RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 PEF1Q9UBV8 284 aaKnown RBP13.19□□□□□ -0.3
CNOT3-208ENST00000613073 NBEAP1P0C6P0 100 aa13.18□□□□□ -0.3
CNOT3-208ENST00000613073 FAM120AOSQ5T036 256 aa13.18□□□□□ -0.3
CNOT3-208ENST00000613073 OR1N2Q8NGR9 330 aa13.18□□□□□ -0.3
CNOT3-208ENST00000613073 RAB1BQ9H0U4 201 aa13.18□□□□□ -0.3
CNOT3-208ENST00000613073 HIGD1CA8MV81 97 aa13.18□□□□□ -0.3
CNOT3-208ENST00000613073 CD5LO43866 347 aa13.18□□□□□ -0.3
CNOT3-208ENST00000613073 LEPROTL1O95214 131 aa13.18□□□□□ -0.3
CNOT3-208ENST00000613073 C8orf31Q8N9H6 132 aa13.18□□□□□ -0.3
CNOT3-208ENST00000613073 NDUFA4L2Q9NRX3 87 aa13.18□□□□□ -0.3
CNOT3-208ENST00000613073 IGHV1-24A0A0C4DH33 117 aa13.17□□□□□ -0.3
CNOT3-208ENST00000613073 GNG7O60262 68 aa13.17□□□□□ -0.3
CNOT3-208ENST00000613073 IGLV2-23P01705 113 aa13.17□□□□□ -0.3
CNOT3-208ENST00000613073 OR1L8Q8NGR8 309 aa13.17□□□□□ -0.3
CNOT3-208ENST00000613073 PRORYQ9H606 182 aa13.17□□□□□ -0.3
CNOT3-208ENST00000613073 ONECUT1Q9UBC0 465 aa13.17□□□□□ -0.3
CNOT3-208ENST00000613073 IGHV3-48P01763 117 aa13.17□□□□□ -0.3
CNOT3-208ENST00000613073 RNASE2P10153 161 aaKnown RBP13.17□□□□□ -0.3
CNOT3-208ENST00000613073 ZNF137PP52743 207 aa13.17□□□□□ -0.3
CNOT3-208ENST00000613073 IGF2BP2-AS1Q96M15 143 aa13.17□□□□□ -0.3
CNOT3-208ENST00000613073 IGKV1OR2-108A0A075B7D4 117 aa13.16□□□□□ -0.3
CNOT3-208ENST00000613073 APELAP0DMC3 54 aa13.16□□□□□ -0.3
CNOT3-208ENST00000613073 CNTFRP26992 372 aa13.16□□□□□ -0.3
CNOT3-208ENST00000613073 RAB31Q13636 194 aa13.16□□□□□ -0.3
CNOT3-208ENST00000613073 CLUHP3Q96NS8 147 aa13.16□□□□□ -0.3
CNOT3-208ENST00000613073 TRAV5A0A0B4J249 113 aa13.16□□□□□ -0.3
CNOT3-208ENST00000613073 VWC2LB2RUY7 222 aa13.16□□□□□ -0.3
CNOT3-208ENST00000613073 GPR183P32249 361 aa13.16□□□□□ -0.3
CNOT3-208ENST00000613073 TCF24Q7RTU0 167 aa13.16□□□□□ -0.3
CNOT3-208ENST00000613073 TMEM167AQ8TBQ9 72 aa13.16□□□□□ -0.3
CNOT3-208ENST00000613073 TMEM167BQ9NRX6 74 aa13.16□□□□□ -0.3
CNOT3-208ENST00000613073 HILPDAQ9Y5L2 63 aa13.16□□□□□ -0.3
CNOT3-208ENST00000613073 CFAP46Q8IYW2 2715 aa13.16□□□□□ -0.3
CNOT3-208ENST00000613073 CACNA1AO00555 2505 aa13.15□□□□□ -0.3
CNOT3-208ENST00000613073 A0A1W2PPR1 153 aa13.15□□□□□ -0.3
CNOT3-208ENST00000613073 CGB1A6NKQ9 187 aa13.15□□□□□ -0.3
CNOT3-208ENST00000613073 PAX2Q02962 417 aa13.15□□□□□ -0.3
CNOT3-208ENST00000613073 WT1-ASQ06250 92 aa13.15□□□□□ -0.3
CNOT3-208ENST00000613073 SCRT2Q9NQ03 307 aa13.15□□□□□ -0.3
CNOT3-208ENST00000613073 ERHP84090 104 aaKnown RBP13.15□□□□□ -0.3
CNOT3-208ENST00000613073 C2orf83Q53S99 150 aa13.15□□□□□ -0.3
CNOT3-208ENST00000613073 VSTM2AQ8TAG5 236 aa13.15□□□□□ -0.3
CNOT3-208ENST00000613073 AP1S3Q96PC3 154 aa13.15□□□□□ -0.3
CNOT3-208ENST00000613073 JMJD8Q96S16 334 aa13.15□□□□□ -0.3
CNOT3-208ENST00000613073 TMEM191AQ9H0A3 160 aa13.15□□□□□ -0.3
CNOT3-208ENST00000613073 INSIG2Q9Y5U4 225 aa13.15□□□□□ -0.3
CNOT3-208ENST00000613073 WNK2Q9Y3S1 2297 aa13.15□□□□□ -0.3
CNOT3-208ENST00000613073 C22orf46C9J442 243 aa13.15□□□□□ -0.31
CNOT3-208ENST00000613073 H3BUT2 72 aa13.15□□□□□ -0.31
CNOT3-208ENST00000613073 IGLV1-47P01700 117 aa13.15□□□□□ -0.31
CNOT3-208ENST00000613073 CSN3P07498 182 aa13.15□□□□□ -0.31
CNOT3-208ENST00000613073 MC5RP33032 325 aa13.15□□□□□ -0.31
CNOT3-208ENST00000613073 C5orf17Q8NAS9 161 aa13.15□□□□□ -0.31
CNOT3-208ENST00000613073 IGFBPL1Q8WX77 278 aa13.15□□□□□ -0.31
CNOT3-208ENST00000613073 RAB37Q96AX2 223 aa13.15□□□□□ -0.31
CNOT3-208ENST00000613073 ABCA1O95477 2261 aa13.14□□□□□ -0.31
CNOT3-208ENST00000613073 VPS13CQ709C8 3753 aa13.14□□□□□ -0.31
CNOT3-208ENST00000613073 BUB1B-PAK6H3BSN5 160 aa13.14□□□□□ -0.31
CNOT3-208ENST00000613073 ARF6P62330 175 aa13.14□□□□□ -0.31
CNOT3-208ENST00000613073 KLF5Q13887 457 aaPredicted RBP13.14□□□□□ -0.31
CNOT3-208ENST00000613073 PRR20EP86478 221 aa13.14□□□□□ -0.31
CNOT3-208ENST00000613073 PRR20CP86479 221 aa13.14□□□□□ -0.31
CNOT3-208ENST00000613073 PRR20DP86480 221 aa13.14□□□□□ -0.31
CNOT3-208ENST00000613073 PRR20BP86481 221 aa13.14□□□□□ -0.31
CNOT3-208ENST00000613073 PRR20AP86496 221 aa13.14□□□□□ -0.31
CNOT3-208ENST00000613073 HIST1H1AQ02539 215 aaPredicted RBP13.14□□□□□ -0.31
CNOT3-208ENST00000613073 VMA21Q3ZAQ7 101 aa13.14□□□□□ -0.31
CNOT3-208ENST00000613073 MORN5Q5VZ52 161 aa13.14□□□□□ -0.31
CNOT3-208ENST00000613073 C11orf71Q6IPW1 123 aa13.14□□□□□ -0.31
CNOT3-208ENST00000613073 A0A1W2PRE2 83 aa13.13□□□□□ -0.31
CNOT3-208ENST00000613073 DLL1O00548 723 aa13.13□□□□□ -0.31
CNOT3-208ENST00000613073 HTR1DP28221 377 aa13.13□□□□□ -0.31
CNOT3-208ENST00000613073 TMEM116Q8NCL8 245 aa13.13□□□□□ -0.31
CNOT3-208ENST00000613073 IGHV1-3A0A0C4DH29 117 aa13.13□□□□□ -0.31
CNOT3-208ENST00000613073 G3V4G9 280 aa13.13□□□□□ -0.31
CNOT3-208ENST00000613073 NDUFS7O75251 213 aa13.13□□□□□ -0.31
CNOT3-208ENST00000613073 TIMD4Q96H15 378 aa13.13□□□□□ -0.31
CNOT3-208ENST00000613073 GNLYP22749 145 aa13.12□□□□□ -0.31
CNOT3-208ENST00000613073 UBE2L3P68036 154 aaKnown RBP13.12□□□□□ -0.31
CNOT3-208ENST00000613073 CD69Q07108 199 aa13.12□□□□□ -0.31
CNOT3-208ENST00000613073 TEX45Q8NA69 505 aa13.12□□□□□ -0.31
CNOT3-208ENST00000613073 PYYP10082 97 aa13.12□□□□□ -0.31
CNOT3-208ENST00000613073 GNG5P63218 68 aa13.12□□□□□ -0.31
CNOT3-208ENST00000613073 MRGPRG-AS1Q2M3A8 158 aa13.12□□□□□ -0.31
CNOT3-208ENST00000613073 OR4A5Q8NH83 315 aa13.12□□□□□ -0.31
CNOT3-208ENST00000613073 RPEQ96AT9 228 aa13.12□□□□□ -0.31
CNOT3-208ENST00000613073 MBD6Q96DN6 1003 aa13.12□□□□□ -0.31
CNOT3-208ENST00000613073 A0A1W2PPI3 338 aa13.11□□□□□ -0.31
CNOT3-208ENST00000613073 A0A1W2PRD5 423 aa13.11□□□□□ -0.31
CNOT3-208ENST00000613073 A0A1W2PRF3 423 aa13.11□□□□□ -0.31
CNOT3-208ENST00000613073 A0A1W2PRM7 423 aa13.11□□□□□ -0.31
CNOT3-208ENST00000613073 LIPFP07098 398 aa13.11□□□□□ -0.31
CNOT3-208ENST00000613073 SSBP2P81877 361 aaPredicted RBP13.11□□□□□ -0.31
CNOT3-208ENST00000613073 HCP5Q6MZN7 132 aa13.11□□□□□ -0.31
CNOT3-208ENST00000613073 WIPF2Q8TF74 440 aaPredicted RBP13.11□□□□□ -0.31
CNOT3-208ENST00000613073 LGALS7P47929 136 aa13.11□□□□□ -0.31
CNOT3-208ENST00000613073 C2orf91Q6ZV80 131 aa13.11□□□□□ -0.31
CNOT3-208ENST00000613073 BPIFA4PQ86YQ2 179 aa13.11□□□□□ -0.31
CNOT3-208ENST00000613073 TNFRSF14Q92956 283 aa13.11□□□□□ -0.31
CNOT3-208ENST00000613073 GRAMD2BQ96HH9 432 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms