RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 SLC25A17O43808 307 aa16.34■□□□□ 0.21
PMS1-222ENST00000639501 MRGPRG-AS1Q2M3A8 158 aa16.34■□□□□ 0.21
PMS1-222ENST00000639501 FCN3O75636 299 aa16.33■□□□□ 0.2
PMS1-222ENST00000639501 FXYD7P58549 80 aa16.33■□□□□ 0.2
PMS1-222ENST00000639501 A0A1B0GUT8 65 aa16.33■□□□□ 0.2
PMS1-222ENST00000639501 IFI27P40305 119 aaPredicted RBP16.33■□□□□ 0.2
PMS1-222ENST00000639501 SUB1P53999 127 aaKnown RBP eCLIP16.33■□□□□ 0.2
PMS1-222ENST00000639501 SRSF12Q8WXF0 261 aaKnown RBP16.33■□□□□ 0.2
PMS1-222ENST00000639501 KALRNO60229 2985 aa16.32■□□□□ 0.2
PMS1-222ENST00000639501 G3V4G9 280 aa16.32■□□□□ 0.2
PMS1-222ENST00000639501 GATA4P43694 442 aa16.32■□□□□ 0.2
PMS1-222ENST00000639501 KIR3DS1Q14943 382 aa16.32■□□□□ 0.2
PMS1-222ENST00000639501 OR4C13Q8NGP0 309 aa16.32■□□□□ 0.2
PMS1-222ENST00000639501 OR10AG1Q8NH19 301 aa16.32■□□□□ 0.2
PMS1-222ENST00000639501 H3BRM9 83 aa16.32■□□□□ 0.2
PMS1-222ENST00000639501 K7EP34 96 aa16.32■□□□□ 0.2
PMS1-222ENST00000639501 IGHV1-46P01743 117 aa16.32■□□□□ 0.2
PMS1-222ENST00000639501 CRYGCP07315 174 aa16.32■□□□□ 0.2
PMS1-222ENST00000639501 TNFAIP6P98066 277 aaPredicted RBP16.32■□□□□ 0.2
PMS1-222ENST00000639501 FA2HQ7L5A8 372 aa16.32■□□□□ 0.2
PMS1-222ENST00000639501 PRSS3P2Q8NHM4 247 aa16.32■□□□□ 0.2
PMS1-222ENST00000639501 RAB37Q96AX2 223 aa16.32■□□□□ 0.2
PMS1-222ENST00000639501 AKAP13Q12802 2813 aa16.31■□□□□ 0.2
PMS1-222ENST00000639501 NHLH1Q02575 133 aa16.31■□□□□ 0.2
PMS1-222ENST00000639501 LINC00312Q9Y6C7 94 aa16.31■□□□□ 0.2
PMS1-222ENST00000639501 DMXL2Q8TDJ6 3036 aa16.31■□□□□ 0.2
PMS1-222ENST00000639501 PAX2Q02962 417 aa16.3■□□□□ 0.2
PMS1-222ENST00000639501 GTF2H5Q6ZYL4 71 aa16.3■□□□□ 0.2
PMS1-222ENST00000639501 TRGV9Q99603 122 aa16.3■□□□□ 0.2
PMS1-222ENST00000639501 TPPP3Q9BW30 176 aa16.3■□□□□ 0.2
PMS1-222ENST00000639501 PROCRQ9UNN8 238 aa16.3■□□□□ 0.2
PMS1-222ENST00000639501 LOC389332A0A1B0GUA5 103 aa16.3■□□□□ 0.2
PMS1-222ENST00000639501 CSN1S1P47710 185 aa16.3■□□□□ 0.2
PMS1-222ENST00000639501 THYN1Q9P016 225 aa16.3■□□□□ 0.2
PMS1-222ENST00000639501 IGLV3-9A0A075B6K5 115 aa16.29■□□□□ 0.2
PMS1-222ENST00000639501 GLRXP35754 106 aa16.29■□□□□ 0.2
PMS1-222ENST00000639501 PRSS57Q6UWY2 283 aa16.29■□□□□ 0.2
PMS1-222ENST00000639501 AP1S3Q96PC3 154 aa16.29■□□□□ 0.2
PMS1-222ENST00000639501 A0A0G2JLM5 398 aa16.29■□□□□ 0.2
PMS1-222ENST00000639501 BOD1L2Q8IYS8 172 aa16.29■□□□□ 0.2
PMS1-222ENST00000639501 IGHV3-72A0A0B4J1Y9 119 aa16.28■□□□□ 0.2
PMS1-222ENST00000639501 HOXB4P17483 251 aaPredicted RBP16.28■□□□□ 0.2
PMS1-222ENST00000639501 CACNG7P62955 275 aa16.28■□□□□ 0.2
PMS1-222ENST00000639501 VSTM2AQ8TAG5 236 aa16.28■□□□□ 0.2
PMS1-222ENST00000639501 SEM1Q6ZVN7 128 aa16.28■□□□□ 0.2
PMS1-222ENST00000639501 OR10X1Q8NGY0 326 aa16.28■□□□□ 0.2
PMS1-222ENST00000639501 OR4A5Q8NH83 315 aa16.28■□□□□ 0.2
PMS1-222ENST00000639501 OTORQ9NRC9 128 aa16.28■□□□□ 0.2
PMS1-222ENST00000639501 ZZEF1O43149 2961 aa16.28■□□□□ 0.2
PMS1-222ENST00000639501 A6NDN8 102 aa16.27■□□□□ 0.2
PMS1-222ENST00000639501 APOBEC3AP31941 199 aaPredicted RBP16.27■□□□□ 0.2
PMS1-222ENST00000639501 LYZP61626 148 aa16.27■□□□□ 0.2
PMS1-222ENST00000639501 ADAMTSL5Q6ZMM2 481 aa16.27■□□□□ 0.2
PMS1-222ENST00000639501 NEGR1Q7Z3B1 354 aa16.27■□□□□ 0.2
PMS1-222ENST00000639501 OR2K2Q8NGT1 345 aa16.27■□□□□ 0.2
PMS1-222ENST00000639501 C8orf46Q8TAG6 207 aa16.27■□□□□ 0.2
PMS1-222ENST00000639501 C17orf77Q96MU5 243 aa16.27■□□□□ 0.2
PMS1-222ENST00000639501 SRSF6Q13247 344 aaKnown RBP16.27■□□□□ 0.2
PMS1-222ENST00000639501 TMEM30BQ3MIR4 351 aa16.27■□□□□ 0.2
PMS1-222ENST00000639501 SIGLEC8Q9NYZ4 499 aa16.27■□□□□ 0.2
PMS1-222ENST00000639501 INSIG2Q9Y5U4 225 aa16.27■□□□□ 0.2
PMS1-222ENST00000639501 SMAD7O15105 426 aaKnown RBP16.26■□□□□ 0.19
PMS1-222ENST00000639501 CRIP1P50238 77 aa16.26■□□□□ 0.19
PMS1-222ENST00000639501 RIGQ13278 110 aa16.26■□□□□ 0.19
PMS1-222ENST00000639501 PCP2Q8IVA1 136 aa16.26■□□□□ 0.19
PMS1-222ENST00000639501 ZADH2Q8N4Q0 377 aa16.26■□□□□ 0.19
PMS1-222ENST00000639501 GATD1Q8NB37 220 aa16.26■□□□□ 0.19
PMS1-222ENST00000639501 D6R8Y8 96 aa16.26■□□□□ 0.19
PMS1-222ENST00000639501 TM4SF20Q53R12 229 aa16.26■□□□□ 0.19
PMS1-222ENST00000639501 FAM169BQ8N8A8 192 aa16.26■□□□□ 0.19
PMS1-222ENST00000639501 TNFRSF1AP19438 455 aa16.25■□□□□ 0.19
PMS1-222ENST00000639501 TMEM200BQ69YZ2 307 aa16.25■□□□□ 0.19
PMS1-222ENST00000639501 RPRMLQ8N4K4 120 aa16.25■□□□□ 0.19
PMS1-222ENST00000639501 HIGD1AQ9Y241 93 aa16.25■□□□□ 0.19
PMS1-222ENST00000639501 CNTFRP26992 372 aa16.25■□□□□ 0.19
PMS1-222ENST00000639501 HSD52Q0P140 79 aa16.25■□□□□ 0.19
PMS1-222ENST00000639501 C22orf34Q6ZV56 151 aa16.25■□□□□ 0.19
PMS1-222ENST00000639501 FDCSPQ8NFU4 85 aa16.25■□□□□ 0.19
PMS1-222ENST00000639501 OR1N2Q8NGR9 330 aa16.25■□□□□ 0.19
PMS1-222ENST00000639501 DPF1Q92782 380 aa16.25■□□□□ 0.19
PMS1-222ENST00000639501 A1L4Q6 167 aa16.24■□□□□ 0.19
PMS1-222ENST00000639501 CCL8P80075 99 aa16.24■□□□□ 0.19
PMS1-222ENST00000639501 ZNF474Q6S9Z5 364 aaPredicted RBP16.24■□□□□ 0.19
PMS1-222ENST00000639501 ABHD17AQ96GS6 310 aa16.24■□□□□ 0.19
PMS1-222ENST00000639501 SLC25A39Q9BZJ4 359 aaPredicted RBP16.24■□□□□ 0.19
PMS1-222ENST00000639501 SPTBN4Q9H254 2564 aa16.24■□□□□ 0.19
PMS1-222ENST00000639501 CEP295Q9C0D2 2601 aa16.24■□□□□ 0.19
PMS1-222ENST00000639501 TMEM213A2RRL7 107 aa16.24■□□□□ 0.19
PMS1-222ENST00000639501 CCL11P51671 97 aa16.24■□□□□ 0.19
PMS1-222ENST00000639501 TEX36Q5VZQ5 186 aa16.24■□□□□ 0.19
PMS1-222ENST00000639501 F11RQ9Y624 299 aaKnown RBP16.24■□□□□ 0.19
PMS1-222ENST00000639501 PLP1P60201 277 aa16.23■□□□□ 0.19
PMS1-222ENST00000639501 LGALS9BQ3B8N2 356 aa16.23■□□□□ 0.19
PMS1-222ENST00000639501 LGALS9CQ6DKI2 356 aa16.23■□□□□ 0.19
PMS1-222ENST00000639501 PVRIGQ6DKI7 326 aa16.23■□□□□ 0.19
PMS1-222ENST00000639501 NPFFR1Q9GZQ6 430 aa16.23■□□□□ 0.19
PMS1-222ENST00000639501 SPCS1Q9Y6A9 102 aa16.23■□□□□ 0.19
PMS1-222ENST00000639501 ROS1P08922 2347 aa16.23■□□□□ 0.19
PMS1-222ENST00000639501 A0A1W2PPM0 123 aa16.23■□□□□ 0.19
PMS1-222ENST00000639501 AMN1Q8IY45 258 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms