RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 IFITM10A6NMD0 228 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 LINC00473A8K010 186 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 HRASP01112 189 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 IGHV3-43DP0DP04 118 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 MORN2Q502X0 79 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 ZNF788Q6ZQV5 615 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 CD177Q8N6Q3 437 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 ZNF439Q8NDP4 499 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 OR51G1Q8NGK1 321 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 TPSG1Q9NRR2 321 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 U3KQE9 123 aa9.25□□□□□ -0.93
LINC00538-201ENST00000626109 CENPEQ02224 2701 aa9.24□□□□□ -0.93
LINC00538-201ENST00000626109 B5MCH6 92 aa9.24□□□□□ -0.93
LINC00538-201ENST00000626109 C11orf94C9JXX5 98 aa9.24□□□□□ -0.93
LINC00538-201ENST00000626109 TFF1P04155 84 aa9.24□□□□□ -0.93
LINC00538-201ENST00000626109 HTR1DP28221 377 aa9.24□□□□□ -0.93
LINC00538-201ENST00000626109 OR8B3Q8NGG8 313 aa9.24□□□□□ -0.93
LINC00538-201ENST00000626109 OR4X1Q8NH49 305 aa9.24□□□□□ -0.93
LINC00538-201ENST00000626109 C11orf45Q8TAV5 145 aa9.24□□□□□ -0.93
LINC00538-201ENST00000626109 GAFA1Q96PS6 74 aa9.24□□□□□ -0.93
LINC00538-201ENST00000626109 OR8B2Q96RD0 313 aa9.24□□□□□ -0.93
LINC00538-201ENST00000626109 KAAG1Q9UBP8 84 aa9.24□□□□□ -0.93
LINC00538-201ENST00000626109 Q9UF83 564 aa9.24□□□□□ -0.93
LINC00538-201ENST00000626109 APCP25054 2843 aa9.24□□□□□ -0.93
LINC00538-201ENST00000626109 C15orf62A8K5M9 175 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 ZNF207O43670 478 aaKnown RBP9.23□□□□□ -0.93
LINC00538-201ENST00000626109 NDUFB3O43676 98 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 CD99P14209 185 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 OPRK1P41145 380 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 SMAGPQ0VAQ4 97 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 LYPD2Q6UXB3 125 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 KRTAP1-3Q8IUG1 177 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 NAV2Q8IVL1 2488 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 TMEM183AQ8IXX5 376 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 FAM216BQ8N7L0 139 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 RASL10AQ92737 203 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 ACY3Q96HD9 319 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 DNAJC30Q96LL9 226 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 ANKRD17O75179 2603 aaKnown RBP9.23□□□□□ -0.93
LINC00538-201ENST00000626109 A0A087WX48 190 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 IGHV4-61A0A0C4DH41 118 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 M0R1X1 148 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 FABP4P15090 132 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 USF1P22415 310 aaPredicted RBP9.23□□□□□ -0.93
LINC00538-201ENST00000626109 LRRC10Q5BKY1 277 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 OR4A47Q6IF82 309 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 ZNRF1Q8ND25 227 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 OR1L8Q8NGR8 309 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 OR2T10Q8NGZ9 312 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 ZNF502Q8TBZ5 544 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 IDI2-AS1Q9NZ38 188 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 CTSZQ9UBR2 303 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 POLQO75417 2590 aa9.23□□□□□ -0.93
LINC00538-201ENST00000626109 PHOX2AO14813 284 aa9.22□□□□□ -0.93
LINC00538-201ENST00000626109 OR9G9P0C7N8 305 aa9.22□□□□□ -0.93
LINC00538-201ENST00000626109 FAM53AQ6NSI3 398 aaPredicted RBP9.22□□□□□ -0.93
LINC00538-201ENST00000626109 LINC01551Q86U37 167 aa9.22□□□□□ -0.93
LINC00538-201ENST00000626109 VKORC1L1Q8N0U8 176 aa9.22□□□□□ -0.93
LINC00538-201ENST00000626109 TMEM86BQ8N661 226 aa9.22□□□□□ -0.93
LINC00538-201ENST00000626109 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.22□□□□□ -0.93
LINC00538-201ENST00000626109 LINC00477Q96M19 166 aa9.22□□□□□ -0.93
LINC00538-201ENST00000626109 IMMP2LQ96T52 175 aa9.22□□□□□ -0.93
LINC00538-201ENST00000626109 SNHG12Q9BXW3 62 aa9.22□□□□□ -0.93
LINC00538-201ENST00000626109 CST9LQ9H4G1 147 aa9.22□□□□□ -0.93
LINC00538-201ENST00000626109 CCL25O15444 150 aa9.21□□□□□ -0.93
LINC00538-201ENST00000626109 CXorf1O96002 111 aa9.21□□□□□ -0.93
LINC00538-201ENST00000626109 SPINK9Q5DT21 86 aa9.21□□□□□ -0.93
LINC00538-201ENST00000626109 GATD1Q8NB37 220 aa9.21□□□□□ -0.93
LINC00538-201ENST00000626109 WFDC11Q8NEX6 87 aa9.21□□□□□ -0.93
LINC00538-201ENST00000626109 NPVFQ9HCQ7 196 aa9.21□□□□□ -0.93
LINC00538-201ENST00000626109 LOC102724200A0A096LPH7 203 aaPredicted RBP9.21□□□□□ -0.94
LINC00538-201ENST00000626109 SNRPCP09234 159 aaKnown RBP9.21□□□□□ -0.94
LINC00538-201ENST00000626109 EDDM3BP56851 147 aa9.21□□□□□ -0.94
LINC00538-201ENST00000626109 LMO4P61968 165 aa9.21□□□□□ -0.94
LINC00538-201ENST00000626109 GFI1BQ5VTD9 330 aa9.21□□□□□ -0.94
LINC00538-201ENST00000626109 COX8CQ7Z4L0 72 aa9.21□□□□□ -0.94
LINC00538-201ENST00000626109 OR5R1Q8NH85 324 aa9.21□□□□□ -0.94
LINC00538-201ENST00000626109 SSBP3Q9BWW4 388 aaPredicted RBP9.21□□□□□ -0.94
LINC00538-201ENST00000626109 AAMDCQ9H7C9 122 aa9.21□□□□□ -0.94
LINC00538-201ENST00000626109 AURKAIP1Q9NWT8 199 aaPredicted RBP9.21□□□□□ -0.94
LINC00538-201ENST00000626109 A8MWP6 167 aa9.2□□□□□ -0.94
LINC00538-201ENST00000626109 CORTO00230 105 aa9.2□□□□□ -0.94
LINC00538-201ENST00000626109 HOXA3O43365 443 aaPredicted RBP9.2□□□□□ -0.94
LINC00538-201ENST00000626109 REG1AP05451 166 aa9.2□□□□□ -0.94
LINC00538-201ENST00000626109 VDAC2P45880 294 aaPredicted RBP9.2□□□□□ -0.94
LINC00538-201ENST00000626109 SUMO2P61956 95 aaKnown RBP9.2□□□□□ -0.94
LINC00538-201ENST00000626109 LOXL1Q08397 574 aaPredicted RBP9.2□□□□□ -0.94
LINC00538-201ENST00000626109 COA6Q5JTJ3 125 aaKnown RBP9.2□□□□□ -0.94
LINC00538-201ENST00000626109 FAM162BQ5T6X4 162 aa9.2□□□□□ -0.94
LINC00538-201ENST00000626109 TREML4Q6UXN2 200 aa9.2□□□□□ -0.94
LINC00538-201ENST00000626109 FAM231DQ6ZW35 169 aa9.2□□□□□ -0.94
LINC00538-201ENST00000626109 FA2HQ7L5A8 372 aa9.2□□□□□ -0.94
LINC00538-201ENST00000626109 HIST1H2BLQ99880 126 aa9.2□□□□□ -0.94
LINC00538-201ENST00000626109 SLC25A39Q9BZJ4 359 aaPredicted RBP9.2□□□□□ -0.94
LINC00538-201ENST00000626109 MEGF9Q9H1U4 602 aa9.2□□□□□ -0.94
LINC00538-201ENST00000626109 PLA2G2DQ9UNK4 145 aa9.2□□□□□ -0.94
LINC00538-201ENST00000626109 TACC2O95359 2948 aa9.2□□□□□ -0.94
LINC00538-201ENST00000626109 ASH1LQ9NR48 2969 aaKnown RBP9.19□□□□□ -0.94
LINC00538-201ENST00000626109 CRYGDP07320 174 aa9.19□□□□□ -0.94
LINC00538-201ENST00000626109 THBS3P49746 956 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms