RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 HIST1H2BJP06899 126 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 CBLN1P23435 193 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 HIST1H2BOP23527 126 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 HIST1H2BBP33778 126 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 BMI1P35226 326 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 RPS10P46783 165 aaKnown RBP5.85□□□□□ -1.47
CLK1-215ENST00000621181 FGF8P55075 233 aaPredicted RBP5.85□□□□□ -1.47
CLK1-215ENST00000621181 HIST1H2BDP58876 126 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 HIST1H2BCP62807 126 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 HIST2H2BEQ16778 126 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 ATP6V1FQ16864 119 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 TMEM177Q53S58 311 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 SPANXN5Q5MJ07 72 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.85□□□□□ -1.47
CLK1-215ENST00000621181 RNASE11Q8TAA1 199 aaKnown RBP5.85□□□□□ -1.47
CLK1-215ENST00000621181 CACNG8Q8WXS5 425 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 HIST1H2BHQ93079 126 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 HIST1H2BNQ99877 126 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 HIST1H2BMQ99879 126 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 PYGO2Q9BRQ0 406 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 MAP1LC3BQ9GZQ8 125 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 OR51M1Q9H341 326 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 DOK5Q9P104 306 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 VAX2Q9UIW0 290 aa5.85□□□□□ -1.47
CLK1-215ENST00000621181 LINC00473A8K010 186 aa5.84□□□□□ -1.47
CLK1-215ENST00000621181 FABP1P07148 127 aa5.84□□□□□ -1.47
CLK1-215ENST00000621181 G6PCP35575 357 aa5.84□□□□□ -1.47
CLK1-215ENST00000621181 RAB11AP62491 216 aa5.84□□□□□ -1.47
CLK1-215ENST00000621181 MRGPRG-AS1Q2M3A8 158 aa5.84□□□□□ -1.47
CLK1-215ENST00000621181 TMEM147Q9BVK8 224 aa5.84□□□□□ -1.47
CLK1-215ENST00000621181 ZNF430Q9H8G1 570 aaPredicted RBP5.84□□□□□ -1.47
CLK1-215ENST00000621181 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.84□□□□□ -1.47
CLK1-215ENST00000621181 UBE2L5PA0A1B0GUS4 154 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 ZFP92A6NM28 416 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 YIF1AO95070 293 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 KRASP01116 189 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 IGHV3-23P01764 117 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 S100A9P06702 114 aaKnown RBP5.83□□□□□ -1.48
CLK1-215ENST00000621181 PFN1P07737 140 aaKnown RBP5.83□□□□□ -1.48
CLK1-215ENST00000621181 SAA1P0DJI8 122 aaPredicted RBP5.83□□□□□ -1.48
CLK1-215ENST00000621181 ARL3P36405 182 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 APOC4P55056 127 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 DEFB135Q30KP9 77 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 FAM106AQ4KMX7 169 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 TM4SF20Q53R12 229 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 C10orf55Q5SWW7 151 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 SLC25A24Q6NUK1 477 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 ZNF66Q6ZN08 573 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 CYP2G1PQ6ZSU1 146 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 Q6ZWC4 215 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 GPHB5Q86YW7 130 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 WFDC3Q8IUB2 231 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 TTC9CQ8N5M4 171 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 OSR1Q8TAX0 266 aaPredicted RBP5.83□□□□□ -1.48
CLK1-215ENST00000621181 ADTRPQ96IZ2 230 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 GGACTQ9BVM4 153 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 CTDSP1Q9GZU7 261 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 NIT2Q9NQR4 276 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 FBXL7Q9UJT9 491 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 CTXND1A0A1B0GTU2 59 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 TMEM213A2RRL7 107 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 C15orf62A8K5M9 175 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 TMEM250H0YL14 139 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 TGOLN2O43493 480 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 SPRY2O43597 315 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 S100PP25815 95 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 CEBPGP53567 150 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 ELLP55199 621 aaPredicted RBP5.83□□□□□ -1.48
CLK1-215ENST00000621181 PYY3Q5JQD4 70 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 OR4A47Q6IF82 309 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 CLEC19AQ6UXS0 136 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 RBPMS2Q6ZRY4 209 aaKnown RBP5.83□□□□□ -1.48
CLK1-215ENST00000621181 MMD2Q8IY49 270 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 HIST3H2BBQ8N257 126 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 LILRB2Q8N423 598 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 OR1L6Q8NGR2 347 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 FRZBQ92765 325 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 FAM210BQ96KR6 192 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 HSD17B10Q99714 261 aaKnown RBP5.83□□□□□ -1.48
CLK1-215ENST00000621181 TP53TG1Q9Y2A0 90 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 ZNF257Q9Y2Q1 563 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 URGCP-MRPS24S4R325 110 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 S4R3C0 116 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 KMT2AQ03164 3969 aa5.83□□□□□ -1.48
CLK1-215ENST00000621181 CEBPZOSA8MTT3 80 aa5.82□□□□□ -1.48
CLK1-215ENST00000621181 A8MWP6 167 aa5.82□□□□□ -1.48
CLK1-215ENST00000621181 PRSS46E5RG02 174 aa5.82□□□□□ -1.48
CLK1-215ENST00000621181 KBTBD11O94819 623 aa5.82□□□□□ -1.48
CLK1-215ENST00000621181 TRGC2P03986 189 aa5.82□□□□□ -1.48
CLK1-215ENST00000621181 NPPCP23582 126 aa5.82□□□□□ -1.48
CLK1-215ENST00000621181 DUTP33316 252 aaKnown RBP5.82□□□□□ -1.48
CLK1-215ENST00000621181 MEF2BQ02080 365 aaPredicted RBP5.82□□□□□ -1.48
CLK1-215ENST00000621181 CATR1Q13166 79 aa5.82□□□□□ -1.48
CLK1-215ENST00000621181 ZNF674Q2M3X9 581 aa5.82□□□□□ -1.48
CLK1-215ENST00000621181 OR2B11Q5JQS5 317 aa5.82□□□□□ -1.48
CLK1-215ENST00000621181 DNLZQ5SXM8 178 aa5.82□□□□□ -1.48
CLK1-215ENST00000621181 LGALS9CQ6DKI2 356 aa5.82□□□□□ -1.48
CLK1-215ENST00000621181 OR8G2PQ6IF36 304 aa5.82□□□□□ -1.48
CLK1-215ENST00000621181 DTD1Q8TEA8 209 aa5.82□□□□□ -1.48
CLK1-215ENST00000621181 PHLDA1Q8WV24 401 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms