RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 ECSCRQ19T08 205 aa9.79□□□□□ -0.84
CIITA-212ENST00000618207 KIAA1644Q3SXP7 199 aa9.79□□□□□ -0.84
CIITA-212ENST00000618207 SLC25A39Q9BZJ4 359 aaPredicted RBP9.79□□□□□ -0.84
CIITA-212ENST00000618207 ABCA12Q86UK0 2595 aa9.79□□□□□ -0.84
CIITA-212ENST00000618207 NDUFA3O95167 84 aa9.79□□□□□ -0.84
CIITA-212ENST00000618207 Q56UQ5 140 aa9.79□□□□□ -0.84
CIITA-212ENST00000618207 CCDC144NLQ6NUI1 221 aa9.79□□□□□ -0.84
CIITA-212ENST00000618207 MRPL52Q86TS9 123 aaKnown RBP9.79□□□□□ -0.84
CIITA-212ENST00000618207 OR1L6Q8NGR2 347 aa9.79□□□□□ -0.84
CIITA-212ENST00000618207 TMUB1Q9BVT8 246 aa9.79□□□□□ -0.84
CIITA-212ENST00000618207 DOPEY2Q9Y3R5 2298 aa9.79□□□□□ -0.84
CIITA-212ENST00000618207 RPL15P61313 204 aaKnown RBP9.78□□□□□ -0.84
CIITA-212ENST00000618207 BRD3OSQ6XYD6 125 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 Q71RC1 249 aaPredicted RBP9.78□□□□□ -0.84
CIITA-212ENST00000618207 TMEM256Q8N2U0 113 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 NPBQ8NG41 125 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 Q9H3A6 140 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 PTPN13Q12923 2485 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 SNURFLB1AK76 121 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 TYMSP04818 313 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 FCGR2BP31994 310 aaPredicted RBP9.78□□□□□ -0.84
CIITA-212ENST00000618207 TMEM219Q86XT9 240 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 TMEM183AQ8IXX5 376 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 IGF2BP2-AS1Q96M15 143 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 HSPB9Q9BQS6 159 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 ARL2-SNX15V9GYD0 113 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 ANKRD17O75179 2603 aaKnown RBP9.78□□□□□ -0.84
CIITA-212ENST00000618207 OR2T8A6NH00 312 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 GP9P14770 177 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 PVRIGQ6DKI7 326 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 PIP4P2Q8N4L2 257 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 FANCD2OSQ96PS1 177 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 LINC00527Q9UJ94 153 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 EPDR1Q9UM22 224 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 ZANQ9Y493 2812 aa9.78□□□□□ -0.84
CIITA-212ENST00000618207 AMBPP02760 352 aa9.77□□□□□ -0.85
CIITA-212ENST00000618207 PAX2Q02962 417 aa9.77□□□□□ -0.85
CIITA-212ENST00000618207 JOSD1Q15040 202 aaPredicted RBP9.77□□□□□ -0.85
CIITA-212ENST00000618207 ZNF562Q6V9R5 426 aa9.77□□□□□ -0.85
CIITA-212ENST00000618207 CDC42EP3Q9UKI2 254 aa9.77□□□□□ -0.85
CIITA-212ENST00000618207 LINC01548A6NM66 108 aa9.77□□□□□ -0.85
CIITA-212ENST00000618207 NUPR1O60356 82 aa9.77□□□□□ -0.85
CIITA-212ENST00000618207 NDUFB8O95169 186 aa9.77□□□□□ -0.85
CIITA-212ENST00000618207 GCGP01275 180 aa9.77□□□□□ -0.85
CIITA-212ENST00000618207 BTF3L4Q96K17 158 aa9.77□□□□□ -0.85
CIITA-212ENST00000618207 CCL19Q99731 98 aa9.77□□□□□ -0.85
CIITA-212ENST00000618207 VPS25Q9BRG1 176 aa9.77□□□□□ -0.85
CIITA-212ENST00000618207 MRPL18Q9H0U6 180 aaKnown RBP9.77□□□□□ -0.85
CIITA-212ENST00000618207 ZNF586Q9NXT0 402 aa9.77□□□□□ -0.85
CIITA-212ENST00000618207 SOX21Q9Y651 276 aaPredicted RBP9.77□□□□□ -0.85
CIITA-212ENST00000618207 IGHV7-81A0A0B4J1V7 117 aa9.76□□□□□ -0.85
CIITA-212ENST00000618207 TXN2Q99757 166 aa9.76□□□□□ -0.85
CIITA-212ENST00000618207 NAT8BQ9UHF3 227 aa9.76□□□□□ -0.85
CIITA-212ENST00000618207 IGHV4-61A0A0C4DH41 118 aa9.76□□□□□ -0.85
CIITA-212ENST00000618207 C20orf202A1L168 122 aa9.76□□□□□ -0.85
CIITA-212ENST00000618207 FAM106CPP0CH98 169 aa9.76□□□□□ -0.85
CIITA-212ENST00000618207 Q8N9W7 124 aa9.76□□□□□ -0.85
CIITA-212ENST00000618207 STXBP6Q8NFX7 210 aa9.76□□□□□ -0.85
CIITA-212ENST00000618207 RNF125Q96EQ8 232 aa9.76□□□□□ -0.85
CIITA-212ENST00000618207 MS4A10Q96PG2 267 aa9.76□□□□□ -0.85
CIITA-212ENST00000618207 CLEC5AQ9NY25 188 aa9.76□□□□□ -0.85
CIITA-212ENST00000618207 ZFP30Q9Y2G7 519 aa9.76□□□□□ -0.85
CIITA-212ENST00000618207 G3V318 75 aa9.75□□□□□ -0.85
CIITA-212ENST00000618207 PTTG1IPP53801 180 aa9.75□□□□□ -0.85
CIITA-212ENST00000618207 S100A7AQ86SG5 101 aa9.75□□□□□ -0.85
CIITA-212ENST00000618207 ZNF491Q8N8L2 437 aa9.75□□□□□ -0.85
CIITA-212ENST00000618207 LY96Q9Y6Y9 160 aa9.75□□□□□ -0.85
CIITA-212ENST00000618207 F2Z2F3 143 aa9.75□□□□□ -0.85
CIITA-212ENST00000618207 GZMBP10144 247 aa9.75□□□□□ -0.85
CIITA-212ENST00000618207 CD33P20138 364 aa9.75□□□□□ -0.85
CIITA-212ENST00000618207 UBE2E1P51965 193 aa9.75□□□□□ -0.85
CIITA-212ENST00000618207 ATP5J2P56134 94 aa9.75□□□□□ -0.85
CIITA-212ENST00000618207 MINOS1Q5TGZ0 78 aa9.75□□□□□ -0.85
CIITA-212ENST00000618207 UNQ5815/PRO19632Q6UWF5 114 aa9.75□□□□□ -0.85
CIITA-212ENST00000618207 PRSS57Q6UWY2 283 aa9.75□□□□□ -0.85
CIITA-212ENST00000618207 GOLT1AQ6ZVE7 132 aa9.75□□□□□ -0.85
CIITA-212ENST00000618207 MINOS1-NBL1R4GNA1 71 aa9.75□□□□□ -0.85
CIITA-212ENST00000618207 TRAV40A0A0B4J280 105 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 CMTM2Q8TAZ6 248 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 OSTCQ9NRP0 149 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 C21orf62Q9NYP8 219 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 IGLV11-55A0A075B6I3 123 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 CENPVL3A0A0U1RRI6 287 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 M0R3E3 92 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 OVOL3O00110 214 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 ATP6V0E1O15342 81 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 MYCNOSP40205 109 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 PDLIM4P50479 330 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 MFAP4P55083 255 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 LINC00322Q6ZN03 302 aaPredicted RBP9.74□□□□□ -0.85
CIITA-212ENST00000618207 PRNTQ86SH4 94 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 FBXL7Q9UJT9 491 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 IGHV3OR16-13A0A075B7E8 117 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 IGHV3-74A0A0B4J1X5 117 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 A1L4Q6 167 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 EGR2P11161 476 aaPredicted RBP9.74□□□□□ -0.85
CIITA-212ENST00000618207 Q8N6K4 173 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 AJUBAQ96IF1 538 aa9.74□□□□□ -0.85
CIITA-212ENST00000618207 MRPL27Q9P0M9 148 aaKnown RBP9.74□□□□□ -0.85
CIITA-212ENST00000618207 TLN2Q9Y4G6 2542 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms