RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 LOC107986453A0A1B0GWG9 222 aa7.43□□□□□ -1.22
USB1-216ENST00000624720 RBAKDNA6NC62 111 aa7.43□□□□□ -1.22
USB1-216ENST00000624720 MGST1P10620 155 aaKnown RBP7.43□□□□□ -1.22
USB1-216ENST00000624720 MAGEA5P43359 124 aa7.43□□□□□ -1.22
USB1-216ENST00000624720 TMEM14EPQ6UXP3 125 aa7.43□□□□□ -1.22
USB1-216ENST00000624720 GJC3Q8NFK1 279 aa7.43□□□□□ -1.22
USB1-216ENST00000624720 H1FXQ92522 213 aaKnown RBP7.43□□□□□ -1.22
USB1-216ENST00000624720 TMEM178BH3BS89 294 aa7.43□□□□□ -1.22
USB1-216ENST00000624720 ZIC3O60481 467 aa7.43□□□□□ -1.22
USB1-216ENST00000624720 OXTP01178 125 aa7.43□□□□□ -1.22
USB1-216ENST00000624720 HLA-DQA1P01909 254 aa7.43□□□□□ -1.22
USB1-216ENST00000624720 LIFP15018 202 aa7.43□□□□□ -1.22
USB1-216ENST00000624720 ARL16Q0P5N6 197 aa7.43□□□□□ -1.22
USB1-216ENST00000624720 OR11H6Q8NGC7 330 aa7.43□□□□□ -1.22
USB1-216ENST00000624720 OR9G1Q8NH87 305 aa7.43□□□□□ -1.22
USB1-216ENST00000624720 LRRC29Q8WV35 223 aa7.43□□□□□ -1.22
USB1-216ENST00000624720 SLC39A9Q9NUM3 307 aa7.43□□□□□ -1.22
USB1-216ENST00000624720 PCNX1Q96RV3 2341 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 PRR14LQ5THK1 2151 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 TRBV5-5A0A0J9YX44 114 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 A8MWL6 223 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 LMX1BO60663 402 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 ZNF883P0CG24 379 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 BCL3P20749 454 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 DYNLT3P51808 116 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 ZNF816Q0VGE8 651 aaPredicted RBP7.42□□□□□ -1.22
USB1-216ENST00000624720 TMEM147Q9BVK8 224 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 SRXN1Q9BYN0 137 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 ADGRG4Q8IZF6 3080 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 KIAA2026Q5HYC2 2103 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 SMG1Q96Q15 3661 aaKnown RBP7.42□□□□□ -1.22
USB1-216ENST00000624720 ROS1P08922 2347 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 A0A0U1RQV1 116 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 NPIPB6E9PJ23 425 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 ZNF823P16415 610 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 FXYD2P54710 66 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 DEFB109BQ30KR1 87 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 SP6Q3SY56 376 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 FAM57BQ71RH2 274 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 IL1F10Q8WWZ1 152 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 SPACA5Q96QH8 159 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 TNFRSF19Q9NS68 423 aa7.42□□□□□ -1.22
USB1-216ENST00000624720 RRHO14718 337 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 LEPROTL1O95214 131 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 IFI6P09912 130 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 MPV17P39210 176 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 DSCR4P56555 118 aaPredicted RBP7.41□□□□□ -1.22
USB1-216ENST00000624720 BCL6BQ8N143 479 aaPredicted RBP7.41□□□□□ -1.22
USB1-216ENST00000624720 TMEM252Q8N6L7 170 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 NHP2Q9NX24 153 aaKnown RBP7.41□□□□□ -1.22
USB1-216ENST00000624720 TRBV5-7A0A0A0MS05 114 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.41□□□□□ -1.22
USB1-216ENST00000624720 C4orf45Q96LM5 186 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 PCSK5Q92824 1860 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 FREM1Q5H8C1 2179 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 COL6A6A6NMZ7 2263 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 POLEQ07864 2286 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 TRAV8-1A0A0A6YYK1 113 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 CST7O76096 145 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 HERV-K104P61576 105 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 FOXC1Q12948 553 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 CDSNQ15517 529 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 KHDC1LQ5JSQ8 128 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 TMEM200BQ69YZ2 307 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 DGAT2L7PQ6IED9 249 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 MMD2Q8IY49 270 aa7.41□□□□□ -1.22
USB1-216ENST00000624720 TRAV8-2A0A0B4J237 113 aa7.4□□□□□ -1.22
USB1-216ENST00000624720 OVOL1O14753 267 aa7.4□□□□□ -1.22
USB1-216ENST00000624720 GFRA3O60609 400 aa7.4□□□□□ -1.22
USB1-216ENST00000624720 TMEM187Q14656 261 aa7.4□□□□□ -1.22
USB1-216ENST00000624720 KLF17Q5JT82 389 aaPredicted RBP7.4□□□□□ -1.22
USB1-216ENST00000624720 CEND1Q8N111 149 aa7.4□□□□□ -1.22
USB1-216ENST00000624720 WDR31Q8NA23 367 aa7.4□□□□□ -1.22
USB1-216ENST00000624720 VSIRQ9H7M9 311 aa7.4□□□□□ -1.22
USB1-216ENST00000624720 SAP30LQ9HAJ7 183 aa7.4□□□□□ -1.22
USB1-216ENST00000624720 TLN1Q9Y490 2541 aaKnown RBP7.4□□□□□ -1.23
USB1-216ENST00000624720 A0A096LPE4 126 aa7.4□□□□□ -1.23
USB1-216ENST00000624720 TEX50A0A1B0GTY4 177 aa7.4□□□□□ -1.23
USB1-216ENST00000624720 A0A1W2PPZ6 126 aa7.4□□□□□ -1.23
USB1-216ENST00000624720 C5orf63A6NC05 138 aa7.4□□□□□ -1.23
USB1-216ENST00000624720 WDR38Q5JTN6 314 aa7.4□□□□□ -1.23
USB1-216ENST00000624720 FAM120AOSQ5T036 256 aa7.4□□□□□ -1.23
USB1-216ENST00000624720 C15orf53Q8NAA6 179 aa7.4□□□□□ -1.23
USB1-216ENST00000624720 NUP35Q8NFH5 326 aa7.4□□□□□ -1.23
USB1-216ENST00000624720 TPSG1Q9NRR2 321 aa7.4□□□□□ -1.23
USB1-216ENST00000624720 KCNIP2Q9NS61 270 aa7.4□□□□□ -1.23
USB1-216ENST00000624720 CD7P09564 240 aa7.39□□□□□ -1.23
USB1-216ENST00000624720 PHLDA2Q53GA4 152 aa7.39□□□□□ -1.23
USB1-216ENST00000624720 LHFPL1Q86WI0 220 aa7.39□□□□□ -1.23
USB1-216ENST00000624720 CIARTQ8N365 385 aaPredicted RBP7.39□□□□□ -1.23
USB1-216ENST00000624720 FDCSPQ8NFU4 85 aa7.39□□□□□ -1.23
USB1-216ENST00000624720 PLEKHB2Q96CS7 222 aa7.39□□□□□ -1.23
USB1-216ENST00000624720 CYYR1Q96J86 154 aa7.39□□□□□ -1.23
USB1-216ENST00000624720 PRRG4Q9BZD6 226 aa7.39□□□□□ -1.23
USB1-216ENST00000624720 ICE1Q9Y2F5 2266 aa7.39□□□□□ -1.23
USB1-216ENST00000624720 IGLV1-36A0A0B4J1U3 117 aa7.39□□□□□ -1.23
USB1-216ENST00000624720 NPPCP23582 126 aa7.39□□□□□ -1.23
USB1-216ENST00000624720 FOXA3P55318 350 aaPredicted RBP7.39□□□□□ -1.23
USB1-216ENST00000624720 TMEM258P61165 79 aa7.39□□□□□ -1.23
USB1-216ENST00000624720 LINC00173Q6ZV60 143 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms