RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 TCF24Q7RTU0 167 aa17.04■□□□□ 0.32
CBWD3-213ENST00000618217 TSPAN4O14817 238 aa17.03■□□□□ 0.32
CBWD3-213ENST00000618217 CD5P06127 495 aa17.03■□□□□ 0.32
CBWD3-213ENST00000618217 LCN12Q6JVE5 192 aa17.03■□□□□ 0.32
CBWD3-213ENST00000618217 PHYHIPLQ96FC7 376 aa17.03■□□□□ 0.32
CBWD3-213ENST00000618217 S100A7P31151 101 aa17.03■□□□□ 0.32
CBWD3-213ENST00000618217 SERF2P84101 59 aa17.03■□□□□ 0.32
CBWD3-213ENST00000618217 RBPMS2Q6ZRY4 209 aaKnown RBP17.02■□□□□ 0.31
CBWD3-213ENST00000618217 S100A7AQ86SG5 101 aa17.02■□□□□ 0.31
CBWD3-213ENST00000618217 OR8I2Q8N0Y5 310 aa17.02■□□□□ 0.31
CBWD3-213ENST00000618217 SLC25A32Q9H2D1 315 aa17.02■□□□□ 0.31
CBWD3-213ENST00000618217 SEPSECSQ9HD40 501 aaKnown RBP17.02■□□□□ 0.31
CBWD3-213ENST00000618217 SPP1P10451 314 aa17.01■□□□□ 0.31
CBWD3-213ENST00000618217 PCNPQ8WW12 178 aaKnown RBP17.01■□□□□ 0.31
CBWD3-213ENST00000618217 SLC25A22Q9H936 323 aa17.01■□□□□ 0.31
CBWD3-213ENST00000618217 RAB14P61106 215 aa17■□□□□ 0.31
CBWD3-213ENST00000618217 FAM74A1Q5RGS3 127 aa17■□□□□ 0.31
CBWD3-213ENST00000618217 SIGLEC15Q6ZMC9 328 aa17■□□□□ 0.31
CBWD3-213ENST00000618217 TMED6Q8WW62 240 aa17■□□□□ 0.31
CBWD3-213ENST00000618217 SMAD5-AS1Q9Y6J3 95 aa17■□□□□ 0.31
CBWD3-213ENST00000618217 TRAV5A0A0B4J249 113 aa16.99■□□□□ 0.31
CBWD3-213ENST00000618217 HELTA6NFD8 242 aa16.99■□□□□ 0.31
CBWD3-213ENST00000618217 M6PRP20645 277 aa16.99■□□□□ 0.31
CBWD3-213ENST00000618217 C17orf77Q96MU5 243 aa16.99■□□□□ 0.31
CBWD3-213ENST00000618217 SPAG8Q99932 426 aaPredicted RBP16.99■□□□□ 0.31
CBWD3-213ENST00000618217 ZNF256Q9Y2P7 627 aaPredicted RBP16.99■□□□□ 0.31
CBWD3-213ENST00000618217 MRPS12O15235 138 aaKnown RBP16.99■□□□□ 0.31
CBWD3-213ENST00000618217 RAB2AP61019 212 aa16.99■□□□□ 0.31
CBWD3-213ENST00000618217 ACOT6Q3I5F7 207 aaPredicted RBP16.99■□□□□ 0.31
CBWD3-213ENST00000618217 FAM78BQ5VT40 261 aa16.99■□□□□ 0.31
CBWD3-213ENST00000618217 SPATA31B1PQ5VZV4 182 aa16.99■□□□□ 0.31
CBWD3-213ENST00000618217 GPR82Q96P67 336 aa16.99■□□□□ 0.31
CBWD3-213ENST00000618217 MS4A6AQ9H2W1 248 aa16.99■□□□□ 0.31
CBWD3-213ENST00000618217 ZMAT5Q9UDW3 170 aaKnown RBP16.99■□□□□ 0.31
CBWD3-213ENST00000618217 GP9P14770 177 aa16.98■□□□□ 0.31
CBWD3-213ENST00000618217 RPL11P62913 178 aaKnown RBP16.98■□□□□ 0.31
CBWD3-213ENST00000618217 NDUFA5Q16718 116 aa16.98■□□□□ 0.31
CBWD3-213ENST00000618217 CLLU1Q5K131 121 aa16.98■□□□□ 0.31
CBWD3-213ENST00000618217 MIR17HGQ75NE6 70 aa16.98■□□□□ 0.31
CBWD3-213ENST00000618217 RNF24Q9Y225 148 aa16.98■□□□□ 0.31
CBWD3-213ENST00000618217 FUT9Q9Y231 359 aa16.98■□□□□ 0.31
CBWD3-213ENST00000618217 IGKV3-7A0A075B6H7 116 aa16.97■□□□□ 0.31
CBWD3-213ENST00000618217 GUCA2BQ16661 112 aa16.97■□□□□ 0.31
CBWD3-213ENST00000618217 EIF5AL1Q6IS14 154 aaKnown RBP16.97■□□□□ 0.31
CBWD3-213ENST00000618217 GBGT1Q8N5D6 347 aa16.97■□□□□ 0.31
CBWD3-213ENST00000618217 RPP25LQ8N5L8 163 aaKnown RBP16.97■□□□□ 0.31
CBWD3-213ENST00000618217 FAM167A-AS1Q96KT0 104 aa16.97■□□□□ 0.31
CBWD3-213ENST00000618217 MRPL32Q9BYC8 188 aaKnown RBP16.97■□□□□ 0.31
CBWD3-213ENST00000618217 PLA2G2EQ9NZK7 142 aa16.97■□□□□ 0.31
CBWD3-213ENST00000618217 DNAH3Q8TD57 4116 aa16.97■□□□□ 0.31
CBWD3-213ENST00000618217 SEC11BP0C7V7 166 aa16.96■□□□□ 0.31
CBWD3-213ENST00000618217 RPL7P18124 248 aaKnown RBP16.96■□□□□ 0.31
CBWD3-213ENST00000618217 OR10G4Q8NGN3 311 aa16.96■□□□□ 0.31
CBWD3-213ENST00000618217 OR10G9Q8NGN4 311 aa16.96■□□□□ 0.31
CBWD3-213ENST00000618217 OR10G7Q8NGN6 311 aa16.96■□□□□ 0.31
CBWD3-213ENST00000618217 DCANP1Q8TF63 244 aa16.96■□□□□ 0.31
CBWD3-213ENST00000618217 RPRMQ9NS64 109 aa16.96■□□□□ 0.31
CBWD3-213ENST00000618217 TRAV2A0A0B4J234 112 aa16.96■□□□□ 0.3
CBWD3-213ENST00000618217 MBP02144 154 aa16.96■□□□□ 0.3
CBWD3-213ENST00000618217 GALR1P47211 349 aa16.96■□□□□ 0.3
CBWD3-213ENST00000618217 RHOBP62745 196 aa16.96■□□□□ 0.3
CBWD3-213ENST00000618217 STXBP6Q8NFX7 210 aa16.96■□□□□ 0.3
CBWD3-213ENST00000618217 SLC25A2Q9BXI2 301 aa16.96■□□□□ 0.3
CBWD3-213ENST00000618217 NRN1Q9NPD7 142 aa16.96■□□□□ 0.3
CBWD3-213ENST00000618217 K7EQG2 157 aa16.95■□□□□ 0.3
CBWD3-213ENST00000618217 SLC7A5P1Q8MH63 180 aa16.95■□□□□ 0.3
CBWD3-213ENST00000618217 PRR25Q96S07 402 aa16.95■□□□□ 0.3
CBWD3-213ENST00000618217 PAFAH1B2P68402 229 aa16.94■□□□□ 0.3
CBWD3-213ENST00000618217 TMEM41BQ5BJD5 291 aa16.94■□□□□ 0.3
CBWD3-213ENST00000618217 BPIFA4PQ86YQ2 179 aa16.94■□□□□ 0.3
CBWD3-213ENST00000618217 TMEM14CQ9P0S9 112 aa16.94■□□□□ 0.3
CBWD3-213ENST00000618217 NMBP08949 121 aa16.93■□□□□ 0.3
CBWD3-213ENST00000618217 TFPI2P48307 235 aa16.93■□□□□ 0.3
CBWD3-213ENST00000618217 A0A087X0K7 114 aa16.92■□□□□ 0.3
CBWD3-213ENST00000618217 OR4C46A6NHA9 309 aa16.92■□□□□ 0.3
CBWD3-213ENST00000618217 IGLC2P0DOY2 106 aa16.92■□□□□ 0.3
CBWD3-213ENST00000618217 FAM122CQ6P4D5 195 aa16.92■□□□□ 0.3
CBWD3-213ENST00000618217 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.92■□□□□ 0.3
CBWD3-213ENST00000618217 WFDC3Q8IUB2 231 aa16.92■□□□□ 0.3
CBWD3-213ENST00000618217 Q8N1Y9 231 aa16.92■□□□□ 0.3
CBWD3-213ENST00000618217 DNASE2O00115 360 aaPredicted RBP16.92■□□□□ 0.3
CBWD3-213ENST00000618217 SOCS3O14543 225 aa16.92■□□□□ 0.3
CBWD3-213ENST00000618217 ATP6V1G1O75348 118 aa16.92■□□□□ 0.3
CBWD3-213ENST00000618217 CD7P09564 240 aa16.92■□□□□ 0.3
CBWD3-213ENST00000618217 FAM24BQ8N5W8 94 aa16.92■□□□□ 0.3
CBWD3-213ENST00000618217 ZNF503Q96F45 646 aa16.92■□□□□ 0.3
CBWD3-213ENST00000618217 C19orf73Q9NVV2 129 aa16.92■□□□□ 0.3
CBWD3-213ENST00000618217 A0A1W2PPV4 95 aa16.91■□□□□ 0.3
CBWD3-213ENST00000618217 H3BQ15 152 aa16.91■□□□□ 0.3
CBWD3-213ENST00000618217 EIF3GO75821 320 aaKnown RBP eCLIP16.91■□□□□ 0.3
CBWD3-213ENST00000618217 AKR1C8PQ5T2L2 129 aa16.91■□□□□ 0.3
CBWD3-213ENST00000618217 RNF141Q8WVD5 230 aa16.91■□□□□ 0.3
CBWD3-213ENST00000618217 RAB24Q969Q5 203 aa16.91■□□□□ 0.3
CBWD3-213ENST00000618217 HRH4Q9H3N8 390 aa16.91■□□□□ 0.3
CBWD3-213ENST00000618217 PRB2P02812 416 aaPredicted RBP16.9■□□□□ 0.3
CBWD3-213ENST00000618217 PYYP10082 97 aa16.9■□□□□ 0.3
CBWD3-213ENST00000618217 ATF4P18848 351 aaPredicted RBP16.9■□□□□ 0.3
CBWD3-213ENST00000618217 CDC34P49427 236 aaPredicted RBP16.9■□□□□ 0.3
CBWD3-213ENST00000618217 ZNF726P1Q15940 193 aa16.9■□□□□ 0.3
CBWD3-213ENST00000618217 SSX7Q7RTT5 188 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms