RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 NDUFA6P56556 154 aa11.19□□□□□ -0.62
LINC00339-208ENST00000634934 RPL23P62829 140 aaKnown RBP11.19□□□□□ -0.62
LINC00339-208ENST00000634934 CD69Q07108 199 aa11.19□□□□□ -0.62
LINC00339-208ENST00000634934 FFAR4Q5NUL3 377 aa11.19□□□□□ -0.62
LINC00339-208ENST00000634934 VN1R17PQ8TDU5 208 aa11.19□□□□□ -0.62
LINC00339-208ENST00000634934 UBE2E2Q96LR5 201 aa11.19□□□□□ -0.62
LINC00339-208ENST00000634934 GNB4Q9HAV0 340 aa11.19□□□□□ -0.62
LINC00339-208ENST00000634934 C21orf62Q9NYP8 219 aa11.19□□□□□ -0.62
LINC00339-208ENST00000634934 TSSC4Q9Y5U2 329 aaPredicted RBP11.19□□□□□ -0.62
LINC00339-208ENST00000634934 PRSS46E5RG02 174 aa11.18□□□□□ -0.62
LINC00339-208ENST00000634934 TRGC1P0CF51 173 aa11.18□□□□□ -0.62
LINC00339-208ENST00000634934 GPX4P36969 197 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-208ENST00000634934 FGF8P55075 233 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-208ENST00000634934 Q56UQ5 140 aa11.18□□□□□ -0.62
LINC00339-208ENST00000634934 PYY3Q5JQD4 70 aa11.18□□□□□ -0.62
LINC00339-208ENST00000634934 C18orf65Q6ZTR6 163 aa11.18□□□□□ -0.62
LINC00339-208ENST00000634934 FRZBQ92765 325 aa11.18□□□□□ -0.62
LINC00339-208ENST00000634934 RAB24Q969Q5 203 aa11.18□□□□□ -0.62
LINC00339-208ENST00000634934 SLC35E1Q96K37 410 aa11.18□□□□□ -0.62
LINC00339-208ENST00000634934 PARLQ9H300 379 aa11.18□□□□□ -0.62
LINC00339-208ENST00000634934 TRAV9-1A0A075B6T8 112 aa11.17□□□□□ -0.62
LINC00339-208ENST00000634934 TRBV7-1A0A0A6YYK4 115 aa11.17□□□□□ -0.62
LINC00339-208ENST00000634934 H7BYZ3 331 aa11.17□□□□□ -0.62
LINC00339-208ENST00000634934 YIF1AO95070 293 aa11.17□□□□□ -0.62
LINC00339-208ENST00000634934 CDC34P49427 236 aaPredicted RBP11.17□□□□□ -0.62
LINC00339-208ENST00000634934 MFAP4P55083 255 aa11.17□□□□□ -0.62
LINC00339-208ENST00000634934 ELLP55199 621 aaPredicted RBP11.17□□□□□ -0.62
LINC00339-208ENST00000634934 CLEC19AQ6UXS0 136 aa11.17□□□□□ -0.62
LINC00339-208ENST00000634934 TMEM183AQ8IXX5 376 aa11.17□□□□□ -0.62
LINC00339-208ENST00000634934 C3orf56Q8N813 242 aa11.17□□□□□ -0.62
LINC00339-208ENST00000634934 KLHL30-AS1Q8NEE0 82 aa11.17□□□□□ -0.62
LINC00339-208ENST00000634934 ZNF502Q8TBZ5 544 aa11.17□□□□□ -0.62
LINC00339-208ENST00000634934 CACNG8Q8WXS5 425 aa11.17□□□□□ -0.62
LINC00339-208ENST00000634934 MRPL36Q9P0J6 103 aaKnown RBP11.17□□□□□ -0.62
LINC00339-208ENST00000634934 URGCP-MRPS24S4R325 110 aa11.17□□□□□ -0.62
LINC00339-208ENST00000634934 GAMTQ14353 236 aa11.16□□□□□ -0.62
LINC00339-208ENST00000634934 NSUN5P1Q3KNT7 163 aa11.16□□□□□ -0.62
LINC00339-208ENST00000634934 NPIPB3Q92617 1050 aa11.16□□□□□ -0.62
LINC00339-208ENST00000634934 CCDC140Q96MF4 163 aa11.16□□□□□ -0.62
LINC00339-208ENST00000634934 OR2T8A6NH00 312 aa11.15□□□□□ -0.62
LINC00339-208ENST00000634934 GNG7O60262 68 aa11.15□□□□□ -0.62
LINC00339-208ENST00000634934 CLEC3BP05452 202 aa11.15□□□□□ -0.62
LINC00339-208ENST00000634934 LGALS1P09382 135 aaKnown RBP11.15□□□□□ -0.62
LINC00339-208ENST00000634934 GPR183P32249 361 aa11.15□□□□□ -0.62
LINC00339-208ENST00000634934 OR4X1Q8NH49 305 aa11.15□□□□□ -0.62
LINC00339-208ENST00000634934 C4orf3Q8WVX3 66 aa11.15□□□□□ -0.62
LINC00339-208ENST00000634934 CITED1Q99966 193 aa11.15□□□□□ -0.62
LINC00339-208ENST00000634934 ZMAT5Q9UDW3 170 aaKnown RBP11.15□□□□□ -0.62
LINC00339-208ENST00000634934 LSM4Q9Y4Z0 139 aaKnown RBP11.15□□□□□ -0.62
LINC00339-208ENST00000634934 LY96Q9Y6Y9 160 aa11.15□□□□□ -0.62
LINC00339-208ENST00000634934 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.14□□□□□ -0.63
LINC00339-208ENST00000634934 TRBV12-3P01733 135 aa11.14□□□□□ -0.63
LINC00339-208ENST00000634934 STAG3L2P0CL84 134 aa11.14□□□□□ -0.63
LINC00339-208ENST00000634934 STAG3L3P0CL85 134 aa11.14□□□□□ -0.63
LINC00339-208ENST00000634934 GALR1P47211 349 aa11.14□□□□□ -0.63
LINC00339-208ENST00000634934 ADIRFQ15847 76 aa11.14□□□□□ -0.63
LINC00339-208ENST00000634934 KCNIP4Q6PIL6 250 aa11.14□□□□□ -0.63
LINC00339-208ENST00000634934 C8orf86Q6ZUL3 223 aa11.14□□□□□ -0.63
LINC00339-208ENST00000634934 NDUFA11Q86Y39 141 aa11.14□□□□□ -0.63
LINC00339-208ENST00000634934 TXN2Q99757 166 aa11.14□□□□□ -0.63
LINC00339-208ENST00000634934 ZNF747Q9BV97 191 aa11.14□□□□□ -0.63
LINC00339-208ENST00000634934 SLC25A22Q9H936 323 aa11.14□□□□□ -0.63
LINC00339-208ENST00000634934 PEF1Q9UBV8 284 aaKnown RBP11.14□□□□□ -0.63
LINC00339-208ENST00000634934 PPP5D1E7EU14 171 aa11.14□□□□□ -0.63
LINC00339-208ENST00000634934 F8W735 103 aaPredicted RBP11.14□□□□□ -0.63
LINC00339-208ENST00000634934 ARL3P36405 182 aa11.14□□□□□ -0.63
LINC00339-208ENST00000634934 DEFB136Q30KP8 78 aa11.14□□□□□ -0.63
LINC00339-208ENST00000634934 ACTL10Q5JWF8 245 aa11.14□□□□□ -0.63
LINC00339-208ENST00000634934 TMEM116Q8NCL8 245 aa11.14□□□□□ -0.63
LINC00339-208ENST00000634934 OR4F4Q96R69 305 aa11.14□□□□□ -0.63
LINC00339-208ENST00000634934 PFDN5Q99471 154 aa11.14□□□□□ -0.63
LINC00339-208ENST00000634934 ADARB2-AS1A8MUL3 147 aa11.13□□□□□ -0.63
LINC00339-208ENST00000634934 C11orf94C9JXX5 98 aa11.13□□□□□ -0.63
LINC00339-208ENST00000634934 OR10J1P30954 320 aa11.13□□□□□ -0.63
LINC00339-208ENST00000634934 FCGR2BP31994 310 aaPredicted RBP11.13□□□□□ -0.63
LINC00339-208ENST00000634934 FAM209BQ5JX69 171 aa11.13□□□□□ -0.63
LINC00339-208ENST00000634934 TMEM144Q7Z5S9 345 aa11.13□□□□□ -0.63
LINC00339-208ENST00000634934 NPVFQ9HCQ7 196 aa11.13□□□□□ -0.63
LINC00339-208ENST00000634934 TRRAPQ9Y4A5 3859 aa11.12□□□□□ -0.63
LINC00339-208ENST00000634934 PAGE4O60829 102 aa11.12□□□□□ -0.63
LINC00339-208ENST00000634934 SCGB2A1O75556 95 aa11.12□□□□□ -0.63
LINC00339-208ENST00000634934 CXorf1O96002 111 aa11.12□□□□□ -0.63
LINC00339-208ENST00000634934 JOSD1Q15040 202 aaPredicted RBP11.12□□□□□ -0.63
LINC00339-208ENST00000634934 TREML4Q6UXN2 200 aa11.12□□□□□ -0.63
LINC00339-208ENST00000634934 LINC01551Q86U37 167 aa11.12□□□□□ -0.63
LINC00339-208ENST00000634934 OR11H1Q8NG94 326 aa11.12□□□□□ -0.63
LINC00339-208ENST00000634934 OR10D4PQ8NGN7 298 aa11.12□□□□□ -0.63
LINC00339-208ENST00000634934 OR1N2Q8NGR9 330 aa11.12□□□□□ -0.63
LINC00339-208ENST00000634934 DPF1Q92782 380 aa11.12□□□□□ -0.63
LINC00339-208ENST00000634934 C11orf52Q96A22 123 aa11.12□□□□□ -0.63
LINC00339-208ENST00000634934 DUX3Q96PT4 197 aa11.12□□□□□ -0.63
LINC00339-208ENST00000634934 HIST1H2BLQ99880 126 aa11.12□□□□□ -0.63
LINC00339-208ENST00000634934 CHRDL1Q9BU40 450 aa11.12□□□□□ -0.63
LINC00339-208ENST00000634934 GPR61Q9BZJ8 451 aa11.12□□□□□ -0.63
LINC00339-208ENST00000634934 IGHV4OR15-8A0A075B7B6 117 aa11.11□□□□□ -0.63
LINC00339-208ENST00000634934 TRAV30A0A087WSZ9 112 aa11.11□□□□□ -0.63
LINC00339-208ENST00000634934 A0A087WW49 117 aa11.11□□□□□ -0.63
LINC00339-208ENST00000634934 IGHV3-35A0A0C4DH35 117 aa11.11□□□□□ -0.63
LINC00339-208ENST00000634934 BMPR1BO00238 502 aa11.11□□□□□ -0.63
LINC00339-208ENST00000634934 GCGP01275 180 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms