RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 PTPRQQ9UMZ3 2332 aa12.48□□□□□ -0.41
CACNA1A-235ENST00000637004 SPRNQ5BIV9 151 aa12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 NEGR1Q7Z3B1 354 aa12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 Q86TA4 180 aa12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 OR10X1Q8NGY0 326 aa12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 RP1L1Q8IWN7 2480 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 SPRY3O43610 288 aa12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 GP9P14770 177 aa12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 BOD1L2Q8IYS8 172 aa12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 RPRMLQ8N4K4 120 aa12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 JMJD8Q96S16 334 aa12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 JKAMPQ9P055 326 aa12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 MRPL36Q9P0J6 103 aaKnown RBP12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 RNF7Q9UBF6 113 aa12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 SIVA1O15304 175 aa12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 FOXE3Q13461 319 aa12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 KIR3DS1Q14943 382 aa12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 DUX4L9Q6RFH8 374 aaPredicted RBP12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 OR4C13Q8NGP0 309 aa12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 TRGV9Q99603 122 aa12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 ZNRD1Q9P1U0 126 aa12.47□□□□□ -0.41
CACNA1A-235ENST00000637004 hADV38S2A0JD32 116 aa12.46□□□□□ -0.41
CACNA1A-235ENST00000637004 A1L4Q6 167 aa12.46□□□□□ -0.41
CACNA1A-235ENST00000637004 NCR2O95944 276 aa12.46□□□□□ -0.41
CACNA1A-235ENST00000637004 MSMPQ1L6U9 139 aa12.46□□□□□ -0.41
CACNA1A-235ENST00000637004 FAM169BQ8N8A8 192 aa12.46□□□□□ -0.41
CACNA1A-235ENST00000637004 GATD1Q8NB37 220 aa12.46□□□□□ -0.41
CACNA1A-235ENST00000637004 OR4X2Q8NGF9 303 aa12.46□□□□□ -0.41
CACNA1A-235ENST00000637004 OTORQ9NRC9 128 aa12.46□□□□□ -0.41
CACNA1A-235ENST00000637004 KALRNO60229 2985 aa12.46□□□□□ -0.42
CACNA1A-235ENST00000637004 SCGB2A2Q13296 93 aa12.46□□□□□ -0.42
CACNA1A-235ENST00000637004 CIARTQ8N365 385 aaPredicted RBP12.46□□□□□ -0.42
CACNA1A-235ENST00000637004 GAFA1Q96PS6 74 aa12.46□□□□□ -0.42
CACNA1A-235ENST00000637004 COL27A1Q8IZC6 1860 aaPredicted RBP12.45□□□□□ -0.42
CACNA1A-235ENST00000637004 CGB1A6NKQ9 187 aa12.45□□□□□ -0.42
CACNA1A-235ENST00000637004 SMAD7O15105 426 aaKnown RBP12.45□□□□□ -0.42
CACNA1A-235ENST00000637004 SMIM17P0DL12 118 aa12.45□□□□□ -0.42
CACNA1A-235ENST00000637004 CEACAM3P40198 252 aa12.45□□□□□ -0.42
CACNA1A-235ENST00000637004 GATA4P43694 442 aa12.45□□□□□ -0.42
CACNA1A-235ENST00000637004 LGALS9BQ3B8N2 356 aa12.45□□□□□ -0.42
CACNA1A-235ENST00000637004 LGALS9CQ6DKI2 356 aa12.45□□□□□ -0.42
CACNA1A-235ENST00000637004 USP24Q9UPU5 2620 aa12.45□□□□□ -0.42
CACNA1A-235ENST00000637004 LGALS7P47929 136 aa12.45□□□□□ -0.42
CACNA1A-235ENST00000637004 C10orf55Q5SWW7 151 aa12.45□□□□□ -0.42
CACNA1A-235ENST00000637004 DEFB108BQ8NET1 73 aa12.45□□□□□ -0.42
CACNA1A-235ENST00000637004 SMPXQ9UHP9 88 aa12.45□□□□□ -0.42
CACNA1A-235ENST00000637004 PRNTQ86SH4 94 aa12.44□□□□□ -0.42
CACNA1A-235ENST00000637004 OR8A1Q8NGG7 326 aa12.44□□□□□ -0.42
CACNA1A-235ENST00000637004 C8orf46Q8TAG6 207 aa12.44□□□□□ -0.42
CACNA1A-235ENST00000637004 CCL13Q99616 98 aa12.44□□□□□ -0.42
CACNA1A-235ENST00000637004 DKK4Q9UBT3 224 aa12.44□□□□□ -0.42
CACNA1A-235ENST00000637004 CRYGCP07315 174 aa12.44□□□□□ -0.42
CACNA1A-235ENST00000637004 ARMS2P0C7Q2 107 aa12.44□□□□□ -0.42
CACNA1A-235ENST00000637004 SRSF12Q8WXF0 261 aaKnown RBP12.44□□□□□ -0.42
CACNA1A-235ENST00000637004 TMEM190Q8WZ59 177 aa12.44□□□□□ -0.42
CACNA1A-235ENST00000637004 LINC00312Q9Y6C7 94 aa12.44□□□□□ -0.42
CACNA1A-235ENST00000637004 TRBV6-1A0A0K0K1D8 114 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 H3BTX0 84 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 Q6AWC8 147 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 ZNF788Q6ZQV5 615 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 BHLHA15Q7RTS1 189 aaPredicted RBP12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 ZADH2Q8N4Q0 377 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 FAM216BQ8N7L0 139 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 C9orf106Q8NAJ2 232 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 SPCS1Q9Y6A9 102 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 MED13Q9UHV7 2174 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 TRAV8-1A0A0A6YYK1 113 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 A0A1W2PPM0 123 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 IGHG3P01860 377 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 RBPJQ06330 500 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 ATP1A1-AS1Q5TC04 95 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 PRR14LQ5THK1 2151 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 THYN1Q9P016 225 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 HILPDAQ9Y5L2 63 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 OVOL3O00110 214 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 PLP1P60201 277 aa12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 ZNF71Q9NQZ8 489 aaPredicted RBP12.43□□□□□ -0.42
CACNA1A-235ENST00000637004 DSCAML1Q8TD84 2053 aa12.42□□□□□ -0.42
CACNA1A-235ENST00000637004 GLRXP35754 106 aa12.42□□□□□ -0.42
CACNA1A-235ENST00000637004 ADAMTSL5Q6ZMM2 481 aa12.42□□□□□ -0.42
CACNA1A-235ENST00000637004 GOLT1AQ6ZVE7 132 aa12.42□□□□□ -0.42
CACNA1A-235ENST00000637004 NPFFR1Q9GZQ6 430 aa12.42□□□□□ -0.42
CACNA1A-235ENST00000637004 SLC25A15Q9Y619 301 aa12.42□□□□□ -0.42
CACNA1A-235ENST00000637004 NBASA2RRP1 2371 aa12.42□□□□□ -0.42
CACNA1A-235ENST00000637004 RELNP78509 3460 aa12.42□□□□□ -0.42
CACNA1A-235ENST00000637004 IGLV2-11P01706 119 aa12.42□□□□□ -0.42
CACNA1A-235ENST00000637004 FABP2P12104 132 aa12.42□□□□□ -0.42
CACNA1A-235ENST00000637004 VMA21Q3ZAQ7 101 aa12.42□□□□□ -0.42
CACNA1A-235ENST00000637004 TMEM116Q8NCL8 245 aa12.42□□□□□ -0.42
CACNA1A-235ENST00000637004 TMEM186Q96B77 213 aa12.42□□□□□ -0.42
CACNA1A-235ENST00000637004 ZNF48Q96MX3 618 aaPredicted RBP12.42□□□□□ -0.42
CACNA1A-235ENST00000637004 HIGD1AQ9Y241 93 aa12.42□□□□□ -0.42
CACNA1A-235ENST00000637004 A0A1W2PPI3 338 aa12.41□□□□□ -0.42
CACNA1A-235ENST00000637004 IFI27P40305 119 aaPredicted RBP12.41□□□□□ -0.42
CACNA1A-235ENST00000637004 NAA38Q9BRA0 125 aaKnown RBP12.41□□□□□ -0.42
CACNA1A-235ENST00000637004 MSRB2Q9Y3D2 182 aa12.41□□□□□ -0.42
CACNA1A-235ENST00000637004 DSCAMO60469 2012 aa12.41□□□□□ -0.42
CACNA1A-235ENST00000637004 KLK10O43240 276 aa12.41□□□□□ -0.42
CACNA1A-235ENST00000637004 HOXB4P17483 251 aaPredicted RBP12.41□□□□□ -0.42
CACNA1A-235ENST00000637004 MC5RP33032 325 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms