q7Z7M0 2845 aa9.8□□□□□ -0.84
GTF3A-209ENST00000640289 KANTRA0A1W2PQU2 76 aa9.79□□□□□ -0.84
GTF3A-209ENST00000640289 A8MZ25 164 aa9.79□□□□□ -0.84
GTF3A-209ENST00000640289 M6PRP20645 277 aa9.79□□□□□ -0.84
GTF3A-209ENST00000640289 ACOT6Q3I5F7 207 aaPredicted RBP9.79□□□□□ -0.84
GTF3A-209ENST00000640289 PSMG4Q5JS54 123 aa9.79□□□□□ -0.84
GTF3A-209ENST00000640289 IGFL4Q6B9Z1 124 aa9.79□□□□□ -0.84
GTF3A-209ENST00000640289 OR2G3Q8NGZ4 309 aa9.79□□□□□ -0.84
GTF3A-209ENST00000640289 FAM167A-AS1Q96KT0 104 aa9.79□□□□□ -0.84
GTF3A-209ENST00000640289 HYLS1Q96M11 299 aa9.79□□□□□ -0.84
GTF3A-209ENST00000640289 FAM110AQ9BQ89 295 aa9.79□□□□□ -0.84
GTF3A-209ENST00000640289 ZNF471Q9BX82 626 aaPredicted RBP9.79□□□□□ -0.84
GTF3A-209ENST00000640289 MRPL32Q9BYC8 188 aaKnown RBP9.79□□□□□ -0.84
GTF3A-209ENST00000640289 RNF24Q9Y225 148 aa9.79□□□□□ -0.84
GTF3A-209ENST00000640289 SORL1Q92673 2214 aa9.78□□□□□ -0.84
GTF3A-209ENST00000640289 A0A087X0K7 114 aa9.78□□□□□ -0.84
GTF3A-209ENST00000640289 RBMY1BA6NDE4 496 aaKnown RBP9.78□□□□□ -0.84
GTF3A-209ENST00000640289 RBMY1EA6NEQ0 496 aaKnown RBP9.78□□□□□ -0.84
GTF3A-209ENST00000640289 H3BQ15 152 aa9.78□□□□□ -0.84
GTF3A-209ENST00000640289 PFDN1O60925 122 aa9.78□□□□□ -0.84
GTF3A-209ENST00000640289 RBMY1DP0C7P1 496 aaKnown RBP9.78□□□□□ -0.84
GTF3A-209ENST00000640289 IGLC2P0DOY2 106 aa9.78□□□□□ -0.84
GTF3A-209ENST00000640289 PYYP10082 97 aa9.78□□□□□ -0.84
GTF3A-209ENST00000640289 MEOX2P50222 304 aa9.78□□□□□ -0.84
GTF3A-209ENST00000640289 CMC4P56277 68 aaPredicted RBP9.78□□□□□ -0.84
GTF3A-209ENST00000640289 DEFB1P60022 68 aa9.78□□□□□ -0.84
GTF3A-209ENST00000640289 FAM122CQ6P4D5 195 aa9.78□□□□□ -0.84
GTF3A-209ENST00000640289 OR10G4Q8NGN3 311 aa9.78□□□□□ -0.84
GTF3A-209ENST00000640289 OR10G9Q8NGN4 311 aa9.78□□□□□ -0.84
GTF3A-209ENST00000640289 OR10G7Q8NGN6 311 aa9.78□□□□□ -0.84
GTF3A-209ENST00000640289 GNPNAT1Q96EK6 184 aaPredicted RBP9.78□□□□□ -0.84
GTF3A-209ENST00000640289 C16orf92Q96LL3 132 aa9.78□□□□□ -0.84
GTF3A-209ENST00000640289 C20orf173Q96LM9 149 aa9.78□□□□□ -0.84
GTF3A-209ENST00000640289 TRAV8-2A0A0B4J237 113 aa9.77□□□□□ -0.85
GTF3A-209ENST00000640289 KNCNA6PVL3 124 aa9.77□□□□□ -0.85
GTF3A-209ENST00000640289 SLC17A3O00476 420 aa9.77□□□□□ -0.85
GTF3A-209ENST00000640289 HLA-DMBP28068 263 aa9.77□□□□□ -0.85
GTF3A-209ENST00000640289 ID1P41134 155 aa9.77□□□□□ -0.85
GTF3A-209ENST00000640289 PSMB3P49720 205 aa9.77□□□□□ -0.85
GTF3A-209ENST00000640289 SNRPD3P62318 126 aaKnown RBP9.77□□□□□ -0.85
GTF3A-209ENST00000640289 RHOBP62745 196 aa9.77□□□□□ -0.85
GTF3A-209ENST00000640289 SERF2P84101 59 aa9.77□□□□□ -0.85
GTF3A-209ENST00000640289 ZFP69Q49AA0 526 aa9.77□□□□□ -0.85
GTF3A-209ENST00000640289 LINC00322Q6ZN03 302 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms