RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 ZNF256Q9Y2P7 627 aaPredicted RBP12.88□□□□□ -0.35
CLN5-218ENST00000637397 DUX4L9Q6RFH8 374 aaPredicted RBP12.88□□□□□ -0.35
CLN5-218ENST00000637397 DTX1Q86Y01 620 aa12.88□□□□□ -0.35
CLN5-218ENST00000637397 Q8TAT8 98 aa12.88□□□□□ -0.35
CLN5-218ENST00000637397 IGKCP01834 107 aa12.88□□□□□ -0.35
CLN5-218ENST00000637397 RHOGP84095 191 aa12.88□□□□□ -0.35
CLN5-218ENST00000637397 RNF138Q8WVD3 245 aa12.88□□□□□ -0.35
CLN5-218ENST00000637397 SIGLEC9Q9Y336 463 aa12.88□□□□□ -0.35
CLN5-218ENST00000637397 PYGO2Q9BRQ0 406 aa12.88□□□□□ -0.35
CLN5-218ENST00000637397 ITGB1BP1O14713 200 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 LYPD2Q6UXB3 125 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 RPRMLQ8N4K4 120 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 OR9G4Q8NGQ1 327 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 LSM4Q9Y4Z0 139 aaKnown RBP12.87□□□□□ -0.35
CLN5-218ENST00000637397 MED13Q9UHV7 2174 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 ZNF106Q9H2Y7 1883 aaKnown RBP12.87□□□□□ -0.35
CLN5-218ENST00000637397 A0A0G2JLM5 398 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 C15orf65H3BRN8 121 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 ARMS2P0C7Q2 107 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 SAMD5Q5TGI4 173 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 GTSCR1Q86UQ5 136 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 GLMPQ8WWB7 406 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 CRXO43186 299 aaPredicted RBP12.87□□□□□ -0.35
CLN5-218ENST00000637397 IGHV3-11P01762 117 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 COA6Q5JTJ3 125 aaKnown RBP12.87□□□□□ -0.35
CLN5-218ENST00000637397 AMN1Q8IY45 258 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 OR5A1Q8NGJ0 315 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 A0A1B0GV72 72 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 UCNP55089 124 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 CENPVQ7Z7K6 275 aaPredicted RBP12.87□□□□□ -0.35
CLN5-218ENST00000637397 RCHY1Q96PM5 261 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 SLC50A1Q9BRV3 221 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 PCNX3Q9H6A9 2034 aa12.87□□□□□ -0.35
CLN5-218ENST00000637397 SAMD13Q5VXD3 122 aa12.86□□□□□ -0.35
CLN5-218ENST00000637397 Q6ZSR3 168 aa12.86□□□□□ -0.35
CLN5-218ENST00000637397 BCL6BQ8N143 479 aaPredicted RBP12.86□□□□□ -0.35
CLN5-218ENST00000637397 RNASE4P34096 147 aaKnown RBP12.86□□□□□ -0.35
CLN5-218ENST00000637397 SRSF1Q07955 248 aaKnown RBP eCLIP12.86□□□□□ -0.35
CLN5-218ENST00000637397 MBD3L4A6NDZ8 208 aaPredicted RBP12.86□□□□□ -0.35
CLN5-218ENST00000637397 MBD3L3A6NE82 208 aaPredicted RBP12.86□□□□□ -0.35
CLN5-218ENST00000637397 MBD3L5A6NJ08 208 aaPredicted RBP12.86□□□□□ -0.35
CLN5-218ENST00000637397 CEACAM4O75871 244 aa12.86□□□□□ -0.35
CLN5-218ENST00000637397 PPP1R17O96001 155 aa12.86□□□□□ -0.35
CLN5-218ENST00000637397 Q86TA4 180 aa12.86□□□□□ -0.35
CLN5-218ENST00000637397 FAM169BQ8N8A8 192 aa12.86□□□□□ -0.35
CLN5-218ENST00000637397 MBD3L2Q8NHZ7 208 aaPredicted RBP12.86□□□□□ -0.35
CLN5-218ENST00000637397 JMJD8Q96S16 334 aa12.86□□□□□ -0.35
CLN5-218ENST00000637397 GAGE12BA1L429 117 aa12.85□□□□□ -0.35
CLN5-218ENST00000637397 SMKR1H3BMG3 65 aa12.85□□□□□ -0.35
CLN5-218ENST00000637397 K7EN84 100 aa12.85□□□□□ -0.35
CLN5-218ENST00000637397 DKK1O94907 266 aa12.85□□□□□ -0.35
CLN5-218ENST00000637397 IFI27P40305 119 aaPredicted RBP12.85□□□□□ -0.35
CLN5-218ENST00000637397 IGFL4Q6B9Z1 124 aa12.85□□□□□ -0.35
CLN5-218ENST00000637397 C11orf52Q96A22 123 aa12.85□□□□□ -0.35
CLN5-218ENST00000637397 IGLL1P15814 213 aa12.85□□□□□ -0.35
CLN5-218ENST00000637397 TPTE2P1Q5T6R2 138 aa12.85□□□□□ -0.35
CLN5-218ENST00000637397 ZNF479Q96JC4 524 aa12.85□□□□□ -0.35
CLN5-218ENST00000637397 IGHV3OR16-12A0A075B7B8 117 aa12.85□□□□□ -0.35
CLN5-218ENST00000637397 NDUFA4L2Q9NRX3 87 aa12.85□□□□□ -0.35
CLN5-218ENST00000637397 PDLIM4P50479 330 aa12.85□□□□□ -0.35
CLN5-218ENST00000637397 PSG3Q16557 428 aa12.85□□□□□ -0.35
CLN5-218ENST00000637397 C17orf58Q2M2W7 97 aa12.85□□□□□ -0.35
CLN5-218ENST00000637397 NEU4Q8WWR8 484 aaPredicted RBP12.85□□□□□ -0.35
CLN5-218ENST00000637397 NUPR1O60356 82 aa12.84□□□□□ -0.35
CLN5-218ENST00000637397 TEX43Q6ZNM6 134 aa12.84□□□□□ -0.35
CLN5-218ENST00000637397 STPG4Q8N801 248 aa12.84□□□□□ -0.35
CLN5-218ENST00000637397 NUP210Q8TEM1 1887 aaPredicted RBP12.84□□□□□ -0.35
CLN5-218ENST00000637397 SPACA3Q8IXA5 215 aa12.84□□□□□ -0.35
CLN5-218ENST00000637397 DDB2Q92466 427 aa12.84□□□□□ -0.35
CLN5-218ENST00000637397 SLC25A2Q9BXI2 301 aa12.84□□□□□ -0.35
CLN5-218ENST00000637397 SH2D1AO60880 128 aa12.84□□□□□ -0.35
CLN5-218ENST00000637397 COL4A4P53420 1690 aaPredicted RBP12.84□□□□□ -0.35
CLN5-218ENST00000637397 PCNX2A6NKB5 2137 aa12.84□□□□□ -0.35
CLN5-218ENST00000637397 MMP23AO75900 390 aa12.83□□□□□ -0.36
CLN5-218ENST00000637397 ADIPOQQ15848 244 aa12.83□□□□□ -0.36
CLN5-218ENST00000637397 ZNF672Q499Z4 452 aaPredicted RBP12.83□□□□□ -0.36
CLN5-218ENST00000637397 CD5LO43866 347 aa12.83□□□□□ -0.36
CLN5-218ENST00000637397 SNRPD3P62318 126 aaKnown RBP12.83□□□□□ -0.36
CLN5-218ENST00000637397 TTC32Q5I0X7 151 aa12.83□□□□□ -0.36
CLN5-218ENST00000637397 PAPPA-AS1Q5QFB9 102 aa12.83□□□□□ -0.36
CLN5-218ENST00000637397 KIF26AQ9ULI4 1882 aaPredicted RBP12.83□□□□□ -0.36
CLN5-218ENST00000637397 KLRD1Q13241 179 aa12.83□□□□□ -0.36
CLN5-218ENST00000637397 GEMIN7Q9H840 131 aaKnown RBP12.83□□□□□ -0.36
CLN5-218ENST00000637397 LINC00527Q9UJ94 153 aa12.83□□□□□ -0.36
CLN5-218ENST00000637397 SMIM27A0A1W2PRY6 76 aa12.82□□□□□ -0.36
CLN5-218ENST00000637397 PRR20EP86478 221 aa12.82□□□□□ -0.36
CLN5-218ENST00000637397 PRR20CP86479 221 aa12.82□□□□□ -0.36
CLN5-218ENST00000637397 PRR20DP86480 221 aa12.82□□□□□ -0.36
CLN5-218ENST00000637397 PRR20BP86481 221 aa12.82□□□□□ -0.36
CLN5-218ENST00000637397 PRR20AP86496 221 aa12.82□□□□□ -0.36
CLN5-218ENST00000637397 WT1-ASQ06250 92 aa12.82□□□□□ -0.36
CLN5-218ENST00000637397 KIR3DS1Q14943 382 aa12.82□□□□□ -0.36
CLN5-218ENST00000637397 C15orf32Q32M92 178 aa12.82□□□□□ -0.36
CLN5-218ENST00000637397 DENND4AQ7Z401 1863 aa12.82□□□□□ -0.36
CLN5-218ENST00000637397 CHD3Q12873 2000 aaKnown RBP12.82□□□□□ -0.36
CLN5-218ENST00000637397 BUB1B-PAK6H3BSN5 160 aa12.82□□□□□ -0.36
CLN5-218ENST00000637397 SMAGPQ0VAQ4 97 aa12.82□□□□□ -0.36
CLN5-218ENST00000637397 SRRM4A7MD48 611 aaKnown RBP12.81□□□□□ -0.36
CLN5-218ENST00000637397 CFHR2P36980 270 aa12.81□□□□□ -0.36
CLN5-218ENST00000637397 MAJINQ3KP22 176 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms