RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 SPANXDQ9BXN6 97 aa3.75□□□□□ -1.81
CHD9-221ENST00000615216 REG4Q9BYZ8 158 aa3.75□□□□□ -1.81
CHD9-221ENST00000615216 NUP210LQ5VU65 1888 aa3.75□□□□□ -1.81
CHD9-221ENST00000615216 CDKN1AP38936 164 aa3.75□□□□□ -1.81
CHD9-221ENST00000615216 CT83Q5H943 113 aa3.75□□□□□ -1.81
CHD9-221ENST00000615216 MDS2Q8NDY4 140 aa3.75□□□□□ -1.81
CHD9-221ENST00000615216 TRAV12-3A0A0B4J271 114 aa3.75□□□□□ -1.81
CHD9-221ENST00000615216 TRAV40A0A0B4J280 105 aa3.75□□□□□ -1.81
CHD9-221ENST00000615216 PSG1P11464 419 aa3.75□□□□□ -1.81
CHD9-221ENST00000615216 VSIRQ9H7M9 311 aa3.75□□□□□ -1.81
CHD9-221ENST00000615216 ZNF319Q9P2F9 582 aa3.75□□□□□ -1.81
CHD9-221ENST00000615216 TMEM105Q8N8V8 129 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 PMS2P5A8MQ11 134 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 CXCL1P09341 107 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 MST1P26927 711 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 ASCL4Q6XD76 172 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 CD177Q8N6Q3 437 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 ST6GALNAC3Q8NDV1 305 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 ZNF492Q9P255 531 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 A0A087WV48 116 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 ZNF672Q499Z4 452 aaPredicted RBP3.74□□□□□ -1.81
CHD9-221ENST00000615216 IGKV1-5P01602 117 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 RPL15P61313 204 aaKnown RBP3.74□□□□□ -1.81
CHD9-221ENST00000615216 GAGE2EQ4V326 116 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 CHCHD5Q9BSY4 110 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 SCRT1Q9BWW7 348 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 NCOR1P1Q9H4R4 102 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 GAGE2DQ9UEU5 116 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 IGHV3OR16-8A0A075B7F1 116 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 MLNRO43193 412 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 TMEM155Q4W5P6 130 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 SPATA31B1PQ5VZV4 182 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 LYZL1Q6UWQ5 148 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 B4DSR2 109 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 CDK2AP2O75956 126 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 GATA3P23771 443 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 LINC00158P58513 81 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 RPL36AP83881 106 aaKnown RBP3.74□□□□□ -1.81
CHD9-221ENST00000615216 EXOC3-AS1Q8N2X6 119 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 RPL36ALQ969Q0 106 aaKnown RBP3.74□□□□□ -1.81
CHD9-221ENST00000615216 MEGF9Q9H1U4 602 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 ADAMTS9Q9P2N4 1935 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 NOTCH4Q99466 2003 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 MYMXA0A1B0GTQ4 84 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 FAM231BA6NCW3 169 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 SYS1-DBNDD2H3BUS1 97 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 NDUFS6O75380 124 aaKnown RBP3.74□□□□□ -1.81
CHD9-221ENST00000615216 HTN3P15516 51 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 LCN12Q6JVE5 192 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 GLRX5Q86SX6 157 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 Q86TA4 180 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 PRDM6Q9NQX0 595 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 TRAV5A0A0B4J249 113 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 MBD3L4A6NDZ8 208 aaPredicted RBP3.74□□□□□ -1.81
CHD9-221ENST00000615216 MBD3L3A6NE82 208 aaPredicted RBP3.74□□□□□ -1.81
CHD9-221ENST00000615216 MBD3L5A6NJ08 208 aaPredicted RBP3.74□□□□□ -1.81
CHD9-221ENST00000615216 NDUFB8O95169 186 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 CD59P13987 128 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 MBD3L2Q8NHZ7 208 aaPredicted RBP3.74□□□□□ -1.81
CHD9-221ENST00000615216 FGFBP3Q8TAT2 258 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 TMEM141Q96I45 108 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 DNAJC30Q96LL9 226 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 SIGLEC9Q9Y336 463 aa3.74□□□□□ -1.81
CHD9-221ENST00000615216 ESDP10768 282 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 SHANK2-AS3Q9BTD1 123 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 NPIPB5A8MRT5 1133 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 FOXF2Q12947 444 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 CST9LQ9H4G1 147 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 NDUFS8O00217 210 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 IGKV3D-20A0A0C4DH25 116 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 SSBP2P81877 361 aaPredicted RBP3.73□□□□□ -1.81
CHD9-221ENST00000615216 NEGR1Q7Z3B1 354 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 BOD1L2Q8IYS8 172 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 Q8TCH9 128 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 SRRM4A7MD48 611 aaKnown RBP3.73□□□□□ -1.81
CHD9-221ENST00000615216 SLC25A16P16260 332 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 LINC01356Q8N9X3 169 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 CSTL1Q9H114 145 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 RFNGQ9Y644 331 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 POLEQ07864 2286 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 TDGF1P3P51864 188 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 B3GALT5-AS1P59052 145 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 SRSF2Q01130 221 aaKnown RBP3.73□□□□□ -1.81
CHD9-221ENST00000615216 GUSBP1Q15486 140 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 RNF166Q96A37 237 aaPredicted RBP3.73□□□□□ -1.81
CHD9-221ENST00000615216 TIMM21Q9BVV7 248 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 TMEM14BQ9NUH8 114 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 TMEM8BA6NDV4 472 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 C15orf62A8K5M9 175 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 ZNF562Q6V9R5 426 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 TRPT1Q86TN4 253 aaKnown RBP3.73□□□□□ -1.81
CHD9-221ENST00000615216 CHAC1Q9BUX1 264 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 JPT2Q9H910 190 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 A0A0G2JNJ9 132 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 F8WEM9 126 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 SAP30O75446 220 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 Q9UFV3 132 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 KLF12Q9Y4X4 402 aa3.73□□□□□ -1.81
CHD9-221ENST00000615216 GATA4P43694 442 aa3.72□□□□□ -1.81
CHD9-221ENST00000615216 CD300EQ496F6 205 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms