RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ASCL2Q99929 193 aa5.84□□□□□ -1.47
CSDE1-218ENST00000610726 AP5S1Q9NUS5 200 aa5.84□□□□□ -1.47
CSDE1-218ENST00000610726 DSCAMO60469 2012 aa5.84□□□□□ -1.47
CSDE1-218ENST00000610726 SIGLEC15Q6ZMC9 328 aa5.84□□□□□ -1.47
CSDE1-218ENST00000610726 Q8TAT8 98 aa5.84□□□□□ -1.47
CSDE1-218ENST00000610726 OSTCQ9NRP0 149 aa5.84□□□□□ -1.47
CSDE1-218ENST00000610726 SORL1Q92673 2214 aa5.84□□□□□ -1.47
CSDE1-218ENST00000610726 CHD3Q12873 2000 aaKnown RBP5.84□□□□□ -1.47
CSDE1-218ENST00000610726 TNRC6AQ8NDV7 1962 aaKnown RBP5.84□□□□□ -1.47
CSDE1-218ENST00000610726 NUDT3O95989 172 aa5.84□□□□□ -1.48
CSDE1-218ENST00000610726 TCRAP04437 139 aa5.84□□□□□ -1.48
CSDE1-218ENST00000610726 CXCL1P09341 107 aa5.84□□□□□ -1.48
CSDE1-218ENST00000610726 ZNF688P0C7X2 276 aa5.84□□□□□ -1.48
CSDE1-218ENST00000610726 ASIPP42127 132 aa5.84□□□□□ -1.48
CSDE1-218ENST00000610726 NSUN5P1Q3KNT7 163 aa5.84□□□□□ -1.48
CSDE1-218ENST00000610726 FAM19A2Q8N3H0 131 aa5.84□□□□□ -1.48
CSDE1-218ENST00000610726 PIP4P2Q8N4L2 257 aa5.84□□□□□ -1.48
CSDE1-218ENST00000610726 CDC42EP3Q9UKI2 254 aa5.84□□□□□ -1.48
CSDE1-218ENST00000610726 ZFP30Q9Y2G7 519 aa5.84□□□□□ -1.48
CSDE1-218ENST00000610726 ARHGAP21Q5T5U3 1957 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 OVOL3O00110 214 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 NMUP48645 174 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 GUSBP1Q15486 140 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 PSMG4Q5JS54 123 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 PEMTQ9UBM1 199 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 IGHV4-61A0A0C4DH41 118 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 IZUMO1RA6ND01 250 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 IGHV2-5P01817 119 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 NUTF2P61970 127 aaKnown RBP5.83□□□□□ -1.48
CSDE1-218ENST00000610726 CR1LQ2VPA4 569 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 NUDT10Q8NFP7 164 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 ZNF502Q8TBZ5 544 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 NUDT11Q96G61 164 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 KCNS1Q96KK3 526 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 PRELID3AQ96N28 172 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 C18orf15Q96N68 181 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 IFITM10A6NMD0 228 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 Q1RN00 199 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 FAM90A2PQ658T7 463 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 TMEM183AQ8IXX5 376 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 CBY3A6NI87 242 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 COLCA2A8K830 154 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 CD7P09564 240 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 TMEM97Q5BJF2 176 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 OR10AG1Q8NH19 301 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 DUX3Q96PT4 197 aa5.83□□□□□ -1.48
CSDE1-218ENST00000610726 ARHGAP32A7KAX9 2087 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 POLQO75417 2590 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 TRBV7-1A0A0A6YYK4 115 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 A0A1B0GW64 132 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 EMP1P54849 157 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 ZNF726P1Q15940 193 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 FAM120AOSQ5T036 256 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 LCNL1Q6ZST4 164 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 Q71RC1 249 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-218ENST00000610726 LINC01587Q99440 93 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 IGHV4-30-2A0A087WSY4 118 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 HIST1H2BKO60814 126 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 IGHV4-39P01824 125 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 HIST1H2BJP06899 126 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 HIST1H2BOP23527 126 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 GATA3P23771 443 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 HIST1H2BBP33778 126 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 HIST1H2BDP58876 126 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 HIST1H2BCP62807 126 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 HIST2H2BEQ16778 126 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-218ENST00000610726 IL17RELQ6ZVW7 336 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 REC114Q7Z4M0 266 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 HIST1H2BHQ93079 126 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 JMJD8Q96S16 334 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 HIST1H2BNQ99877 126 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 HIST1H2BMQ99879 126 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 PARD6GQ9BYG4 376 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-218ENST00000610726 MTORP42345 2549 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 LRP4O75096 1905 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 FNDC10F2Z333 226 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 TOMM40O96008 361 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 APOHP02749 345 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-218ENST00000610726 CRIP3Q6Q6R5 217 aa5.82□□□□□ -1.48
CSDE1-218ENST00000610726 FNDC4Q9H6D8 234 aaPredicted RBP5.82□□□□□ -1.48
CSDE1-218ENST00000610726 UNC80Q8N2C7 3258 aa5.81□□□□□ -1.48
CSDE1-218ENST00000610726 OR4C46A6NHA9 309 aa5.81□□□□□ -1.48
CSDE1-218ENST00000610726 ADMP35318 185 aa5.81□□□□□ -1.48
CSDE1-218ENST00000610726 SYNJ2BPP57105 145 aa5.81□□□□□ -1.48
CSDE1-218ENST00000610726 PKIAP61925 76 aa5.81□□□□□ -1.48
CSDE1-218ENST00000610726 POU2AF1Q16633 256 aa5.81□□□□□ -1.48
CSDE1-218ENST00000610726 RHPN1-AS1Q9BWJ2 59 aa5.81□□□□□ -1.48
CSDE1-218ENST00000610726 PRRC2AP48634 2157 aaKnown RBP5.81□□□□□ -1.48
CSDE1-218ENST00000610726 NPIPB6E9PJ23 425 aa5.81□□□□□ -1.48
CSDE1-218ENST00000610726 M0R143 59 aa5.81□□□□□ -1.48
CSDE1-218ENST00000610726 SERF1AO75920 110 aa5.81□□□□□ -1.48
CSDE1-218ENST00000610726 FOLR2P14207 255 aa5.81□□□□□ -1.48
CSDE1-218ENST00000610726 KLHL30-AS1Q8NEE0 82 aa5.81□□□□□ -1.48
CSDE1-218ENST00000610726 USMG5Q96IX5 58 aa5.81□□□□□ -1.48
CSDE1-218ENST00000610726 KIR2DL4Q99706 377 aa5.81□□□□□ -1.48
CSDE1-218ENST00000610726 SRSF8Q9BRL6 282 aaKnown RBP5.81□□□□□ -1.48
CSDE1-218ENST00000610726 FN1P02751 2386 aaKnown RBP5.81□□□□□ -1.48
CSDE1-218ENST00000610726 FCN3O75636 299 aa5.81□□□□□ -1.48
CSDE1-218ENST00000610726 HERVK_113P61574 105 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms