RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 SFTPCP11686 197 aa13.49□□□□□ -0.25
SCARB2-210ENST00000638567 LGALS3P17931 250 aaKnown RBP13.49□□□□□ -0.25
SCARB2-210ENST00000638567 KLRD1Q13241 179 aa13.49□□□□□ -0.25
SCARB2-210ENST00000638567 V9GYV3 84 aa13.49□□□□□ -0.25
SCARB2-210ENST00000638567 SYS1-DBNDD2H3BUS1 97 aa13.49□□□□□ -0.25
SCARB2-210ENST00000638567 LYZL1Q6UWQ5 148 aa13.49□□□□□ -0.25
SCARB2-210ENST00000638567 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-210ENST00000638567 PDLIM4P50479 330 aa13.49□□□□□ -0.25
SCARB2-210ENST00000638567 NUP37Q8NFH4 326 aa13.49□□□□□ -0.25
SCARB2-210ENST00000638567 VKORC1Q9BQB6 163 aa13.49□□□□□ -0.25
SCARB2-210ENST00000638567 Q8TAT8 98 aa13.48□□□□□ -0.25
SCARB2-210ENST00000638567 PIMREGQ9BSJ6 248 aa13.48□□□□□ -0.25
SCARB2-210ENST00000638567 C2orf16Q68DN1 1984 aa13.48□□□□□ -0.25
SCARB2-210ENST00000638567 PPBPP02775 128 aa13.48□□□□□ -0.25
SCARB2-210ENST00000638567 SLC50A1Q9BRV3 221 aa13.48□□□□□ -0.25
SCARB2-210ENST00000638567 NDUFA4L2Q9NRX3 87 aa13.48□□□□□ -0.25
SCARB2-210ENST00000638567 NHP2Q9NX24 153 aaKnown RBP13.48□□□□□ -0.25
SCARB2-210ENST00000638567 NAA38Q9BRA0 125 aaKnown RBP13.48□□□□□ -0.25
SCARB2-210ENST00000638567 LY6HO94772 140 aa13.48□□□□□ -0.25
SCARB2-210ENST00000638567 TOMM40O96008 361 aa13.48□□□□□ -0.25
SCARB2-210ENST00000638567 AMMECR1LQ6DCA0 310 aa13.48□□□□□ -0.25
SCARB2-210ENST00000638567 C5orf30Q96GV9 206 aa13.48□□□□□ -0.25
SCARB2-210ENST00000638567 NXT2Q9NPJ8 142 aaKnown RBP13.48□□□□□ -0.25
SCARB2-210ENST00000638567 ASPHD1Q5U4P2 390 aa13.47□□□□□ -0.25
SCARB2-210ENST00000638567 GLMPQ8WWB7 406 aa13.47□□□□□ -0.25
SCARB2-210ENST00000638567 LINC00527Q9UJ94 153 aa13.47□□□□□ -0.25
SCARB2-210ENST00000638567 BUB1B-PAK6H3BSN5 160 aa13.47□□□□□ -0.25
SCARB2-210ENST00000638567 CENPVQ7Z7K6 275 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-210ENST00000638567 ORAOV1Q8WV07 137 aa13.47□□□□□ -0.25
SCARB2-210ENST00000638567 A0A087X0K7 114 aa13.47□□□□□ -0.25
SCARB2-210ENST00000638567 NPIPB6E9PJ23 425 aa13.47□□□□□ -0.25
SCARB2-210ENST00000638567 MS4A6AQ9H2W1 248 aa13.47□□□□□ -0.25
SCARB2-210ENST00000638567 TPTE2P1Q5T6R2 138 aa13.46□□□□□ -0.25
SCARB2-210ENST00000638567 SMIM12Q96EX1 92 aa13.46□□□□□ -0.25
SCARB2-210ENST00000638567 MRPL16Q9NX20 251 aaKnown RBP13.46□□□□□ -0.25
SCARB2-210ENST00000638567 CACNA1AO00555 2505 aa13.46□□□□□ -0.25
SCARB2-210ENST00000638567 KRTAP27-1Q3LI81 207 aa13.46□□□□□ -0.25
SCARB2-210ENST00000638567 PSMG4Q5JS54 123 aa13.46□□□□□ -0.25
SCARB2-210ENST00000638567 WT1-ASQ06250 92 aa13.46□□□□□ -0.25
SCARB2-210ENST00000638567 SLAQ13239 276 aa13.46□□□□□ -0.25
SCARB2-210ENST00000638567 IGFL4Q6B9Z1 124 aa13.46□□□□□ -0.25
SCARB2-210ENST00000638567 C11orf53Q8IXP5 236 aa13.46□□□□□ -0.25
SCARB2-210ENST00000638567 FAM208BQ5VWN6 2430 aa13.46□□□□□ -0.26
SCARB2-210ENST00000638567 C15orf32Q32M92 178 aa13.46□□□□□ -0.26
SCARB2-210ENST00000638567 IGHV3OR16-12A0A075B7B8 117 aa13.45□□□□□ -0.26
SCARB2-210ENST00000638567 SRRM4A7MD48 611 aaKnown RBP13.45□□□□□ -0.26
SCARB2-210ENST00000638567 IGLV1-44P01699 117 aa13.45□□□□□ -0.26
SCARB2-210ENST00000638567 Q86TA4 180 aa13.45□□□□□ -0.26
SCARB2-210ENST00000638567 SPACA3Q8IXA5 215 aa13.45□□□□□ -0.26
SCARB2-210ENST00000638567 OR4X2Q8NGF9 303 aa13.45□□□□□ -0.26
SCARB2-210ENST00000638567 THBDP07204 575 aa13.45□□□□□ -0.26
SCARB2-210ENST00000638567 GATA4P43694 442 aa13.45□□□□□ -0.26
SCARB2-210ENST00000638567 C5orf64Q2M2E5 130 aa13.45□□□□□ -0.26
SCARB2-210ENST00000638567 DDB2Q92466 427 aa13.45□□□□□ -0.26
SCARB2-210ENST00000638567 C11orf52Q96A22 123 aa13.45□□□□□ -0.26
SCARB2-210ENST00000638567 C19orf67A6NJJ6 358 aa13.45□□□□□ -0.26
SCARB2-210ENST00000638567 CEACAM4O75871 244 aa13.45□□□□□ -0.26
SCARB2-210ENST00000638567 RNASE4P34096 147 aaKnown RBP13.45□□□□□ -0.26
SCARB2-210ENST00000638567 CFHR2P36980 270 aa13.45□□□□□ -0.26
SCARB2-210ENST00000638567 SNRPD3P62318 126 aaKnown RBP13.45□□□□□ -0.26
SCARB2-210ENST00000638567 OR2K2Q8NGT1 345 aa13.45□□□□□ -0.26
SCARB2-210ENST00000638567 ANKHD1Q8IWZ3 2542 aaKnown RBP13.45□□□□□ -0.26
SCARB2-210ENST00000638567 APOMO95445 188 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 ARMS2P0C7Q2 107 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 DPM2O94777 84 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 GUSBP1Q15486 140 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 ACACBO00763 2458 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 A0A1B0GWB2 263 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 AMN1Q8IY45 258 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 JKAMPQ9P055 326 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 TNCP24821 2201 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 COX6CP09669 75 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 CNTFRP26992 372 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 PRR20EP86478 221 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 PRR20CP86479 221 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 PRR20DP86480 221 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 PRR20BP86481 221 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 PRR20AP86496 221 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 PSG3Q16557 428 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 RNF5Q99942 180 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 PYGO2Q9BRQ0 406 aa13.44□□□□□ -0.26
SCARB2-210ENST00000638567 KIAA1549LQ6ZVL6 1849 aa13.43□□□□□ -0.26
SCARB2-210ENST00000638567 COL8A2P25067 703 aa13.43□□□□□ -0.26
SCARB2-210ENST00000638567 SEC11AP67812 179 aa13.43□□□□□ -0.26
SCARB2-210ENST00000638567 SFTA2Q6UW10 78 aa13.43□□□□□ -0.26
SCARB2-210ENST00000638567 SLC25A2Q9BXI2 301 aa13.43□□□□□ -0.26
SCARB2-210ENST00000638567 BEX4Q9NWD9 120 aaPredicted RBP13.43□□□□□ -0.26
SCARB2-210ENST00000638567 MEGF9Q9H1U4 602 aa13.43□□□□□ -0.26
SCARB2-210ENST00000638567 PPP1R17O96001 155 aa13.43□□□□□ -0.26
SCARB2-210ENST00000638567 F2Z2F3 143 aa13.42□□□□□ -0.26
SCARB2-210ENST00000638567 K7EN84 100 aa13.42□□□□□ -0.26
SCARB2-210ENST00000638567 SH2D1AO60880 128 aa13.42□□□□□ -0.26
SCARB2-210ENST00000638567 IGLC2P0DOY2 106 aa13.42□□□□□ -0.26
SCARB2-210ENST00000638567 IGLC3P0DOY3 106 aa13.42□□□□□ -0.26
SCARB2-210ENST00000638567 TMEM155Q4W5P6 130 aa13.42□□□□□ -0.26
SCARB2-210ENST00000638567 VMO1Q7Z5L0 202 aa13.42□□□□□ -0.26
SCARB2-210ENST00000638567 TPSG1Q9NRR2 321 aa13.42□□□□□ -0.26
SCARB2-210ENST00000638567 ZNF256Q9Y2P7 627 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-210ENST00000638567 A0A0G2JLM5 398 aa13.42□□□□□ -0.26
SCARB2-210ENST00000638567 E7EQL1 145 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms