RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 GALR1P47211 349 aa11.02□□□□□ -0.65
PNKP-221ENST00000627317 CD81P60033 236 aa11.02□□□□□ -0.65
PNKP-221ENST00000627317 FFAR4Q5NUL3 377 aa11.02□□□□□ -0.65
PNKP-221ENST00000627317 RPL7L1Q6DKI1 246 aaKnown RBP11.02□□□□□ -0.65
PNKP-221ENST00000627317 WFDC3Q8IUB2 231 aa11.02□□□□□ -0.65
PNKP-221ENST00000627317 TMEM37Q8WXS4 190 aa11.02□□□□□ -0.65
PNKP-221ENST00000627317 GPR82Q96P67 336 aa11.02□□□□□ -0.65
PNKP-221ENST00000627317 ARPC5LQ9BPX5 153 aa11.02□□□□□ -0.65
PNKP-221ENST00000627317 SLC25A32Q9H2D1 315 aa11.02□□□□□ -0.65
PNKP-221ENST00000627317 MS4A6AQ9H2W1 248 aa11.02□□□□□ -0.65
PNKP-221ENST00000627317 KANTRA0A1W2PQU2 76 aa11.01□□□□□ -0.65
PNKP-221ENST00000627317 PFDN1O60925 122 aa11.01□□□□□ -0.65
PNKP-221ENST00000627317 CXCL2P19875 107 aa11.01□□□□□ -0.65
PNKP-221ENST00000627317 ZFP69Q49AA0 526 aa11.01□□□□□ -0.65
PNKP-221ENST00000627317 GATAD1Q8WUU5 269 aa11.01□□□□□ -0.65
PNKP-221ENST00000627317 TIMM9Q9Y5J7 89 aa11.01□□□□□ -0.65
PNKP-221ENST00000627317 TRAV2A0A0B4J234 112 aa11□□□□□ -0.65
PNKP-221ENST00000627317 BCL2L11O43521 198 aa11□□□□□ -0.65
PNKP-221ENST00000627317 JTBO76095 146 aa11□□□□□ -0.65
PNKP-221ENST00000627317 CD7P09564 240 aa11□□□□□ -0.65
PNKP-221ENST00000627317 RPL7P18124 248 aaKnown RBP11□□□□□ -0.65
PNKP-221ENST00000627317 ATP6V0CP27449 155 aa11□□□□□ -0.65
PNKP-221ENST00000627317 CD300CQ08708 224 aa11□□□□□ -0.65
PNKP-221ENST00000627317 GCSAMLQ5JQS6 135 aa11□□□□□ -0.65
PNKP-221ENST00000627317 GNPNAT1Q96EK6 184 aaPredicted RBP11□□□□□ -0.65
PNKP-221ENST00000627317 HYLS1Q96M11 299 aa11□□□□□ -0.65
PNKP-221ENST00000627317 NRN1Q9NPD7 142 aa11□□□□□ -0.65
PNKP-221ENST00000627317 ATF4P18848 351 aaPredicted RBP10.99□□□□□ -0.65
PNKP-221ENST00000627317 ACOT6Q3I5F7 207 aaPredicted RBP10.99□□□□□ -0.65
PNKP-221ENST00000627317 FAM78BQ5VT40 261 aa10.99□□□□□ -0.65
PNKP-221ENST00000627317 TMUB2Q71RG4 321 aa10.99□□□□□ -0.65
PNKP-221ENST00000627317 PSMG3Q9BT73 122 aaPredicted RBP10.99□□□□□ -0.65
PNKP-221ENST00000627317 RFNGQ9Y644 331 aa10.99□□□□□ -0.65
PNKP-221ENST00000627317 K7EQG2 157 aa10.98□□□□□ -0.65
PNKP-221ENST00000627317 MEOX2P50222 304 aa10.98□□□□□ -0.65
PNKP-221ENST00000627317 MORN5Q5VZ52 161 aa10.98□□□□□ -0.65
PNKP-221ENST00000627317 BPIFA4PQ86YQ2 179 aa10.98□□□□□ -0.65
PNKP-221ENST00000627317 Q8N1Y9 231 aa10.98□□□□□ -0.65
PNKP-221ENST00000627317 ZNF471Q9BX82 626 aaPredicted RBP10.98□□□□□ -0.65
PNKP-221ENST00000627317 MRPL32Q9BYC8 188 aaKnown RBP10.98□□□□□ -0.65
PNKP-221ENST00000627317 SH3BGRL3Q9H299 93 aa10.98□□□□□ -0.65
PNKP-221ENST00000627317 CYTL1Q9NRR1 136 aa10.98□□□□□ -0.65
PNKP-221ENST00000627317 SMAD5-AS1Q9Y6J3 95 aa10.98□□□□□ -0.65
PNKP-221ENST00000627317 OR11H12B2RN74 326 aa10.97□□□□□ -0.65
PNKP-221ENST00000627317 M6PRP20645 277 aa10.97□□□□□ -0.65
PNKP-221ENST00000627317 CMC4P56277 68 aaPredicted RBP10.97□□□□□ -0.65
PNKP-221ENST00000627317 RHOBP62745 196 aa10.97□□□□□ -0.65
PNKP-221ENST00000627317 SAMD13Q5VXD3 122 aa10.97□□□□□ -0.65
PNKP-221ENST00000627317 OR2G3Q8NGZ4 309 aa10.97□□□□□ -0.65
PNKP-221ENST00000627317 DCANP1Q8TF63 244 aa10.97□□□□□ -0.65
PNKP-221ENST00000627317 WFDC10AQ9H1F0 79 aa10.97□□□□□ -0.65
PNKP-221ENST00000627317 UBQLN2Q9UHD9 624 aa10.97□□□□□ -0.65
PNKP-221ENST00000627317 HUWE1Q7Z6Z7 4374 aaKnown RBP10.96□□□□□ -0.65
PNKP-221ENST00000627317 TRAV5A0A0B4J249 113 aa10.96□□□□□ -0.65
PNKP-221ENST00000627317 ZNF688P0C7X2 276 aa10.96□□□□□ -0.65
PNKP-221ENST00000627317 NHLRC4P0CG21 123 aaPredicted RBP10.96□□□□□ -0.65
PNKP-221ENST00000627317 RAB2AP61019 212 aa10.96□□□□□ -0.65
PNKP-221ENST00000627317 SNRPD3P62318 126 aaKnown RBP10.96□□□□□ -0.65
PNKP-221ENST00000627317 EIF5AP63241 154 aaKnown RBP10.96□□□□□ -0.65
PNKP-221ENST00000627317 SERF2P84101 59 aa10.96□□□□□ -0.65
PNKP-221ENST00000627317 ODF3L2Q3SX64 289 aa10.96□□□□□ -0.65
PNKP-221ENST00000627317 SPATA31B1PQ5VZV4 182 aa10.96□□□□□ -0.65
PNKP-221ENST00000627317 MIR17HGQ75NE6 70 aa10.96□□□□□ -0.65
PNKP-221ENST00000627317 FAM24BQ8N5W8 94 aa10.96□□□□□ -0.65
PNKP-221ENST00000627317 TUBA4BQ9H853 241 aa10.96□□□□□ -0.65
PNKP-221ENST00000627317 SEPSECSQ9HD40 501 aaKnown RBP10.96□□□□□ -0.65
PNKP-221ENST00000627317 FUT9Q9Y231 359 aa10.96□□□□□ -0.65
PNKP-221ENST00000627317 A0A087X0K7 114 aa10.95□□□□□ -0.66
PNKP-221ENST00000627317 A0A1W2PPV4 95 aa10.95□□□□□ -0.66
PNKP-221ENST00000627317 MBP02144 154 aa10.95□□□□□ -0.66
PNKP-221ENST00000627317 C4BPBP20851 252 aa10.95□□□□□ -0.66
PNKP-221ENST00000627317 ID1P41134 155 aa10.95□□□□□ -0.66
PNKP-221ENST00000627317 LGALSLQ3ZCW2 172 aaPredicted RBP10.95□□□□□ -0.66
PNKP-221ENST00000627317 FAM122CQ6P4D5 195 aa10.95□□□□□ -0.66
PNKP-221ENST00000627317 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.95□□□□□ -0.66
PNKP-221ENST00000627317 DEFB125Q8N687 156 aa10.95□□□□□ -0.66
PNKP-221ENST00000627317 OR10G4Q8NGN3 311 aa10.95□□□□□ -0.66
PNKP-221ENST00000627317 OR10G9Q8NGN4 311 aa10.95□□□□□ -0.66
PNKP-221ENST00000627317 OR10G7Q8NGN6 311 aa10.95□□□□□ -0.66
PNKP-221ENST00000627317 C16orf92Q96LL3 132 aa10.95□□□□□ -0.66
PNKP-221ENST00000627317 FAM110AQ9BQ89 295 aa10.95□□□□□ -0.66
PNKP-221ENST00000627317 MAP6D1Q9H9H5 199 aa10.95□□□□□ -0.66
PNKP-221ENST00000627317 KMT2CQ8NEZ4 4911 aaKnown RBP10.95□□□□□ -0.66
PNKP-221ENST00000627317 MRPS12O15235 138 aaKnown RBP10.94□□□□□ -0.66
PNKP-221ENST00000627317 FRMD6-AS1P0C7T7 363 aa10.94□□□□□ -0.66
PNKP-221ENST00000627317 IGHV4-30-4P0DP06 118 aa10.94□□□□□ -0.66
PNKP-221ENST00000627317 PSMB3P49720 205 aa10.94□□□□□ -0.66
PNKP-221ENST00000627317 TAS2R45P59539 299 aa10.94□□□□□ -0.66
PNKP-221ENST00000627317 DEFB131AP59861 70 aa10.94□□□□□ -0.66
PNKP-221ENST00000627317 TMEM41BQ5BJD5 291 aa10.94□□□□□ -0.66
PNKP-221ENST00000627317 PSMG4Q5JS54 123 aa10.94□□□□□ -0.66
PNKP-221ENST00000627317 AKR1C8PQ5T2L2 129 aa10.94□□□□□ -0.66
PNKP-221ENST00000627317 LRRC20Q8TCA0 184 aa10.94□□□□□ -0.66
PNKP-221ENST00000627317 SLC25A2Q9BXI2 301 aa10.94□□□□□ -0.66
PNKP-221ENST00000627317 SRD5A3Q9H8P0 318 aa10.94□□□□□ -0.66
PNKP-221ENST00000627317 C19orf73Q9NVV2 129 aa10.94□□□□□ -0.66
PNKP-221ENST00000627317 A8MZ25 164 aa10.93□□□□□ -0.66
PNKP-221ENST00000627317 ISLRO14498 428 aa10.93□□□□□ -0.66
PNKP-221ENST00000627317 SOCS3O14543 225 aa10.93□□□□□ -0.66
PNKP-221ENST00000627317 OR7C2O60412 319 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms