RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 LRRC37A5PQ49AS3 106 aa11.48□□□□□ -0.57
LINC00339-207ENST00000634712 ARV1Q9H2C2 271 aa11.48□□□□□ -0.57
LINC00339-207ENST00000634712 E5RGE8 158 aa11.47□□□□□ -0.57
LINC00339-207ENST00000634712 H3BMM0 161 aa11.47□□□□□ -0.57
LINC00339-207ENST00000634712 SOCS3O14543 225 aa11.47□□□□□ -0.57
LINC00339-207ENST00000634712 COX7A2P2O60397 106 aa11.47□□□□□ -0.57
LINC00339-207ENST00000634712 HLA-DRB4P13762 266 aa11.47□□□□□ -0.57
LINC00339-207ENST00000634712 ATP6V1FQ16864 119 aa11.47□□□□□ -0.57
LINC00339-207ENST00000634712 EBLN2Q6P2I7 272 aa11.47□□□□□ -0.57
LINC00339-207ENST00000634712 Q6ZRG5 221 aa11.47□□□□□ -0.57
LINC00339-207ENST00000634712 UHRF2Q96PU4 802 aa11.47□□□□□ -0.57
LINC00339-207ENST00000634712 MGST2Q99735 147 aa11.47□□□□□ -0.57
LINC00339-207ENST00000634712 C1QTNF4Q9BXJ3 329 aa11.47□□□□□ -0.57
LINC00339-207ENST00000634712 SLC25A31Q9H0C2 315 aa11.47□□□□□ -0.57
LINC00339-207ENST00000634712 RPRMQ9NS64 109 aa11.47□□□□□ -0.57
LINC00339-207ENST00000634712 HLA-DRB4X5D2U9 266 aa11.47□□□□□ -0.57
LINC00339-207ENST00000634712 KMT2CQ8NEZ4 4911 aaKnown RBP11.46□□□□□ -0.57
LINC00339-207ENST00000634712 IGSF23A1L1A6 192 aa11.46□□□□□ -0.57
LINC00339-207ENST00000634712 CXorf65A6NEN9 183 aa11.46□□□□□ -0.57
LINC00339-207ENST00000634712 IGKV3-20P01619 116 aa11.46□□□□□ -0.57
LINC00339-207ENST00000634712 BAXQ07812 192 aa11.46□□□□□ -0.57
LINC00339-207ENST00000634712 SPATA31B1PQ5VZV4 182 aa11.46□□□□□ -0.57
LINC00339-207ENST00000634712 FOXI2Q6ZQN5 318 aa11.46□□□□□ -0.57
LINC00339-207ENST00000634712 OR4B1Q8NGF8 309 aa11.46□□□□□ -0.57
LINC00339-207ENST00000634712 LRRC20Q8TCA0 184 aa11.46□□□□□ -0.57
LINC00339-207ENST00000634712 SAV1Q9H4B6 383 aaPredicted RBP11.46□□□□□ -0.57
LINC00339-207ENST00000634712 ELOA3CA0A087WX78 387 aaPredicted RBP11.45□□□□□ -0.58
LINC00339-207ENST00000634712 UBE2L5PA0A1B0GUS4 154 aa11.45□□□□□ -0.58
LINC00339-207ENST00000634712 C4BPBP20851 252 aa11.45□□□□□ -0.58
LINC00339-207ENST00000634712 PMS2P11Q13670 270 aa11.45□□□□□ -0.58
LINC00339-207ENST00000634712 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.45□□□□□ -0.58
LINC00339-207ENST00000634712 PATE2Q6UY27 113 aa11.45□□□□□ -0.58
LINC00339-207ENST00000634712 LINC00305Q7Z4B0 112 aa11.45□□□□□ -0.58
LINC00339-207ENST00000634712 CLEC5AQ9NY25 188 aa11.45□□□□□ -0.58
LINC00339-207ENST00000634712 WDR83OSQ9Y284 106 aa11.45□□□□□ -0.58
LINC00339-207ENST00000634712 GIG44P09565 113 aaPredicted RBP11.44□□□□□ -0.58
LINC00339-207ENST00000634712 DEFB1P60022 68 aa11.44□□□□□ -0.58
LINC00339-207ENST00000634712 VWC2Q2TAL6 325 aa11.44□□□□□ -0.58
LINC00339-207ENST00000634712 GDF5OSQ5U4N7 250 aa11.44□□□□□ -0.58
LINC00339-207ENST00000634712 C10orf113Q5VZT2 155 aa11.44□□□□□ -0.58
LINC00339-207ENST00000634712 OR1L4Q8NGR5 311 aa11.44□□□□□ -0.58
LINC00339-207ENST00000634712 XCL2Q9UBD3 114 aa11.44□□□□□ -0.58
LINC00339-207ENST00000634712 PET100P0DJ07 73 aa11.43□□□□□ -0.58
LINC00339-207ENST00000634712 FGF7P21781 194 aa11.43□□□□□ -0.58
LINC00339-207ENST00000634712 EWSR1Q01844 656 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINC00339-207ENST00000634712 NHLH2Q02577 135 aa11.43□□□□□ -0.58
LINC00339-207ENST00000634712 MIC13Q5XKP0 118 aa11.43□□□□□ -0.58
LINC00339-207ENST00000634712 PPP1R1CQ8WVI7 109 aa11.43□□□□□ -0.58
LINC00339-207ENST00000634712 DNAJC4Q9NNZ3 241 aa11.43□□□□□ -0.58
LINC00339-207ENST00000634712 OR5AC2Q9NZP5 309 aa11.43□□□□□ -0.58
LINC00339-207ENST00000634712 F6UB75 175 aa11.42□□□□□ -0.58
LINC00339-207ENST00000634712 DEFB4AO15263 64 aa11.42□□□□□ -0.58
LINC00339-207ENST00000634712 PTTG1O95997 202 aa11.42□□□□□ -0.58
LINC00339-207ENST00000634712 MIFP14174 115 aa11.42□□□□□ -0.58
LINC00339-207ENST00000634712 H2BFSP57053 126 aa11.42□□□□□ -0.58
LINC00339-207ENST00000634712 BPIFA4PQ86YQ2 179 aa11.42□□□□□ -0.58
LINC00339-207ENST00000634712 TMEM37Q8WXS4 190 aa11.42□□□□□ -0.58
LINC00339-207ENST00000634712 C20orf173Q96LM9 149 aa11.42□□□□□ -0.58
LINC00339-207ENST00000634712 PFDN5Q99471 154 aa11.42□□□□□ -0.58
LINC00339-207ENST00000634712 C11orf68Q9H3H3 251 aaKnown RBP11.42□□□□□ -0.58
LINC00339-207ENST00000634712 CSMD3Q7Z407 3707 aa11.42□□□□□ -0.58
LINC00339-207ENST00000634712 A0A0J9YX75 114 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 MPDU1O75352 247 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 RPL29P47914 159 aaKnown RBP11.41□□□□□ -0.58
LINC00339-207ENST00000634712 FXYD7P58549 80 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 B2MP61769 119 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 PSG9Q00887 426 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 FAM78BQ5VT40 261 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 IGFL4Q6B9Z1 124 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 OR5C1Q8NGR4 320 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 C11orf45Q8TAV5 145 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 C17orf77Q96MU5 243 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 CLUHP3Q96NS8 147 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 MFFQ9GZY8 342 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 A0A087X0K7 114 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 NUPR2A6NF83 97 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 ZNF705EA8MWA4 302 aaPredicted RBP11.41□□□□□ -0.58
LINC00339-207ENST00000634712 H0YIZ8 118 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 JTBO76095 146 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 DUSP14O95147 198 aaKnown RBP11.41□□□□□ -0.58
LINC00339-207ENST00000634712 PRR20EP86478 221 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 PRR20CP86479 221 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 PRR20DP86480 221 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 PRR20BP86481 221 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 PRR20AP86496 221 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 OPCMLQ14982 345 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 RNF182Q8N6D2 247 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 CSNK1G2-AS1Q8NCQ2 148 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 ZNF738Q8NE65 137 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 SLC39A9Q9NUM3 307 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 PXMP4Q9Y6I8 212 aa11.41□□□□□ -0.58
LINC00339-207ENST00000634712 TENM2Q9NT68 2774 aa11.4□□□□□ -0.58
LINC00339-207ENST00000634712 STARD9Q9P2P6 4700 aa11.4□□□□□ -0.58
LINC00339-207ENST00000634712 TRAV8-2A0A0B4J237 113 aa11.4□□□□□ -0.59
LINC00339-207ENST00000634712 IGHV4-28A0A0C4DH34 117 aa11.4□□□□□ -0.59
LINC00339-207ENST00000634712 MPC2O95563 127 aa11.4□□□□□ -0.59
LINC00339-207ENST00000634712 CLINT1Q14677 625 aa11.4□□□□□ -0.59
LINC00339-207ENST00000634712 ZNF709Q8N972 641 aa11.4□□□□□ -0.59
LINC00339-207ENST00000634712 CHAC2Q8WUX2 184 aa11.4□□□□□ -0.59
LINC00339-207ENST00000634712 KLK5Q9Y337 293 aaPredicted RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms