RNA–Protein interactions for RNA: ENST00000634435.1

SMARCA2-223, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-223	ENST00000634435	SERPINE2	P07093	398 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	TRAPPC2	P0DI81	140 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	TRAPPC2B	P0DI82	140 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	RBMY1A1	P0DJD3	496 aa	Known RBP	4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	RBMY1C	P0DJD4	496 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	GNG2	P59768	71 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	RAB11A	P62491	216 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	FABP5	Q01469	135 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	RBMY1F	Q15415	496 aa	Known RBP	4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	CDNF	Q49AH0	187 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	SOHLH1	Q5JUK2	328 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	AADACL3	Q5VUY0	350 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	HACD4	Q5VWC8	232 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	ZNF773	Q6PK81	442 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	ZNF767P	Q75MW2	155 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	TCF24	Q7RTU0	167 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	UBE2DNL	Q8IWF7	75 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	OR1L8	Q8NGR8	309 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	ENKUR	Q8TC29	256 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	LINC00479	Q96M42	142 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	C9orf85	Q96MD7	179 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	GINS3	Q9BRX5	216 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	CCDC90B	Q9GZT6	254 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	ACOT13	Q9NPJ3	140 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	CCL28	Q9NRJ3	127 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	SCN3B	Q9NY72	215 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	RABAC1	Q9UI14	185 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	ANXA10	Q9UJ72	324 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	VPS13D	Q5THJ4	4388 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	DNAH11	Q96DT5	4516 aa		4.6	□□□□□ -1.67
SMARCA2-223	ENST00000634435	IGHV3-66	A0A0C4DH42	116 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	NDUFS6	O75380	124 aa	Known RBP	4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	SCGN	O76038	276 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	IFNA10	P01566	189 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	IGKV3-20	P01619	116 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	CD5	P06127	495 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	CTSG	P08311	255 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	CBX5	P45973	191 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	FXYD4	P59646	89 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	POLR2G	P62487	172 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	FGL1	Q08830	312 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	MLLT11	Q13015	90 aa	Predicted RBP	4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	MSMO1	Q15800	293 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	POU2AF1	Q16633	256 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	LGALS9B	Q3B8N2	356 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	STXBP6	Q8NFX7	210 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	SLC25A46	Q96AG3	418 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	OR10C1	Q96KK4	312 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	MS4A6A	Q9H2W1	248 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	VCX	Q9H320	206 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	CLEC5A	Q9NY25	188 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	COMMD9	Q9P000	198 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	CELA1	Q9UNI1	258 aa		4.59	□□□□□ -1.67
SMARCA2-223	ENST00000634435	DNAH6	Q9C0G6	4158 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	TRAV26-1	A0A087WT03	109 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	TRAV2	A0A0B4J234	112 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	TEX50	A0A1B0GTY4	177 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	KNCN	A6PVL3	124 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	C16orf90	A8MZG2	172 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	GNG7	O60262	68 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	PPY	P01298	95 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	IFNA21	P01568	189 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	IFNA17	P01571	189 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	GIG44	P09565	113 aa	Predicted RBP	4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	RAB3B	P20337	219 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	HSPA13	P48723	471 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	C12orf74	Q32Q52	190 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	CNPY1	Q3B7I2	92 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	ZC2HC1B	Q5TFG8	222 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	MORN3	Q6PF18	240 aa	Predicted RBP	4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	ZNF818P	Q6ZRF7	136 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	PRSS48	Q7RTY5	328 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	AKAP14	Q86UN6	197 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	FAM24B	Q8N5W8	94 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	OR1P1	Q8NH06	330 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	DGCR14	Q96DF8	476 aa	Known RBP	4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	ZNF414	Q96IQ9	312 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	TMEM56	Q96MV1	263 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	MGLL	Q99685	303 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	SCRT1	Q9BWW7	348 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	NXF2	Q9GZY0	626 aa	Known RBP	4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	NDUFA4L2	Q9NRX3	87 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	TMEM14B	Q9NUH8	114 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	EHF	Q9NZC4	300 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	OR51B2	Q9Y5P1	312 aa		4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	DMBT1	Q9UGM3	2413 aa	Predicted RBP	4.58	□□□□□ -1.68
SMARCA2-223	ENST00000634435	FAT2	Q9NYQ8	4349 aa		4.57	□□□□□ -1.68
SMARCA2-223	ENST00000634435	TRAV1-2	A0A0B4J238	106 aa		4.57	□□□□□ -1.68
SMARCA2-223	ENST00000634435	NDUFAF8	A1L188	74 aa		4.57	□□□□□ -1.68
SMARCA2-223	ENST00000634435	RPL37AP8	A6NKH3	93 aa		4.57	□□□□□ -1.68
SMARCA2-223	ENST00000634435	SNAPC5	O75971	98 aa		4.57	□□□□□ -1.68
SMARCA2-223	ENST00000634435	MT-CO2	P00403	227 aa		4.57	□□□□□ -1.68
SMARCA2-223	ENST00000634435	KRAS	P01116	189 aa		4.57	□□□□□ -1.68
SMARCA2-223	ENST00000634435	IGHV3-48	P01763	117 aa		4.57	□□□□□ -1.68
SMARCA2-223	ENST00000634435	ZNF688	P0C7X2	276 aa		4.57	□□□□□ -1.68
SMARCA2-223	ENST00000634435	PTHLH	P12272	177 aa		4.57	□□□□□ -1.68
SMARCA2-223	ENST00000634435	NPY1R	P25929	384 aa		4.57	□□□□□ -1.68
SMARCA2-223	ENST00000634435	RND3	P61587	244 aa		4.57	□□□□□ -1.68
SMARCA2-223	ENST00000634435	ZNF506	Q5JVG8	444 aa		4.57	□□□□□ -1.68

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