RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 FAM222AQ5U5X8 452 aa8.87□□□□□ -0.99
SOX2-OT-247ENST00000628347 TMEM182Q6ZP80 229 aaPredicted RBP8.87□□□□□ -0.99
SOX2-OT-247ENST00000628347 TMEM144Q7Z5S9 345 aa8.87□□□□□ -0.99
SOX2-OT-247ENST00000628347 IGF2BP2-AS1Q96M15 143 aa8.87□□□□□ -0.99
SOX2-OT-247ENST00000628347 RSG1Q9BU20 258 aa8.87□□□□□ -0.99
SOX2-OT-247ENST00000628347 TMEM147Q9BVK8 224 aa8.87□□□□□ -0.99
SOX2-OT-247ENST00000628347 SLC25A22Q9H936 323 aa8.87□□□□□ -0.99
SOX2-OT-247ENST00000628347 LOC102723971A0A1B0GUV8 181 aa8.86□□□□□ -0.99
SOX2-OT-247ENST00000628347 C9orf170A2RU37 121 aa8.86□□□□□ -0.99
SOX2-OT-247ENST00000628347 H3BRN7 92 aa8.86□□□□□ -0.99
SOX2-OT-247ENST00000628347 ORM2P19652 201 aa8.86□□□□□ -0.99
SOX2-OT-247ENST00000628347 GATA2P23769 480 aaPredicted RBP8.86□□□□□ -0.99
SOX2-OT-247ENST00000628347 AKR1C1Q04828 323 aa8.86□□□□□ -0.99
SOX2-OT-247ENST00000628347 RRN3P1Q2M238 152 aa8.86□□□□□ -0.99
SOX2-OT-247ENST00000628347 GSG1LQ6UXU4 331 aa8.86□□□□□ -0.99
SOX2-OT-247ENST00000628347 ACOT7LQ6ZUV0 252 aa8.86□□□□□ -0.99
SOX2-OT-247ENST00000628347 C7orf50Q9BRJ6 194 aaKnown RBP8.86□□□□□ -0.99
SOX2-OT-247ENST00000628347 TRAV8-2A0A0B4J237 113 aa8.85□□□□□ -0.99
SOX2-OT-247ENST00000628347 NAP1L6A6NFF2 107 aa8.85□□□□□ -0.99
SOX2-OT-247ENST00000628347 PMS2P5A8MQ11 134 aa8.85□□□□□ -0.99
SOX2-OT-247ENST00000628347 H3BP45 60 aa8.85□□□□□ -0.99
SOX2-OT-247ENST00000628347 DUSP14O95147 198 aaKnown RBP8.85□□□□□ -0.99
SOX2-OT-247ENST00000628347 PLP1P60201 277 aa8.85□□□□□ -0.99
SOX2-OT-247ENST00000628347 CYP2G1PQ6ZSU1 146 aa8.85□□□□□ -0.99
SOX2-OT-247ENST00000628347 SHANK2-AS3Q9BTD1 123 aa8.85□□□□□ -0.99
SOX2-OT-247ENST00000628347 SLC25A39Q9BZJ4 359 aaPredicted RBP8.85□□□□□ -0.99
SOX2-OT-247ENST00000628347 SRRQ9GZT4 340 aa8.85□□□□□ -0.99
SOX2-OT-247ENST00000628347 YTHDF2Q9Y5A9 579 aaKnown RBP8.85□□□□□ -0.99
SOX2-OT-247ENST00000628347 RYR1P21817 5038 aa8.85□□□□□ -0.99
SOX2-OT-247ENST00000628347 FNDC10F2Z333 226 aa8.84□□□□□ -0.99
SOX2-OT-247ENST00000628347 RTL8CO15255 209 aa8.84□□□□□ -0.99
SOX2-OT-247ENST00000628347 CRXO43186 299 aaPredicted RBP8.84□□□□□ -0.99
SOX2-OT-247ENST00000628347 ADAP1O75689 374 aa8.84□□□□□ -0.99
SOX2-OT-247ENST00000628347 NDUFB6O95139 128 aa8.84□□□□□ -0.99
SOX2-OT-247ENST00000628347 IFNA21P01568 189 aa8.84□□□□□ -0.99
SOX2-OT-247ENST00000628347 CNN1P51911 297 aaKnown RBP8.84□□□□□ -0.99
SOX2-OT-247ENST00000628347 B2MP61769 119 aa8.84□□□□□ -0.99
SOX2-OT-247ENST00000628347 SELENOTP62341 195 aa8.84□□□□□ -0.99
SOX2-OT-247ENST00000628347 POLR2GP62487 172 aaKnown RBP eCLIP8.84□□□□□ -0.99
SOX2-OT-247ENST00000628347 RNF212Q495C1 297 aa8.84□□□□□ -0.99
SOX2-OT-247ENST00000628347 SPANXN2Q5MJ10 180 aa8.84□□□□□ -0.99
SOX2-OT-247ENST00000628347 OR11H7Q8NGC8 314 aa8.84□□□□□ -0.99
SOX2-OT-247ENST00000628347 SMIM8Q96KF7 97 aa8.84□□□□□ -0.99
SOX2-OT-247ENST00000628347 RBM38Q9H0Z9 239 aaKnown RBP8.84□□□□□ -0.99
SOX2-OT-247ENST00000628347 PSENENQ9NZ42 101 aa8.84□□□□□ -0.99
SOX2-OT-247ENST00000628347 HIGD1AQ9Y241 93 aa8.84□□□□□ -0.99
SOX2-OT-247ENST00000628347 A0A087X0K7 114 aa8.83□□□□□ -1
SOX2-OT-247ENST00000628347 LYRM9A8MSI8 78 aa8.83□□□□□ -1
SOX2-OT-247ENST00000628347 K7EPK0 472 aa8.83□□□□□ -1
SOX2-OT-247ENST00000628347 ZNF701M0R085 212 aaPredicted RBP8.83□□□□□ -1
SOX2-OT-247ENST00000628347 INSP01308 110 aa8.83□□□□□ -1
SOX2-OT-247ENST00000628347 IL5P05113 134 aa8.83□□□□□ -1
SOX2-OT-247ENST00000628347 RPL7P18124 248 aaKnown RBP8.83□□□□□ -1
SOX2-OT-247ENST00000628347 TSPOP30536 169 aa8.83□□□□□ -1
SOX2-OT-247ENST00000628347 RAP2BP61225 183 aa8.83□□□□□ -1
SOX2-OT-247ENST00000628347 DAD1P61803 113 aa8.83□□□□□ -1
SOX2-OT-247ENST00000628347 DLK1P80370 383 aa8.83□□□□□ -1
SOX2-OT-247ENST00000628347 TMEM14EPQ6UXP3 125 aa8.83□□□□□ -1
SOX2-OT-247ENST00000628347 Q6ZR54 194 aa8.83□□□□□ -1
SOX2-OT-247ENST00000628347 S100A7AQ86SG5 101 aa8.83□□□□□ -1
SOX2-OT-247ENST00000628347 LRP1BQ9NZR2 4599 aa8.82□□□□□ -1
SOX2-OT-247ENST00000628347 SMCO3A2RU48 225 aa8.82□□□□□ -1
SOX2-OT-247ENST00000628347 CCDC160A6NGH7 325 aa8.82□□□□□ -1
SOX2-OT-247ENST00000628347 PRSS29PA6NIE9 313 aa8.82□□□□□ -1
SOX2-OT-247ENST00000628347 HYPMO75409 117 aa8.82□□□□□ -1
SOX2-OT-247ENST00000628347 OR4E1P0C645 316 aa8.82□□□□□ -1
SOX2-OT-247ENST00000628347 LINC00869P0C866 280 aa8.82□□□□□ -1
SOX2-OT-247ENST00000628347 BAK1Q16611 211 aa8.82□□□□□ -1
SOX2-OT-247ENST00000628347 UBE2DNLQ8IWF7 75 aa8.82□□□□□ -1
SOX2-OT-247ENST00000628347 C15orf53Q8NAA6 179 aa8.82□□□□□ -1
SOX2-OT-247ENST00000628347 TMEM208Q9BTX3 173 aa8.82□□□□□ -1
SOX2-OT-247ENST00000628347 NPVFQ9HCQ7 196 aa8.82□□□□□ -1
SOX2-OT-247ENST00000628347 NACAE9PAV3 2078 aa8.82□□□□□ -1
SOX2-OT-247ENST00000628347 PCLOQ9Y6V0 5065 aa8.81□□□□□ -1
SOX2-OT-247ENST00000628347 M0R2N4 97 aa8.81□□□□□ -1
SOX2-OT-247ENST00000628347 M0R2Z0 102 aa8.81□□□□□ -1
SOX2-OT-247ENST00000628347 SSSCA1O60232 199 aa8.81□□□□□ -1
SOX2-OT-247ENST00000628347 INPP1P49441 399 aa8.81□□□□□ -1
SOX2-OT-247ENST00000628347 TAS2R30P59541 319 aa8.81□□□□□ -1
SOX2-OT-247ENST00000628347 SPINK13Q1W4C9 94 aa8.81□□□□□ -1
SOX2-OT-247ENST00000628347 PXDC1Q5TGL8 231 aa8.81□□□□□ -1
SOX2-OT-247ENST00000628347 TRIQKQ629K1 86 aa8.81□□□□□ -1
SOX2-OT-247ENST00000628347 IGFL4Q6B9Z1 124 aa8.81□□□□□ -1
SOX2-OT-247ENST00000628347 TMEM88Q6PEY1 159 aa8.81□□□□□ -1
SOX2-OT-247ENST00000628347 RNF182Q8N6D2 247 aa8.81□□□□□ -1
SOX2-OT-247ENST00000628347 FLVCR2Q9UPI3 526 aa8.81□□□□□ -1
SOX2-OT-247ENST00000628347 RNF24Q9Y225 148 aa8.81□□□□□ -1
SOX2-OT-247ENST00000628347 ZNF705GA8MUZ8 300 aaPredicted RBP8.8□□□□□ -1
SOX2-OT-247ENST00000628347 BOLA2-SMG1P6H3BVE0 249 aa8.8□□□□□ -1
SOX2-OT-247ENST00000628347 MRPS12O15235 138 aaKnown RBP8.8□□□□□ -1
SOX2-OT-247ENST00000628347 TSC22D2O75157 780 aa8.8□□□□□ -1
SOX2-OT-247ENST00000628347 CCNKO75909 580 aa8.8□□□□□ -1
SOX2-OT-247ENST00000628347 HTN3P15516 51 aa8.8□□□□□ -1
SOX2-OT-247ENST00000628347 CXCL2P19875 107 aa8.8□□□□□ -1
SOX2-OT-247ENST00000628347 CXCL3P19876 107 aa8.8□□□□□ -1
SOX2-OT-247ENST00000628347 BTCP35070 178 aa8.8□□□□□ -1
SOX2-OT-247ENST00000628347 FAM3BP58499 235 aaPredicted RBP8.8□□□□□ -1
SOX2-OT-247ENST00000628347 FGL1Q08830 312 aa8.8□□□□□ -1
SOX2-OT-247ENST00000628347 PSG3Q16557 428 aa8.8□□□□□ -1
SOX2-OT-247ENST00000628347 CNPY1Q3B7I2 92 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms