RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 AMMECR1Q9Y4X0 333 aaPredicted RBP4.11□□□□□ -1.75
CHD2-204ENST00000625463 A0A1B0GTH9 108 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 H3BMM0 161 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 H3BVH4 76 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 EFNA2O43921 213 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 HERVK_113P61574 105 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 ADIGQ0VDE8 80 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 ZNF816Q0VGE8 651 aaPredicted RBP4.1□□□□□ -1.75
CHD2-204ENST00000625463 DAZ2Q13117 558 aaKnown RBP4.1□□□□□ -1.75
CHD2-204ENST00000625463 CST6Q15828 149 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 RSPO4Q2I0M5 234 aaPredicted RBP4.1□□□□□ -1.75
CHD2-204ENST00000625463 SP6Q3SY56 376 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 TMEM155Q4W5P6 130 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 DEFB121Q5J5C9 76 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 C1orf140Q5VVS0 124 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 PLPP4Q5VZY2 271 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 PCSK4Q6UW60 755 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 LINC00305Q7Z4B0 112 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 DAZ4Q86SG3 579 aaKnown RBP4.1□□□□□ -1.75
CHD2-204ENST00000625463 DEFB106AQ8N104 65 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 Q8N1Y9 231 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 SLC22A24Q8N4F4 322 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 SERP2Q8N6R1 65 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 DCAF4L2Q8NA75 395 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 Q8NA96 180 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 WFDC11Q8NEX6 87 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 C10orf105Q8TEF2 133 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 TMEM190Q8WZ59 177 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 UBE2WQ96B02 151 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 IFI27L1Q96BM0 104 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 GPX7Q96SL4 187 aaPredicted RBP4.1□□□□□ -1.75
CHD2-204ENST00000625463 S1PR3Q99500 378 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 HIST1H4GQ99525 98 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 TRGV9Q99603 122 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 PRSS27Q9BQR3 290 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 ZNF747Q9BV97 191 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 TTTY10Q9BZA0 68 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 FAM60AQ9NP50 221 aa4.1□□□□□ -1.75
CHD2-204ENST00000625463 DAZ1Q9NQZ3 744 aaKnown RBP4.1□□□□□ -1.75
CHD2-204ENST00000625463 DAZ3Q9NR90 486 aaKnown RBP4.1□□□□□ -1.75
CHD2-204ENST00000625463 NUP98P52948 1817 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 PLXNA2O75051 1894 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 MYO16Q9Y6X6 1858 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 PLXNB3Q9ULL4 1909 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 SCN10AQ9Y5Y9 1956 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 TRBV25-1A0A075B6N4 114 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 IGHV3OR15-7A0A075B7D8 119 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 LOC107984156A0A0G2JMH3 177 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 TRBV7-6A0A0J9YX20 115 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 PLAC8L1A1L4L8 177 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 TMEM14DPA8MWL7 114 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 HMGN4O00479 90 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 SYNGR2O43760 224 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 SCRG1O75711 98 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 NXPH3O95157 252 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 IGLV1-40P01703 118 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 CXCL8P10145 99 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 UBE2E1P51965 193 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 ATP5EP56381 51 aaPredicted RBP4.09□□□□□ -1.75
CHD2-204ENST00000625463 PCBD1P61457 104 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 RPL18AQ02543 176 aaKnown RBP4.09□□□□□ -1.75
CHD2-204ENST00000625463 BEAN1Q3B7T3 259 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 SLC48A1Q6P1K1 146 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 ZNF793Q6ZN11 406 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 LINC00173Q6ZV60 143 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 C5orf38Q86SI9 138 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 PCP2Q8IVA1 136 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 ARL17AQ8IVW1 177 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 ODF3L1Q8IXM7 274 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 RPRMLQ8N4K4 120 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 RPP25LQ8N5L8 163 aaKnown RBP4.09□□□□□ -1.75
CHD2-204ENST00000625463 NEXN-AS1Q8NBZ9 246 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 KLHDC9Q8NEP7 349 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 RFESDQ8TAC1 157 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 URB1-AS1Q96HZ7 61 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 UBE2E2Q96LR5 201 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 SRXN1Q9BYN0 137 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 LIME1Q9H400 295 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 C16orf95Q9H693 158 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 SLC25A22Q9H936 323 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 PHPT1Q9NRX4 125 aaPredicted RBP4.09□□□□□ -1.75
CHD2-204ENST00000625463 SSC5DA1L4H1 1573 aa4.09□□□□□ -1.75
CHD2-204ENST00000625463 PTPRBP23467 1997 aa4.09□□□□□ -1.76
CHD2-204ENST00000625463 K7ESM1 405 aa4.08□□□□□ -1.76
CHD2-204ENST00000625463 SRSF10O75494 262 aaKnown RBP4.08□□□□□ -1.76
CHD2-204ENST00000625463 TCRAP04437 139 aa4.08□□□□□ -1.76
CHD2-204ENST00000625463 GP1BBP13224 206 aa4.08□□□□□ -1.76
CHD2-204ENST00000625463 DUTP33316 252 aaKnown RBP4.08□□□□□ -1.76
CHD2-204ENST00000625463 EFNA4P52798 201 aa4.08□□□□□ -1.76
CHD2-204ENST00000625463 APOC4P55056 127 aa4.08□□□□□ -1.76
CHD2-204ENST00000625463 CCL23P55773 120 aa4.08□□□□□ -1.76
CHD2-204ENST00000625463 HIST1H4AP62805 103 aaKnown RBP4.08□□□□□ -1.76
CHD2-204ENST00000625463 RPL18Q07020 188 aaKnown RBP4.08□□□□□ -1.76
CHD2-204ENST00000625463 FOXF2Q12947 444 aa4.08□□□□□ -1.76
CHD2-204ENST00000625463 SRSF9Q13242 221 aaKnown RBP eCLIP4.08□□□□□ -1.76
CHD2-204ENST00000625463 KCTD18Q6PI47 426 aaPredicted RBP4.08□□□□□ -1.76
CHD2-204ENST00000625463 NTN5Q8WTR8 489 aaPredicted RBP4.08□□□□□ -1.76
CHD2-204ENST00000625463 ZNF414Q96IQ9 312 aa4.08□□□□□ -1.76
CHD2-204ENST00000625463 UPK3BQ9BT76 320 aa4.08□□□□□ -1.76
CHD2-204ENST00000625463 RPP25Q9BUL9 199 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms