RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 MORN5Q5VZ52 161 aa6.44□□□□□ -1.38
SGMS1-211ENST00000626236 FAM122CQ6P4D5 195 aa6.44□□□□□ -1.38
SGMS1-211ENST00000626236 C16orf54Q6UWD8 224 aa6.44□□□□□ -1.38
SGMS1-211ENST00000626236 GATAD1Q8WUU5 269 aa6.44□□□□□ -1.38
SGMS1-211ENST00000626236 TMED6Q8WW62 240 aa6.44□□□□□ -1.38
SGMS1-211ENST00000626236 RNF2Q99496 336 aa6.44□□□□□ -1.38
SGMS1-211ENST00000626236 SHANK2-AS3Q9BTD1 123 aa6.44□□□□□ -1.38
SGMS1-211ENST00000626236 SEPSECSQ9HD40 501 aaKnown RBP6.44□□□□□ -1.38
SGMS1-211ENST00000626236 SIGLEC8Q9NYZ4 499 aa6.44□□□□□ -1.38
SGMS1-211ENST00000626236 TECRQ9NZ01 308 aaKnown RBP6.44□□□□□ -1.38
SGMS1-211ENST00000626236 U3KQE9 123 aa6.44□□□□□ -1.38
SGMS1-211ENST00000626236 IGKV3-7A0A075B6H7 116 aa6.43□□□□□ -1.38
SGMS1-211ENST00000626236 TRAV5A0A0B4J249 113 aa6.43□□□□□ -1.38
SGMS1-211ENST00000626236 A0A1W2PPV4 95 aa6.43□□□□□ -1.38
SGMS1-211ENST00000626236 INSL3P51460 131 aa6.43□□□□□ -1.38
SGMS1-211ENST00000626236 RHOBP62745 196 aa6.43□□□□□ -1.38
SGMS1-211ENST00000626236 RPL11P62913 178 aaKnown RBP6.43□□□□□ -1.38
SGMS1-211ENST00000626236 DEFB114Q30KQ6 69 aa6.43□□□□□ -1.38
SGMS1-211ENST00000626236 CD300EQ496F6 205 aaPredicted RBP6.43□□□□□ -1.38
SGMS1-211ENST00000626236 C1orf194Q5T5A4 169 aa6.43□□□□□ -1.38
SGMS1-211ENST00000626236 SPATA31B1PQ5VZV4 182 aa6.43□□□□□ -1.38
SGMS1-211ENST00000626236 EIF5AL1Q6IS14 154 aaKnown RBP6.43□□□□□ -1.38
SGMS1-211ENST00000626236 SIGLEC15Q6ZMC9 328 aa6.43□□□□□ -1.38
SGMS1-211ENST00000626236 RBPMS2Q6ZRY4 209 aaKnown RBP6.43□□□□□ -1.38
SGMS1-211ENST00000626236 MIR17HGQ75NE6 70 aa6.43□□□□□ -1.38
SGMS1-211ENST00000626236 TCF24Q7RTU0 167 aa6.43□□□□□ -1.38
SGMS1-211ENST00000626236 OR8I2Q8N0Y5 310 aa6.43□□□□□ -1.38
SGMS1-211ENST00000626236 MRPL32Q9BYC8 188 aaKnown RBP6.43□□□□□ -1.38
SGMS1-211ENST00000626236 FUT9Q9Y231 359 aa6.43□□□□□ -1.38
SGMS1-211ENST00000626236 IZUMO1RA6ND01 250 aa6.42□□□□□ -1.38
SGMS1-211ENST00000626236 HELTA6NFD8 242 aa6.42□□□□□ -1.38
SGMS1-211ENST00000626236 HMGB3O15347 200 aaKnown RBP6.42□□□□□ -1.38
SGMS1-211ENST00000626236 EIF3GO75821 320 aaKnown RBP eCLIP6.42□□□□□ -1.38
SGMS1-211ENST00000626236 IGLV1-51P01701 117 aa6.42□□□□□ -1.38
SGMS1-211ENST00000626236 CDC34P49427 236 aaPredicted RBP6.42□□□□□ -1.38
SGMS1-211ENST00000626236 TMEM61Q8N0U2 210 aa6.42□□□□□ -1.38
SGMS1-211ENST00000626236 RPP25LQ8N5L8 163 aaKnown RBP6.42□□□□□ -1.38
SGMS1-211ENST00000626236 GLMPQ8WWB7 406 aa6.42□□□□□ -1.38
SGMS1-211ENST00000626236 SLC25A2Q9BXI2 301 aa6.42□□□□□ -1.38
SGMS1-211ENST00000626236 GPR61Q9BZJ8 451 aa6.42□□□□□ -1.38
SGMS1-211ENST00000626236 ACTR3CQ9C0K3 210 aaPredicted RBP6.42□□□□□ -1.38
SGMS1-211ENST00000626236 RPRMQ9NS64 109 aa6.42□□□□□ -1.38
SGMS1-211ENST00000626236 RNF24Q9Y225 148 aa6.42□□□□□ -1.38
SGMS1-211ENST00000626236 UMAD1C9J7I0 102 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 G3V4G9 280 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 CD5P06127 495 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 SNRPCP09234 159 aaKnown RBP6.41□□□□□ -1.38
SGMS1-211ENST00000626236 RPL7P18124 248 aaKnown RBP6.41□□□□□ -1.38
SGMS1-211ENST00000626236 ATF4P18848 351 aaPredicted RBP6.41□□□□□ -1.38
SGMS1-211ENST00000626236 GALR1P47211 349 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 TFPI2P48307 235 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 TAS2R45P59539 299 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 GUCA2BQ16661 112 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 KHDC3LQ587J8 217 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 FAM74A1Q5RGS3 127 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 LCN12Q6JVE5 192 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 ALKAL2Q6UX46 152 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 SSX7Q7RTT5 188 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 BPIFA4PQ86YQ2 179 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 GBGT1Q8N5D6 347 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 STXBP6Q8NFX7 210 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 OR2K2Q8NGT1 345 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 FAM213BQ8TBF2 198 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 PHYHIPLQ96FC7 376 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 GPR82Q96P67 336 aa6.41□□□□□ -1.38
SGMS1-211ENST00000626236 TRAV25A0A0B4J276 109 aa6.4□□□□□ -1.38
SGMS1-211ENST00000626236 CTXND1A0A1B0GTU2 59 aa6.4□□□□□ -1.38
SGMS1-211ENST00000626236 ZNF785A8K8V0 405 aa6.4□□□□□ -1.38
SGMS1-211ENST00000626236 DNASE2O00115 360 aaPredicted RBP6.4□□□□□ -1.38
SGMS1-211ENST00000626236 TSPAN4O14817 238 aa6.4□□□□□ -1.38
SGMS1-211ENST00000626236 OR7C2O60412 319 aa6.4□□□□□ -1.38
SGMS1-211ENST00000626236 PYYP10082 97 aa6.4□□□□□ -1.38
SGMS1-211ENST00000626236 GP9P14770 177 aa6.4□□□□□ -1.38
SGMS1-211ENST00000626236 FHITP49789 147 aa6.4□□□□□ -1.38
SGMS1-211ENST00000626236 PAFAH1B2P68402 229 aa6.4□□□□□ -1.38
SGMS1-211ENST00000626236 ZNF726P1Q15940 193 aa6.4□□□□□ -1.38
SGMS1-211ENST00000626236 FAM90A2PQ658T7 463 aa6.4□□□□□ -1.38
SGMS1-211ENST00000626236 DPPA3Q6W0C5 159 aa6.4□□□□□ -1.38
SGMS1-211ENST00000626236 WFDC3Q8IUB2 231 aa6.4□□□□□ -1.38
SGMS1-211ENST00000626236 RAB24Q969Q5 203 aa6.4□□□□□ -1.38
SGMS1-211ENST00000626236 FAM167A-AS1Q96KT0 104 aa6.4□□□□□ -1.38
SGMS1-211ENST00000626236 PAXXQ9BUH6 204 aa6.4□□□□□ -1.38
SGMS1-211ENST00000626236 MS4A6AQ9H2W1 248 aa6.4□□□□□ -1.38
SGMS1-211ENST00000626236 SMAD5-AS1Q9Y6J3 95 aa6.4□□□□□ -1.38
SGMS1-211ENST00000626236 H3BTX0 84 aa6.39□□□□□ -1.39
SGMS1-211ENST00000626236 MRPS12O15235 138 aaKnown RBP6.39□□□□□ -1.39
SGMS1-211ENST00000626236 OR10J4P0C629 311 aa6.39□□□□□ -1.39
SGMS1-211ENST00000626236 STAG3L2P0CL84 134 aa6.39□□□□□ -1.39
SGMS1-211ENST00000626236 STAG3L3P0CL85 134 aa6.39□□□□□ -1.39
SGMS1-211ENST00000626236 ARL14EPLP0DKL9 152 aa6.39□□□□□ -1.39
SGMS1-211ENST00000626236 IGLC2P0DOY2 106 aa6.39□□□□□ -1.39
SGMS1-211ENST00000626236 SULT1A2P50226 295 aa6.39□□□□□ -1.39
SGMS1-211ENST00000626236 RAB5CP51148 216 aa6.39□□□□□ -1.39
SGMS1-211ENST00000626236 FGF8P55075 233 aaPredicted RBP6.39□□□□□ -1.39
SGMS1-211ENST00000626236 UBE2L3P68036 154 aaKnown RBP6.39□□□□□ -1.39
SGMS1-211ENST00000626236 TEX261Q6UWH6 196 aa6.39□□□□□ -1.39
SGMS1-211ENST00000626236 LCN15Q6UWW0 184 aa6.39□□□□□ -1.39
SGMS1-211ENST00000626236 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.39□□□□□ -1.39
SGMS1-211ENST00000626236 BLNKQ8WV28 456 aa6.39□□□□□ -1.39
SGMS1-211ENST00000626236 ZNF503Q96F45 646 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms