RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 PIP4P1Q86T03 277 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 ANAPC16Q96DE5 110 aa6.75□□□□□ -1.33
PTPDC1-204ENST00000620992 TNRC18O15417 2968 aaPredicted RBP6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 SCO2A0A1W2PP80 73 aa6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 JKAMPQ9P055 326 aa6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 F11RQ9Y624 299 aaKnown RBP6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 ARHGAP32A7KAX9 2087 aa6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 NPIPB6E9PJ23 425 aa6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 TM4SF5O14894 197 aa6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 CA1P00915 261 aaPredicted RBP6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 CD7P09564 240 aa6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 IQCJQ1A5X6 159 aa6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 TEX29Q8N6K0 151 aa6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 TEX45Q8NA69 505 aa6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 PMCHL2Q9BQD1 86 aa6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 AGMATQ9BSE5 352 aa6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 MAP1LC3CQ9BXW4 147 aa6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 PARD6GQ9BYG4 376 aaPredicted RBP6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 HCFC1P51610 2035 aa6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 TRAV30A0A087WSZ9 112 aa6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 C15orf62A8K5M9 175 aa6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 DUTP33316 252 aaKnown RBP6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 TCTEX1D1Q8N7M0 179 aa6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 TMEM191AQ9H0A3 160 aa6.74□□□□□ -1.33
PTPDC1-204ENST00000620992 IGKV1-16P04430 117 aa6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 C11orf53Q8IXP5 236 aa6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 KLHL30-AS1Q8NEE0 82 aa6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 FAM110DQ8TAY7 271 aaPredicted RBP6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 PMS2P5A8MQ11 134 aa6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 NPIPB5A8MRT5 1133 aa6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 SNCGO76070 127 aa6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 IGHV1-8P0DP01 117 aa6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 GZMBP10144 247 aa6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 ZNF25P17030 456 aaPredicted RBP6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 STHQ8IWL8 128 aa6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 SLC25A39Q9BZJ4 359 aaPredicted RBP6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 C7orf71A4D174 169 aa6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 MBD3L4A6NDZ8 208 aaPredicted RBP6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 MBD3L3A6NE82 208 aaPredicted RBP6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 MBD3L5A6NJ08 208 aaPredicted RBP6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 MBD3L2Q8NHZ7 208 aaPredicted RBP6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 IGKV1D-17A0A075B6S4 117 aa6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 A0A1B0GUS0 222 aa6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 JOSD1Q15040 202 aaPredicted RBP6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 TCF23Q7RTU1 214 aa6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 RAB37Q96AX2 223 aa6.73□□□□□ -1.33
PTPDC1-204ENST00000620992 UPK2O00526 184 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 TSPOP30536 169 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 ZNF415Q09FC8 603 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 SFTA2Q6UW10 78 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 GTF2H5Q6ZYL4 71 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 REC114Q7Z4M0 266 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 LINC01551Q86U37 167 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 TMEM170AQ8WVE7 144 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 RNF125Q96EQ8 232 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 RNASE7Q9H1E1 156 aaKnown RBP6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 WDR83OSQ9Y284 106 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 MAP1AP78559 2803 aaPredicted RBP6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 LOC107984156A0A0G2JMH3 177 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 G3V318 75 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 AREGP15514 252 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 CR1LQ2VPA4 569 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 TMEM97Q5BJF2 176 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 MEIG1Q5JSS6 88 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 TMEM170BQ5T4T1 132 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 C19orf35Q6ZS72 473 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 ARL17AQ8IVW1 177 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 PIP4P2Q8N4L2 257 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 SYT8Q8NBV8 401 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 OR13C6PQ8NH95 151 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 SSBP4Q9BWG4 385 aaPredicted RBP6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 BET1LQ9NYM9 111 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 TRAV8-6A0A0B4J262 113 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 TRAV41A0A0B4J266 112 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 DIRC3C9JPN6 131 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 YPEL1O60688 119 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 HLA-DRB1P01911 266 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 SYNJ2BPP57105 145 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 TCF24Q7RTU0 167 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 EXOC3-AS1Q8N2X6 119 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 ZNF114Q8NC26 417 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 YPEL2Q96QA6 119 aa6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 GEMIN7Q9H840 131 aaKnown RBP6.72□□□□□ -1.33
PTPDC1-204ENST00000620992 VENTXO95231 258 aa6.71□□□□□ -1.33
PTPDC1-204ENST00000620992 P0C879 139 aa6.71□□□□□ -1.33
PTPDC1-204ENST00000620992 TREML4Q6UXN2 200 aa6.71□□□□□ -1.33
PTPDC1-204ENST00000620992 ZNF664Q8N3J9 261 aa6.71□□□□□ -1.33
PTPDC1-204ENST00000620992 SOX21Q9Y651 276 aaPredicted RBP6.71□□□□□ -1.33
PTPDC1-204ENST00000620992 KMT2EQ8IZD2 1858 aa6.71□□□□□ -1.33
PTPDC1-204ENST00000620992 TRAV8-1A0A0A6YYK1 113 aa6.71□□□□□ -1.34
PTPDC1-204ENST00000620992 IGHG3P01860 377 aa6.71□□□□□ -1.34
PTPDC1-204ENST00000620992 MRPL18Q9H0U6 180 aaKnown RBP6.71□□□□□ -1.34
PTPDC1-204ENST00000620992 BOD1L1Q8NFC6 3051 aa6.71□□□□□ -1.34
PTPDC1-204ENST00000620992 IGHV1-3A0A0C4DH29 117 aa6.71□□□□□ -1.34
PTPDC1-204ENST00000620992 OVOL3O00110 214 aa6.71□□□□□ -1.34
PTPDC1-204ENST00000620992 CIDEAO60543 219 aa6.71□□□□□ -1.34
PTPDC1-204ENST00000620992 FCN3O75636 299 aa6.71□□□□□ -1.34
PTPDC1-204ENST00000620992 TMEM183BQ1AE95 376 aa6.71□□□□□ -1.34
PTPDC1-204ENST00000620992 HIST2H2BCQ6DN03 193 aa6.71□□□□□ -1.34
PTPDC1-204ENST00000620992 FAM19A2Q8N3H0 131 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms