RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 TMEM116Q8NCL8 245 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 TMEM191AQ9H0A3 160 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 WDFY4Q6ZS81 3184 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 M0R1W7 72 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 LEPROTL1O95214 131 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 PMCHL1Q16048 86 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 VMO1Q7Z5L0 202 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 MAP1LC3CQ9BXW4 147 aa7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 SOX21Q9Y651 276 aaPredicted RBP7.38□□□□□ -1.23
RBFOX1-223ENST00000620507 NHLH1Q02575 133 aa7.37□□□□□ -1.23
RBFOX1-223ENST00000620507 PRDM13Q9H4Q3 707 aa7.37□□□□□ -1.23
RBFOX1-223ENST00000620507 NAV3Q8IVL0 2385 aa7.37□□□□□ -1.23
RBFOX1-223ENST00000620507 A0A1B0GUT8 65 aa7.37□□□□□ -1.23
RBFOX1-223ENST00000620507 TMEM238C9JI98 176 aa7.37□□□□□ -1.23
RBFOX1-223ENST00000620507 SP5Q6BEB4 398 aaPredicted RBP7.37□□□□□ -1.23
RBFOX1-223ENST00000620507 Q8N7P7 452 aa7.37□□□□□ -1.23
RBFOX1-223ENST00000620507 FXYD5Q96DB9 178 aa7.37□□□□□ -1.23
RBFOX1-223ENST00000620507 CELSR3Q9NYQ7 3312 aa7.37□□□□□ -1.23
RBFOX1-223ENST00000620507 GPR183P32249 361 aa7.37□□□□□ -1.23
RBFOX1-223ENST00000620507 DLX6P56179 175 aa7.37□□□□□ -1.23
RBFOX1-223ENST00000620507 ST6GALNAC6Q969X2 333 aa7.37□□□□□ -1.23
RBFOX1-223ENST00000620507 SMIM12Q96EX1 92 aa7.37□□□□□ -1.23
RBFOX1-223ENST00000620507 IGHV3OR16-13A0A075B7E8 117 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 IGHV3OR16-10A0A075B7F0 116 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 IGHV3-74A0A0B4J1X5 117 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 C22orf46C9J442 243 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 ASPHD1Q5U4P2 390 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 RASL11AQ6T310 242 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 CIARTQ8N365 385 aaPredicted RBP7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 JKAMPQ9P055 326 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 HSPB8Q9UJY1 196 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 PSG8Q9UQ74 426 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 CREBBPQ92793 2442 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 IGLV2-23P01705 113 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 Q0VG73 95 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 PATE2Q6UY27 113 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 ATP5L2Q7Z4Y8 100 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 SRSF8Q9BRL6 282 aaKnown RBP7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 ZFP30Q9Y2G7 519 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 COL6A3P12111 3177 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 INS-IGF2F8WCM5 200 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 TOMM40O96008 361 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 PRR31Q5SQ13 230 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 TMEM136Q6ZRR5 245 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 ZNF738Q8NE65 137 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 FAM167A-AS1Q96KT0 104 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 UQCR10Q9UDW1 63 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 NCOR2Q9Y618 2525 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 LOC389332A0A1B0GUA5 103 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 IGLV1-47P01700 117 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 GPX1P07203 203 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 OR5AL1P0C617 328 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 C1orf194Q5T5A4 169 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 DPF1Q92782 380 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 METTL26Q96S19 204 aa7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 MRPL36Q9P0J6 103 aaKnown RBP7.36□□□□□ -1.23
RBFOX1-223ENST00000620507 IGLC1P0CG04 106 aa7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 S100A4P26447 101 aaKnown RBP7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 TWIST1Q15672 202 aa7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 TMEM95Q3KNT9 176 aa7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 LDLRAD2Q5SZI1 272 aa7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 CGB1A6NKQ9 187 aa7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 A8MWP6 167 aa7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 OOSP1A8MZH6 123 aa7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 PDLIM4P50479 330 aa7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 RAB9AP51151 201 aa7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 MINOS1Q5TGZ0 78 aa7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 ZNF562Q6V9R5 426 aa7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 ZNF503Q96F45 646 aa7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 MINOS1-NBL1R4GNA1 71 aa7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 SMIM27A0A1W2PRY6 76 aa7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 EFNA4P52798 201 aa7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 UNQ6494/PRO21346Q6UXR6 183 aa7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 FAM231DQ6ZW35 169 aa7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 TMEM70Q9BUB7 260 aa7.35□□□□□ -1.23
RBFOX1-223ENST00000620507 IGKV3-7A0A075B6H7 116 aa7.34□□□□□ -1.23
RBFOX1-223ENST00000620507 IGHV3-49A0A0A0MS15 119 aa7.34□□□□□ -1.23
RBFOX1-223ENST00000620507 FAM168AQ92567 244 aa7.34□□□□□ -1.23
RBFOX1-223ENST00000620507 MIEN1Q9BRT3 115 aa7.34□□□□□ -1.23
RBFOX1-223ENST00000620507 SHANK2-AS3Q9BTD1 123 aa7.34□□□□□ -1.23
RBFOX1-223ENST00000620507 AP5S1Q9NUS5 200 aa7.34□□□□□ -1.23
RBFOX1-223ENST00000620507 IGHV3-66A0A0C4DH42 116 aa7.34□□□□□ -1.23
RBFOX1-223ENST00000620507 M0R3E3 92 aa7.34□□□□□ -1.23
RBFOX1-223ENST00000620507 TMEM78Q5T7P6 136 aa7.34□□□□□ -1.23
RBFOX1-223ENST00000620507 EEF1AKMT3Q96AZ1 226 aa7.34□□□□□ -1.23
RBFOX1-223ENST00000620507 PIMREGQ9BSJ6 248 aa7.34□□□□□ -1.23
RBFOX1-223ENST00000620507 MUC21A0A0G2JKD1 596 aa7.34□□□□□ -1.24
RBFOX1-223ENST00000620507 MUC21A0A140T8X8 626 aa7.34□□□□□ -1.24
RBFOX1-223ENST00000620507 CKS2P33552 79 aa7.34□□□□□ -1.24
RBFOX1-223ENST00000620507 RPL24P83731 157 aaKnown RBP7.34□□□□□ -1.24
RBFOX1-223ENST00000620507 RHOGP84095 191 aa7.34□□□□□ -1.24
RBFOX1-223ENST00000620507 MUC21Q5SSG8 566 aa7.34□□□□□ -1.24
RBFOX1-223ENST00000620507 CLEC19AQ6UXS0 136 aa7.34□□□□□ -1.24
RBFOX1-223ENST00000620507 OR8A1Q8NGG7 326 aa7.34□□□□□ -1.24
RBFOX1-223ENST00000620507 ATP5J2P56134 94 aa7.33□□□□□ -1.24
RBFOX1-223ENST00000620507 Q6AWC8 147 aa7.33□□□□□ -1.24
RBFOX1-223ENST00000620507 NIT1Q86X76 327 aa7.33□□□□□ -1.24
RBFOX1-223ENST00000620507 RNASE8Q8TDE3 154 aaKnown RBP7.33□□□□□ -1.24
RBFOX1-223ENST00000620507 C1orf159Q96HA4 380 aa7.33□□□□□ -1.24
RBFOX1-223ENST00000620507 ZNF207O43670 478 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms