RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	TMEM249	Q2WGJ8	235 aa		5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	ZNF362	Q5T0B9	420 aa	Predicted RBP	5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	RUSC1-AS1	Q66K80	236 aa		5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	WFDC1	Q9HC57	220 aa		5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	IGKV1D-17	A0A075B6S4	117 aa		5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	CFHR2	P36980	270 aa		5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	TMEM14EP	Q6UXP3	125 aa		5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	ZNF492	Q9P255	531 aa		5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	SHISA3	A0PJX4	238 aa		5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	LDLRAD4	O15165	306 aa		5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	FGF16	O43320	207 aa		5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	LHB	P01229	141 aa		5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	VWC2	Q2TAL6	325 aa		5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	CR1L	Q2VPA4	569 aa		5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	C10orf55	Q5SWW7	151 aa		5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	PRIMA1	Q86XR5	153 aa		5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	C1QL4	Q86Z23	238 aa		5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271		A0A0U1RRA0	63 aa		5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	SPANXD	Q9BXN6	97 aa		5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	PNRC2	Q9NPJ4	139 aa	Known RBP	5.98	□□□□□ -1.45
PCDH15-231	ENST00000617271	ELANE	P08246	267 aa		5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	NPC2	P61916	151 aa		5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	HIST1H4A	P62805	103 aa	Known RBP	5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	NCR2	O95944	276 aa		5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	C2orf82	Q6UX34	121 aa		5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	LYPD2	Q6UXB3	125 aa		5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	SPX	Q9BT56	116 aa		5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	TRAV13-1	A0A0B4J241	112 aa		5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	ATP6V0E1	O15342	81 aa		5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	TBX6	O95947	436 aa	Predicted RBP	5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	RNASE2	P10153	161 aa	Known RBP	5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	GLRX5	Q86SX6	157 aa		5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	TMEM243	Q9BU79	118 aa		5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	LIME1	Q9H400	295 aa		5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	MRPL27	Q9P0M9	148 aa	Known RBP	5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	IGKV1-27	A0A075B6S5	117 aa		5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	RIPPLY3	P57055	190 aa		5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	SRSF4	Q08170	494 aa	Known RBP	5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	LHFPL1	Q86WI0	220 aa		5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	C14orf178	Q8N769	122 aa	Predicted RBP	5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	TSSC4	Q9Y5U2	329 aa	Predicted RBP	5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	IGHV1OR15-1	A0A075B7D0	117 aa		5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	EFNA2	O43921	213 aa		5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	CRIPAK	Q8N1N5	446 aa		5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	FNDC4	Q9H6D8	234 aa	Predicted RBP	5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	ZNF319	Q9P2F9	582 aa		5.97	□□□□□ -1.45
PCDH15-231	ENST00000617271	CFP	P27918	469 aa		5.96	□□□□□ -1.45
PCDH15-231	ENST00000617271	ZNF833P	Q6ZTB9	187 aa		5.96	□□□□□ -1.45
PCDH15-231	ENST00000617271	SELL	P14151	372 aa		5.96	□□□□□ -1.46
PCDH15-231	ENST00000617271	XIRP1	Q702N8	1843 aa	Known RBP	5.96	□□□□□ -1.46
PCDH15-231	ENST00000617271		A0A1B0GUS0	222 aa		5.96	□□□□□ -1.46
PCDH15-231	ENST00000617271	GAGE12J	A6NER3	117 aa		5.96	□□□□□ -1.46
PCDH15-231	ENST00000617271	GAGE1	Q13065	139 aa		5.96	□□□□□ -1.46
PCDH15-231	ENST00000617271	GAGE4	Q13068	117 aa		5.96	□□□□□ -1.46
PCDH15-231	ENST00000617271	GAGE5	Q13069	117 aa		5.96	□□□□□ -1.46
PCDH15-231	ENST00000617271	PMVK	Q15126	192 aa		5.96	□□□□□ -1.46
PCDH15-231	ENST00000617271	VSIR	Q9H7M9	311 aa		5.96	□□□□□ -1.46
PCDH15-231	ENST00000617271	C9orf66	Q5T8R8	295 aa		5.96	□□□□□ -1.46
PCDH15-231	ENST00000617271	CGB7	P0DN87	165 aa		5.96	□□□□□ -1.46
PCDH15-231	ENST00000617271	SIGMAR1	Q99720	223 aa		5.96	□□□□□ -1.46
PCDH15-231	ENST00000617271	PFN1	P07737	140 aa	Known RBP	5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271	LY6G6F	Q5SQ64	297 aa		5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271	LINC00311	Q8N616	119 aa		5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271	UBE2W	Q96B02	151 aa		5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271	TRBV24-1	A0A075B6N3	115 aa		5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271	TRAV3	A0A0B4J244	114 aa		5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271	BTC	P35070	178 aa		5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271	FOXG1	P55316	489 aa	Predicted RBP	5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271	PRSS46	E5RG02	174 aa		5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271	SOCS3	O14543	225 aa		5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271	IGKV1-5	P01602	117 aa		5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271	ZFAND6	Q6FIF0	208 aa		5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271	MRPL52	Q86TS9	123 aa	Known RBP	5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271	NUP35	Q8NFH5	326 aa		5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271		A0A087WWL8	130 aa		5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271		Q8TAT8	98 aa		5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271	IGKV1D-8	A0A087WSZ0	117 aa		5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271	FAM231B	A6NCW3	169 aa		5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271	NBL1	P41271	181 aa		5.95	□□□□□ -1.46
PCDH15-231	ENST00000617271	ZFC3H1	O60293	1989 aa	Known RBP	5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271	SPAG17	Q6Q759	2223 aa		5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271	REG4	Q9BYZ8	158 aa		5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271	XCL2	Q9UBD3	114 aa		5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271	TEX36	Q5VZQ5	186 aa		5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271	ZNF114	Q8NC26	417 aa		5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271	NDUFAF3	Q9BU61	184 aa		5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271	ESD	P10768	282 aa		5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271	SH2D6	Q7Z4S9	175 aa		5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271	TMEM256	Q8N2U0	113 aa		5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271		Q8N8P6	123 aa		5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271	ZNF48	Q96MX3	618 aa	Predicted RBP	5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271	SPANXA1	Q9NS26	97 aa		5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271	LINC00473	A8K010	186 aa		5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271	CDKN1B	P46527	198 aa		5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271	GFI1	Q99684	422 aa		5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271	IGHV1-24	A0A0C4DH33	117 aa		5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271	HS3ST6	Q96QI5	342 aa		5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271	TMEM14C	Q9P0S9	112 aa		5.94	□□□□□ -1.46
PCDH15-231	ENST00000617271	SIPA1L1	O43166	1804 aa		5.93	□□□□□ -1.46
PCDH15-231	ENST00000617271	C1orf122	Q6ZSJ8	110 aa		5.93	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms