RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 DEFA6Q01524 100 aa12□□□□□ -0.49
CLN6-216ENST00000636876 SIGLEC15Q6ZMC9 328 aa12□□□□□ -0.49
CLN6-216ENST00000636876 GBGT1Q8N5D6 347 aa12□□□□□ -0.49
CLN6-216ENST00000636876 OR2G3Q8NGZ4 309 aa12□□□□□ -0.49
CLN6-216ENST00000636876 GNPNAT1Q96EK6 184 aaPredicted RBP12□□□□□ -0.49
CLN6-216ENST00000636876 PRR25Q96S07 402 aa12□□□□□ -0.49
CLN6-216ENST00000636876 SLC25A32Q9H2D1 315 aa12□□□□□ -0.49
CLN6-216ENST00000636876 RNF24Q9Y225 148 aa12□□□□□ -0.49
CLN6-216ENST00000636876 PAFAH1B2P68402 229 aa11.99□□□□□ -0.49
CLN6-216ENST00000636876 MORN5Q5VZ52 161 aa11.99□□□□□ -0.49
CLN6-216ENST00000636876 STXBP6Q8NFX7 210 aa11.99□□□□□ -0.49
CLN6-216ENST00000636876 GPR82Q96P67 336 aa11.99□□□□□ -0.49
CLN6-216ENST00000636876 SH3BGRL3Q9H299 93 aa11.99□□□□□ -0.49
CLN6-216ENST00000636876 MS4A6AQ9H2W1 248 aa11.99□□□□□ -0.49
CLN6-216ENST00000636876 TRAV2A0A0B4J234 112 aa11.98□□□□□ -0.49
CLN6-216ENST00000636876 OR4C46A6NHA9 309 aa11.98□□□□□ -0.49
CLN6-216ENST00000636876 PRB2P02812 416 aaPredicted RBP11.98□□□□□ -0.49
CLN6-216ENST00000636876 GALR1P47211 349 aa11.98□□□□□ -0.49
CLN6-216ENST00000636876 TFPI2P48307 235 aa11.98□□□□□ -0.49
CLN6-216ENST00000636876 SERF2P84101 59 aa11.98□□□□□ -0.49
CLN6-216ENST00000636876 ACOT6Q3I5F7 207 aaPredicted RBP11.98□□□□□ -0.49
CLN6-216ENST00000636876 C9orf62Q8N4C0 152 aa11.98□□□□□ -0.49
CLN6-216ENST00000636876 ZNF471Q9BX82 626 aaPredicted RBP11.98□□□□□ -0.49
CLN6-216ENST00000636876 AURKAIP1Q9NWT8 199 aaPredicted RBP11.98□□□□□ -0.49
CLN6-216ENST00000636876 DNASE2O00115 360 aaPredicted RBP11.97□□□□□ -0.49
CLN6-216ENST00000636876 RPL7P18124 248 aaKnown RBP11.97□□□□□ -0.49
CLN6-216ENST00000636876 M6PRP20645 277 aa11.97□□□□□ -0.49
CLN6-216ENST00000636876 FAM78BQ5VT40 261 aa11.97□□□□□ -0.49
CLN6-216ENST00000636876 SPATA31B1PQ5VZV4 182 aa11.97□□□□□ -0.49
CLN6-216ENST00000636876 MRPL32Q9BYC8 188 aaKnown RBP11.97□□□□□ -0.49
CLN6-216ENST00000636876 NRN1Q9NPD7 142 aa11.97□□□□□ -0.49
CLN6-216ENST00000636876 SMAD5-AS1Q9Y6J3 95 aa11.97□□□□□ -0.49
CLN6-216ENST00000636876 TRAV5A0A0B4J249 113 aa11.96□□□□□ -0.49
CLN6-216ENST00000636876 K7EQG2 157 aa11.96□□□□□ -0.49
CLN6-216ENST00000636876 MRPS12O15235 138 aaKnown RBP11.96□□□□□ -0.49
CLN6-216ENST00000636876 RAB2AP61019 212 aa11.96□□□□□ -0.49
CLN6-216ENST00000636876 EIF5AP63241 154 aaKnown RBP11.96□□□□□ -0.49
CLN6-216ENST00000636876 MIR17HGQ75NE6 70 aa11.96□□□□□ -0.49
CLN6-216ENST00000636876 GTSCR1Q86UQ5 136 aa11.96□□□□□ -0.49
CLN6-216ENST00000636876 WFDC3Q8IUB2 231 aa11.96□□□□□ -0.49
CLN6-216ENST00000636876 SEPSECSQ9HD40 501 aaKnown RBP11.96□□□□□ -0.49
CLN6-216ENST00000636876 FUT9Q9Y231 359 aa11.96□□□□□ -0.49
CLN6-216ENST00000636876 MBP02144 154 aa11.95□□□□□ -0.5
CLN6-216ENST00000636876 CD7P09564 240 aa11.95□□□□□ -0.5
CLN6-216ENST00000636876 SPP1P10451 314 aa11.95□□□□□ -0.5
CLN6-216ENST00000636876 NKX2-5P52952 324 aaPredicted RBP11.95□□□□□ -0.5
CLN6-216ENST00000636876 CD81P60033 236 aa11.95□□□□□ -0.5
CLN6-216ENST00000636876 RHOBP62745 196 aa11.95□□□□□ -0.5
CLN6-216ENST00000636876 BPIFA4PQ86YQ2 179 aa11.95□□□□□ -0.5
CLN6-216ENST00000636876 Q8N1Y9 231 aa11.95□□□□□ -0.5
CLN6-216ENST00000636876 STOML3Q8TAV4 291 aa11.95□□□□□ -0.5
CLN6-216ENST00000636876 DCANP1Q8TF63 244 aa11.95□□□□□ -0.5
CLN6-216ENST00000636876 TPT1P13693 172 aaKnown RBP11.94□□□□□ -0.5
CLN6-216ENST00000636876 ATF4P18848 351 aaPredicted RBP11.94□□□□□ -0.5
CLN6-216ENST00000636876 C4BPBP20851 252 aa11.94□□□□□ -0.5
CLN6-216ENST00000636876 MEOX2P50222 304 aa11.94□□□□□ -0.5
CLN6-216ENST00000636876 BAP18Q8IXM2 172 aa11.94□□□□□ -0.5
CLN6-216ENST00000636876 OR10G4Q8NGN3 311 aa11.94□□□□□ -0.5
CLN6-216ENST00000636876 OR10G9Q8NGN4 311 aa11.94□□□□□ -0.5
CLN6-216ENST00000636876 OR10G7Q8NGN6 311 aa11.94□□□□□ -0.5
CLN6-216ENST00000636876 FAM167A-AS1Q96KT0 104 aa11.94□□□□□ -0.5
CLN6-216ENST00000636876 C17orf77Q96MU5 243 aa11.94□□□□□ -0.5
CLN6-216ENST00000636876 A0A087X0K7 114 aa11.93□□□□□ -0.5
CLN6-216ENST00000636876 A0A1W2PPV4 95 aa11.93□□□□□ -0.5
CLN6-216ENST00000636876 K7EIL1 84 aa11.93□□□□□ -0.5
CLN6-216ENST00000636876 ODF3L2Q3SX64 289 aa11.93□□□□□ -0.5
CLN6-216ENST00000636876 TMEM41BQ5BJD5 291 aa11.93□□□□□ -0.5
CLN6-216ENST00000636876 FAM122CQ6P4D5 195 aa11.93□□□□□ -0.5
CLN6-216ENST00000636876 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.93□□□□□ -0.5
CLN6-216ENST00000636876 SLC51BQ86UW2 128 aa11.93□□□□□ -0.5
CLN6-216ENST00000636876 RPP25LQ8N5L8 163 aaKnown RBP11.93□□□□□ -0.5
CLN6-216ENST00000636876 FAM24BQ8N5W8 94 aa11.93□□□□□ -0.5
CLN6-216ENST00000636876 FAM110AQ9BQ89 295 aa11.93□□□□□ -0.5
CLN6-216ENST00000636876 SLC25A2Q9BXI2 301 aa11.93□□□□□ -0.5
CLN6-216ENST00000636876 RPRMQ9NS64 109 aa11.93□□□□□ -0.5
CLN6-216ENST00000636876 C19orf73Q9NVV2 129 aa11.93□□□□□ -0.5
CLN6-216ENST00000636876 TMEM14CQ9P0S9 112 aa11.93□□□□□ -0.5
CLN6-216ENST00000636876 SOCS3O14543 225 aa11.92□□□□□ -0.5
CLN6-216ENST00000636876 SEC11BP0C7V7 166 aa11.92□□□□□ -0.5
CLN6-216ENST00000636876 CMC4P56277 68 aaPredicted RBP11.92□□□□□ -0.5
CLN6-216ENST00000636876 AKR1C8PQ5T2L2 129 aa11.92□□□□□ -0.5
CLN6-216ENST00000636876 SAMD13Q5VXD3 122 aa11.92□□□□□ -0.5
CLN6-216ENST00000636876 OR11H12B2RN74 326 aa11.91□□□□□ -0.5
CLN6-216ENST00000636876 ZNF688P0C7X2 276 aa11.91□□□□□ -0.5
CLN6-216ENST00000636876 IGLC2P0DOY2 106 aa11.91□□□□□ -0.5
CLN6-216ENST00000636876 PYYP10082 97 aa11.91□□□□□ -0.5
CLN6-216ENST00000636876 CDC34P49427 236 aaPredicted RBP11.91□□□□□ -0.5
CLN6-216ENST00000636876 TAS2R45P59539 299 aa11.91□□□□□ -0.5
CLN6-216ENST00000636876 KHDC3LQ587J8 217 aa11.91□□□□□ -0.5
CLN6-216ENST00000636876 WFDC10AQ9H1F0 79 aa11.91□□□□□ -0.5
CLN6-216ENST00000636876 HRH4Q9H3N8 390 aa11.91□□□□□ -0.5
CLN6-216ENST00000636876 MAP6D1Q9H9H5 199 aa11.91□□□□□ -0.5
CLN6-216ENST00000636876 UBQLN2Q9UHD9 624 aa11.91□□□□□ -0.5
CLN6-216ENST00000636876 H3BQ15 152 aa11.9□□□□□ -0.5
CLN6-216ENST00000636876 ISLRO14498 428 aa11.9□□□□□ -0.5
CLN6-216ENST00000636876 OR7C2O60412 319 aa11.9□□□□□ -0.5
CLN6-216ENST00000636876 EIF3GO75821 320 aaKnown RBP eCLIP11.9□□□□□ -0.5
CLN6-216ENST00000636876 HIST1H1EP10412 219 aaKnown RBP11.9□□□□□ -0.5
CLN6-216ENST00000636876 ID1P41134 155 aa11.9□□□□□ -0.5
CLN6-216ENST00000636876 PSMB3P49720 205 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms