RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 CCDC59Q9P031 241 aaKnown RBP13.37□□□□□ -0.27
SMN1-211ENST00000625245 SLC45A2Q9UMX9 530 aa13.37□□□□□ -0.27
SMN1-211ENST00000625245 FABP12A6NFH5 140 aa13.36□□□□□ -0.27
SMN1-211ENST00000625245 LYRM9A8MSI8 78 aa13.36□□□□□ -0.27
SMN1-211ENST00000625245 F5H768 121 aa13.36□□□□□ -0.27
SMN1-211ENST00000625245 NUDT3O95989 172 aa13.36□□□□□ -0.27
SMN1-211ENST00000625245 AKR1C1Q04828 323 aa13.36□□□□□ -0.27
SMN1-211ENST00000625245 FCN2Q15485 313 aa13.36□□□□□ -0.27
SMN1-211ENST00000625245 RNF182Q8N6D2 247 aa13.36□□□□□ -0.27
SMN1-211ENST00000625245 OR4D5Q8NGN0 318 aa13.36□□□□□ -0.27
SMN1-211ENST00000625245 DYNC2LI1Q8TCX1 351 aa13.36□□□□□ -0.27
SMN1-211ENST00000625245 GPR82Q96P67 336 aa13.36□□□□□ -0.27
SMN1-211ENST00000625245 CIB3Q96Q77 187 aaPredicted RBP13.36□□□□□ -0.27
SMN1-211ENST00000625245 CRXO43186 299 aaPredicted RBP13.35□□□□□ -0.27
SMN1-211ENST00000625245 SYNGR2O43760 224 aa13.35□□□□□ -0.27
SMN1-211ENST00000625245 S100A7P31151 101 aa13.35□□□□□ -0.27
SMN1-211ENST00000625245 FAUP35544 74 aaKnown RBP13.35□□□□□ -0.27
SMN1-211ENST00000625245 TNP2Q05952 138 aa13.35□□□□□ -0.27
SMN1-211ENST00000625245 TMEM128Q5BJH2 165 aa13.35□□□□□ -0.27
SMN1-211ENST00000625245 SPANXN5Q5MJ07 72 aa13.35□□□□□ -0.27
SMN1-211ENST00000625245 BAP18Q8IXM2 172 aa13.35□□□□□ -0.27
SMN1-211ENST00000625245 ZNF738Q8NE65 137 aa13.35□□□□□ -0.27
SMN1-211ENST00000625245 ABCA13Q86UQ4 5058 aa13.34□□□□□ -0.27
SMN1-211ENST00000625245 TRAV12-2A0A075B6T6 113 aa13.34□□□□□ -0.27
SMN1-211ENST00000625245 TRAV8-2A0A0B4J237 113 aa13.34□□□□□ -0.27
SMN1-211ENST00000625245 C16orf90A8MZG2 172 aa13.34□□□□□ -0.27
SMN1-211ENST00000625245 H3BP45 60 aa13.34□□□□□ -0.27
SMN1-211ENST00000625245 SLC25A6P12236 298 aa13.34□□□□□ -0.27
SMN1-211ENST00000625245 TNFSF8P32971 234 aa13.34□□□□□ -0.27
SMN1-211ENST00000625245 B2MP61769 119 aa13.34□□□□□ -0.27
SMN1-211ENST00000625245 RAB2BQ8WUD1 216 aa13.34□□□□□ -0.27
SMN1-211ENST00000625245 SLC25A39Q9BZJ4 359 aaPredicted RBP13.34□□□□□ -0.27
SMN1-211ENST00000625245 PRSS46E5RG02 174 aa13.33□□□□□ -0.28
SMN1-211ENST00000625245 HOXB5P09067 269 aa13.33□□□□□ -0.28
SMN1-211ENST00000625245 AZU1P20160 251 aa13.33□□□□□ -0.28
SMN1-211ENST00000625245 RHOBP62745 196 aa13.33□□□□□ -0.28
SMN1-211ENST00000625245 LRTM2Q8N967 370 aa13.33□□□□□ -0.28
SMN1-211ENST00000625245 LINC01587Q99440 93 aa13.33□□□□□ -0.28
SMN1-211ENST00000625245 SOSTQ9BQB4 213 aa13.33□□□□□ -0.28
SMN1-211ENST00000625245 PPP1R14DQ9NXH3 145 aa13.33□□□□□ -0.28
SMN1-211ENST00000625245 NBDYA0A0U1RRE5 68 aa13.32□□□□□ -0.28
SMN1-211ENST00000625245 SMCO3A2RU48 225 aa13.32□□□□□ -0.28
SMN1-211ENST00000625245 BOLA2-SMG1P6H3BVE0 249 aa13.32□□□□□ -0.28
SMN1-211ENST00000625245 HTN1P15515 57 aa13.32□□□□□ -0.28
SMN1-211ENST00000625245 HIST1H1AQ02539 215 aaPredicted RBP13.32□□□□□ -0.28
SMN1-211ENST00000625245 STRAPQ9Y3F4 350 aaKnown RBP13.32□□□□□ -0.28
SMN1-211ENST00000625245 SFT2D2O95562 160 aa13.31□□□□□ -0.28
SMN1-211ENST00000625245 IL5P05113 134 aa13.31□□□□□ -0.28
SMN1-211ENST00000625245 PRB4P10163 310 aaPredicted RBP13.31□□□□□ -0.28
SMN1-211ENST00000625245 TSPOP30536 169 aa13.31□□□□□ -0.28
SMN1-211ENST00000625245 RAP2BP61225 183 aa13.31□□□□□ -0.28
SMN1-211ENST00000625245 ACOT7LQ6ZUV0 252 aa13.31□□□□□ -0.28
SMN1-211ENST00000625245 C6orf223Q8N319 242 aa13.31□□□□□ -0.28
SMN1-211ENST00000625245 TOMM5Q8N4H5 51 aa13.31□□□□□ -0.28
SMN1-211ENST00000625245 ZNRF2Q8NHG8 242 aa13.31□□□□□ -0.28
SMN1-211ENST00000625245 HIGD1AQ9Y241 93 aa13.31□□□□□ -0.28
SMN1-211ENST00000625245 H3BRN7 92 aa13.3□□□□□ -0.28
SMN1-211ENST00000625245 ATP5G1P05496 136 aa13.3□□□□□ -0.28
SMN1-211ENST00000625245 RPL7P18124 248 aaKnown RBP13.3□□□□□ -0.28
SMN1-211ENST00000625245 ATP5G3P48201 142 aa13.3□□□□□ -0.28
SMN1-211ENST00000625245 TMBIM6P55061 237 aa13.3□□□□□ -0.28
SMN1-211ENST00000625245 CCL18P55774 89 aa13.3□□□□□ -0.28
SMN1-211ENST00000625245 AP3S2P59780 193 aa13.3□□□□□ -0.28
SMN1-211ENST00000625245 PPP1R1AQ13522 171 aa13.3□□□□□ -0.28
SMN1-211ENST00000625245 PYDC2Q56P42 97 aa13.3□□□□□ -0.28
SMN1-211ENST00000625245 CYP2G1PQ6ZSU1 146 aa13.3□□□□□ -0.28
SMN1-211ENST00000625245 TMEM144Q7Z5S9 345 aa13.3□□□□□ -0.28
SMN1-211ENST00000625245 MCFD2Q8NI22 146 aa13.3□□□□□ -0.28
SMN1-211ENST00000625245 SHANK2-AS3Q9BTD1 123 aa13.3□□□□□ -0.28
SMN1-211ENST00000625245 SLIRPQ9GZT3 109 aaKnown RBP13.3□□□□□ -0.28
SMN1-211ENST00000625245 PLAC8L1A1L4L8 177 aa13.29□□□□□ -0.28
SMN1-211ENST00000625245 CBY3A6NI87 242 aa13.29□□□□□ -0.28
SMN1-211ENST00000625245 HYPMO75409 117 aa13.29□□□□□ -0.28
SMN1-211ENST00000625245 OR5G3P0C626 314 aa13.29□□□□□ -0.28
SMN1-211ENST00000625245 OR8A1Q8NGG7 326 aa13.29□□□□□ -0.28
SMN1-211ENST00000625245 LRRC20Q8TCA0 184 aa13.29□□□□□ -0.28
SMN1-211ENST00000625245 NOL3O60936 208 aaKnown RBP13.28□□□□□ -0.28
SMN1-211ENST00000625245 CLINT1Q14677 625 aa13.28□□□□□ -0.28
SMN1-211ENST00000625245 TMEM256Q8N2U0 113 aa13.28□□□□□ -0.28
SMN1-211ENST00000625245 BCL7BQ9BQE9 202 aa13.28□□□□□ -0.28
SMN1-211ENST00000625245 SLC25A21Q9BQT8 299 aaPredicted RBP13.28□□□□□ -0.28
SMN1-211ENST00000625245 LINC00588Q9Y4M8 146 aa13.28□□□□□ -0.28
SMN1-211ENST00000625245 LINC00869P0C866 280 aa13.27□□□□□ -0.29
SMN1-211ENST00000625245 CXCL3P19876 107 aa13.27□□□□□ -0.29
SMN1-211ENST00000625245 TAS2R60P59551 318 aa13.27□□□□□ -0.29
SMN1-211ENST00000625245 PSG3Q16557 428 aa13.27□□□□□ -0.29
SMN1-211ENST00000625245 RNF141Q8WVD5 230 aa13.27□□□□□ -0.29
SMN1-211ENST00000625245 TRIM63Q969Q1 353 aa13.27□□□□□ -0.29
SMN1-211ENST00000625245 UHRF2Q96PU4 802 aa13.27□□□□□ -0.29
SMN1-211ENST00000625245 PSENENQ9NZ42 101 aa13.27□□□□□ -0.29
SMN1-211ENST00000625245 TIMM8BQ9Y5J9 83 aaPredicted RBP13.27□□□□□ -0.29
SMN1-211ENST00000625245 HSPG2P98160 4391 aa13.27□□□□□ -0.29
SMN1-211ENST00000625245 RRAS2P62070 204 aaPredicted RBP13.26□□□□□ -0.29
SMN1-211ENST00000625245 POLR2GP62487 172 aaKnown RBP eCLIP13.26□□□□□ -0.29
SMN1-211ENST00000625245 MAPKAPK5-AS1Q8N8E1 139 aa13.26□□□□□ -0.29
SMN1-211ENST00000625245 C16orf74Q96GX8 76 aa13.26□□□□□ -0.29
SMN1-211ENST00000625245 H3BMQ9 156 aa13.25□□□□□ -0.29
SMN1-211ENST00000625245 CDK2AP2O75956 126 aa13.25□□□□□ -0.29
SMN1-211ENST00000625245 ANXA7P20073 488 aaKnown RBP13.25□□□□□ -0.29
SMN1-211ENST00000625245 SSX7Q7RTT5 188 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms