RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 POLR3KQ9Y2Y1 108 aaPredicted RBP11.2□□□□□ -0.62
CNOT3-210ENST00000618939 IGKV2-40A0A087WW87 121 aaPredicted RBP11.2□□□□□ -0.62
CNOT3-210ENST00000618939 OOSP1A8MZH6 123 aa11.2□□□□□ -0.62
CNOT3-210ENST00000618939 IGKV2D-40P01614 121 aaPredicted RBP11.2□□□□□ -0.62
CNOT3-210ENST00000618939 M0R3E3 92 aa11.2□□□□□ -0.62
CNOT3-210ENST00000618939 LHBP01229 141 aa11.2□□□□□ -0.62
CNOT3-210ENST00000618939 RPL15P61313 204 aaKnown RBP11.2□□□□□ -0.62
CNOT3-210ENST00000618939 FAM168AQ92567 244 aa11.2□□□□□ -0.62
CNOT3-210ENST00000618939 ANKHD1Q8IWZ3 2542 aaKnown RBP11.2□□□□□ -0.62
CNOT3-210ENST00000618939 M0R1W7 72 aa11.19□□□□□ -0.62
CNOT3-210ENST00000618939 FABP2P12104 132 aa11.19□□□□□ -0.62
CNOT3-210ENST00000618939 C21orf62-AS1Q17RA5 79 aa11.19□□□□□ -0.62
CNOT3-210ENST00000618939 C15orf32Q32M92 178 aa11.19□□□□□ -0.62
CNOT3-210ENST00000618939 Q86TA4 180 aa11.19□□□□□ -0.62
CNOT3-210ENST00000618939 LURAP1LQ8IV03 231 aa11.19□□□□□ -0.62
CNOT3-210ENST00000618939 OTOGLQ3ZCN5 2332 aa11.19□□□□□ -0.62
CNOT3-210ENST00000618939 IGHV3-11P01762 117 aa11.19□□□□□ -0.62
CNOT3-210ENST00000618939 HBDP02042 147 aa11.19□□□□□ -0.62
CNOT3-210ENST00000618939 MINOS1Q5TGZ0 78 aa11.19□□□□□ -0.62
CNOT3-210ENST00000618939 TMEM160Q9NX00 188 aa11.19□□□□□ -0.62
CNOT3-210ENST00000618939 MINOS1-NBL1R4GNA1 71 aa11.19□□□□□ -0.62
CNOT3-210ENST00000618939 SRSF8Q9BRL6 282 aaKnown RBP11.19□□□□□ -0.62
CNOT3-210ENST00000618939 PEF1Q9UBV8 284 aaKnown RBP11.19□□□□□ -0.62
CNOT3-210ENST00000618939 MUC6Q6W4X9 2439 aa11.18□□□□□ -0.62
CNOT3-210ENST00000618939 WISP2O76076 250 aa11.18□□□□□ -0.62
CNOT3-210ENST00000618939 PPIFP30405 207 aaKnown RBP11.18□□□□□ -0.62
CNOT3-210ENST00000618939 FAM159AQ6UWV7 190 aa11.18□□□□□ -0.62
CNOT3-210ENST00000618939 LYPD1Q8N2G4 141 aa11.18□□□□□ -0.62
CNOT3-210ENST00000618939 DYNLRB2Q8TF09 96 aa11.18□□□□□ -0.62
CNOT3-210ENST00000618939 SMIM12Q96EX1 92 aa11.18□□□□□ -0.62
CNOT3-210ENST00000618939 ATP5LO75964 103 aa11.18□□□□□ -0.62
CNOT3-210ENST00000618939 SYT8Q8NBV8 401 aa11.18□□□□□ -0.62
CNOT3-210ENST00000618939 SHANK2-AS3Q9BTD1 123 aa11.18□□□□□ -0.62
CNOT3-210ENST00000618939 ARHGAP21Q5T5U3 1957 aa11.18□□□□□ -0.62
CNOT3-210ENST00000618939 A6NNC1 897 aa11.18□□□□□ -0.62
CNOT3-210ENST00000618939 EREGO14944 169 aa11.18□□□□□ -0.62
CNOT3-210ENST00000618939 PRTN3P24158 256 aa11.18□□□□□ -0.62
CNOT3-210ENST00000618939 ASIPP42127 132 aa11.18□□□□□ -0.62
CNOT3-210ENST00000618939 CDPF1Q6NVV7 123 aa11.18□□□□□ -0.62
CNOT3-210ENST00000618939 ODF3L1Q8IXM7 274 aa11.18□□□□□ -0.62
CNOT3-210ENST00000618939 C18orf32Q8TCD1 76 aa11.18□□□□□ -0.62
CNOT3-210ENST00000618939 C7orf69Q9H7B7 122 aa11.18□□□□□ -0.62
CNOT3-210ENST00000618939 A0A0G2JLM5 398 aa11.17□□□□□ -0.62
CNOT3-210ENST00000618939 FOXC2Q99958 501 aa11.17□□□□□ -0.62
CNOT3-210ENST00000618939 ST20Q9HBF5 79 aa11.17□□□□□ -0.62
CNOT3-210ENST00000618939 NOTCH3Q9UM47 2321 aa11.17□□□□□ -0.62
CNOT3-210ENST00000618939 PPBPP02775 128 aa11.17□□□□□ -0.62
CNOT3-210ENST00000618939 PSG3Q16557 428 aa11.17□□□□□ -0.62
CNOT3-210ENST00000618939 HIST1H4GQ99525 98 aa11.17□□□□□ -0.62
CNOT3-210ENST00000618939 COTL1Q14019 142 aa11.17□□□□□ -0.62
CNOT3-210ENST00000618939 LY6DQ14210 128 aa11.17□□□□□ -0.62
CNOT3-210ENST00000618939 FNDC4Q9H6D8 234 aaPredicted RBP11.17□□□□□ -0.62
CNOT3-210ENST00000618939 TNCP24821 2201 aa11.17□□□□□ -0.62
CNOT3-210ENST00000618939 TRAV8-6A0A0B4J262 113 aa11.17□□□□□ -0.62
CNOT3-210ENST00000618939 K7EM74 188 aa11.17□□□□□ -0.62
CNOT3-210ENST00000618939 K7EN84 100 aa11.17□□□□□ -0.62
CNOT3-210ENST00000618939 LYZL1Q6UWQ5 148 aa11.17□□□□□ -0.62
CNOT3-210ENST00000618939 DDB2Q92466 427 aa11.17□□□□□ -0.62
CNOT3-210ENST00000618939 CEP192Q8TEP8 1941 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 COA6Q5JTJ3 125 aaKnown RBP11.16□□□□□ -0.62
CNOT3-210ENST00000618939 FAM231DQ6ZW35 169 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 K7ENP7 123 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 CEACAM4O75871 244 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 CACNG7P62955 275 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 FAM74A4Q5TZK3 123 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 Q6ZWC4 215 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 C20orf144Q9BQM9 153 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 LINC00527Q9UJ94 153 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 OR11H12B2RN74 326 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 IGKV3-20P01619 116 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 LEPP41159 167 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 EFNA4P52798 201 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 OR11H1Q8NG94 326 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 OR1N2Q8NGR9 330 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 OR11H2Q8NH07 326 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 Q8TAT8 98 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 D6R8Y8 96 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 ZNF492Q9P255 531 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 KAAG1Q9UBP8 84 aa11.16□□□□□ -0.62
CNOT3-210ENST00000618939 ZNF138P52744 262 aa11.15□□□□□ -0.62
CNOT3-210ENST00000618939 SEM1Q6ZVN7 128 aa11.15□□□□□ -0.62
CNOT3-210ENST00000618939 COX6B1P14854 86 aa11.15□□□□□ -0.62
CNOT3-210ENST00000618939 PSMB2P49721 201 aa11.15□□□□□ -0.62
CNOT3-210ENST00000618939 ZNF295-AS1Q8N0V1 137 aa11.15□□□□□ -0.62
CNOT3-210ENST00000618939 KIR2DL4Q99706 377 aa11.15□□□□□ -0.62
CNOT3-210ENST00000618939 NXT2Q9NPJ8 142 aaKnown RBP11.15□□□□□ -0.62
CNOT3-210ENST00000618939 TMEM238LA0A1B0GVL6 79 aa11.15□□□□□ -0.63
CNOT3-210ENST00000618939 A6NJY4 79 aa11.15□□□□□ -0.63
CNOT3-210ENST00000618939 SLAQ13239 276 aa11.15□□□□□ -0.63
CNOT3-210ENST00000618939 ERASQ7Z444 233 aa11.15□□□□□ -0.63
CNOT3-210ENST00000618939 THAP8Q8NA92 274 aa11.15□□□□□ -0.63
CNOT3-210ENST00000618939 PRO3102Q9H379 93 aa11.15□□□□□ -0.63
CNOT3-210ENST00000618939 CTSZQ9UBR2 303 aa11.15□□□□□ -0.63
CNOT3-210ENST00000618939 SNRPD3P62318 126 aaKnown RBP11.14□□□□□ -0.63
CNOT3-210ENST00000618939 MSMPQ1L6U9 139 aa11.14□□□□□ -0.63
CNOT3-210ENST00000618939 PSMG4Q5JS54 123 aa11.14□□□□□ -0.63
CNOT3-210ENST00000618939 ZNF562Q6V9R5 426 aa11.14□□□□□ -0.63
CNOT3-210ENST00000618939 IFI27L1Q96BM0 104 aa11.14□□□□□ -0.63
CNOT3-210ENST00000618939 FXYD5Q96DB9 178 aa11.14□□□□□ -0.63
CNOT3-210ENST00000618939 GFRA4Q9GZZ7 299 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms