RNA–Protein interactions for RNA: ENST00000610356.4

RDH13-223, Transcript of retinol dehydrogenase 13, human

TSL 1 (best) BASIC

Gene RDH13, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDH13-223	ENST00000610356	PLA2G2A	P14555	144 aa		13.33	□□□□□ -0.28
RDH13-223	ENST00000610356	MYCNOS	P40205	109 aa		13.33	□□□□□ -0.28
RDH13-223	ENST00000610356	RAN	P62826	216 aa	Known RBP	13.33	□□□□□ -0.28
RDH13-223	ENST00000610356	ZNF600	Q6ZNG1	722 aa		13.33	□□□□□ -0.28
RDH13-223	ENST00000610356	MAPK1IP1L	Q8NDC0	245 aa		13.33	□□□□□ -0.28
RDH13-223	ENST00000610356		V9GYV3	84 aa		13.33	□□□□□ -0.28
RDH13-223	ENST00000610356	TRAV41	A0A0B4J266	112 aa		13.32	□□□□□ -0.28
RDH13-223	ENST00000610356		M0QZK8	103 aa		13.32	□□□□□ -0.28
RDH13-223	ENST00000610356	CRIP2	P52943	208 aa	Predicted RBP	13.32	□□□□□ -0.28
RDH13-223	ENST00000610356	OSTC	Q9NRP0	149 aa		13.32	□□□□□ -0.28
RDH13-223	ENST00000610356	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.32	□□□□□ -0.28	5e-8	■■■■■ 40
RDH13-223	ENST00000610356	FBN2	P35556	2912 aa		13.32	□□□□□ -0.28
RDH13-223	ENST00000610356		J3QKU1	62 aa		13.31	□□□□□ -0.28
RDH13-223	ENST00000610356	PEX7	O00628	323 aa		13.31	□□□□□ -0.28
RDH13-223	ENST00000610356	ESD	P10768	282 aa		13.31	□□□□□ -0.28
RDH13-223	ENST00000610356	ADM	P35318	185 aa		13.31	□□□□□ -0.28
RDH13-223	ENST00000610356	USF2	Q15853	346 aa	Predicted RBP	13.31	□□□□□ -0.28
RDH13-223	ENST00000610356	RPEL1	Q2QD12	228 aa		13.31	□□□□□ -0.28
RDH13-223	ENST00000610356	ZNF502	Q8TBZ5	544 aa		13.31	□□□□□ -0.28
RDH13-223	ENST00000610356		A8MWP6	167 aa		13.31	□□□□□ -0.28
RDH13-223	ENST00000610356	CTSG	P08311	255 aa		13.31	□□□□□ -0.28
RDH13-223	ENST00000610356	HIST1H1E	P10412	219 aa	Known RBP	13.31	□□□□□ -0.28
RDH13-223	ENST00000610356	IQCJ	Q1A5X6	159 aa		13.31	□□□□□ -0.28
RDH13-223	ENST00000610356	BPIFA4P	Q86YQ2	179 aa		13.31	□□□□□ -0.28
RDH13-223	ENST00000610356	ZNF664	Q8N3J9	261 aa		13.31	□□□□□ -0.28
RDH13-223	ENST00000610356	PRO1933	Q9H354	126 aa		13.31	□□□□□ -0.28
RDH13-223	ENST00000610356	CRYBG3	Q68DQ2	2970 aa		13.3	□□□□□ -0.28
RDH13-223	ENST00000610356	PGP	A6NDG6	321 aa		13.3	□□□□□ -0.28
RDH13-223	ENST00000610356	SLC17A3	O00476	420 aa		13.3	□□□□□ -0.28
RDH13-223	ENST00000610356	SLC25A5	P05141	298 aa	Known RBP	13.3	□□□□□ -0.28
RDH13-223	ENST00000610356	IGHV4-31	P0DP07	118 aa		13.3	□□□□□ -0.28
RDH13-223	ENST00000610356	TAS2R60	P59551	318 aa		13.3	□□□□□ -0.28
RDH13-223	ENST00000610356	C19orf54	Q5BKX5	351 aa		13.3	□□□□□ -0.28
RDH13-223	ENST00000610356	IGF2BP2-AS1	Q96M15	143 aa		13.3	□□□□□ -0.28
RDH13-223	ENST00000610356	CDC42EP3	Q9UKI2	254 aa		13.3	□□□□□ -0.28
RDH13-223	ENST00000610356	RNF24	Q9Y225	148 aa		13.3	□□□□□ -0.28
RDH13-223	ENST00000610356	ISLR	O14498	428 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	GPR183	P32249	361 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	ERVFC1-1	P60608	527 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	TMEM256	Q8N2U0	113 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	LINC00469	Q8N7U9	141 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	OR4F17	Q8NGA8	305 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	EEF1AKMT3	Q96AZ1	226 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	CHRDL1	Q9BU40	450 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356		Q9H3A6	140 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	EPDR1	Q9UM22	224 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	USP9Y	O00507	2555 aa	Predicted RBP	13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	VPS13C	Q709C8	3753 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356		H3BTX0	84 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	IGF1	P05019	195 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	RAB4B	P61018	213 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	RPL19	P84098	196 aa	Known RBP	13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	COX19	Q49B96	90 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	C5orf17	Q8NAS9	161 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	MBD6	Q96DN6	1003 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	MS4A10	Q96PG2	267 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	GNB1L	Q9BYB4	327 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	MRPL18	Q9H0U6	180 aa	Known RBP	13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	ZNF586	Q9NXT0	402 aa		13.29	□□□□□ -0.28
RDH13-223	ENST00000610356	PTPN13	Q12923	2485 aa		13.28	□□□□□ -0.28
RDH13-223	ENST00000610356	SVEP1	Q4LDE5	3571 aa		13.28	□□□□□ -0.28
RDH13-223	ENST00000610356	IGLV2-8	P01709	118 aa		13.28	□□□□□ -0.28
RDH13-223	ENST00000610356	IGHG2	P01859	326 aa		13.28	□□□□□ -0.28
RDH13-223	ENST00000610356	GNG5	P63218	68 aa		13.28	□□□□□ -0.28
RDH13-223	ENST00000610356	PAFAH1B2	P68402	229 aa		13.28	□□□□□ -0.28
RDH13-223	ENST00000610356		Q0VG73	95 aa		13.28	□□□□□ -0.28
RDH13-223	ENST00000610356		Q96MF0	132 aa		13.28	□□□□□ -0.28
RDH13-223	ENST00000610356	OTOR	Q9NRC9	128 aa		13.28	□□□□□ -0.28
RDH13-223	ENST00000610356	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.27	□□□□□ -0.28
RDH13-223	ENST00000610356	NUPR1	O60356	82 aa		13.27	□□□□□ -0.28
RDH13-223	ENST00000610356	CBLN1	P23435	193 aa		13.27	□□□□□ -0.28
RDH13-223	ENST00000610356	OR5I1	Q13606	314 aa		13.27	□□□□□ -0.28
RDH13-223	ENST00000610356	LBH	Q53QV2	105 aa	Predicted RBP	13.27	□□□□□ -0.28
RDH13-223	ENST00000610356	PRSS57	Q6UWY2	283 aa		13.27	□□□□□ -0.28
RDH13-223	ENST00000610356	LINC00527	Q9UJ94	153 aa		13.27	□□□□□ -0.28
RDH13-223	ENST00000610356	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.27	□□□□□ -0.28
RDH13-223	ENST00000610356	POLQ	O75417	2590 aa		13.27	□□□□□ -0.29
RDH13-223	ENST00000610356	TRBV7-1	A0A0A6YYK4	115 aa		13.27	□□□□□ -0.29
RDH13-223	ENST00000610356	FAM223B	A6NKX1	122 aa		13.27	□□□□□ -0.29
RDH13-223	ENST00000610356	IGLC2	P0DOY2	106 aa		13.27	□□□□□ -0.29
RDH13-223	ENST00000610356	S100A7	P31151	101 aa		13.27	□□□□□ -0.29
RDH13-223	ENST00000610356	DEFB112	Q30KQ8	113 aa		13.27	□□□□□ -0.29
RDH13-223	ENST00000610356	FAM223A	Q8IWN6	122 aa		13.27	□□□□□ -0.29
RDH13-223	ENST00000610356	TMEM190	Q8WZ59	177 aa		13.27	□□□□□ -0.29
RDH13-223	ENST00000610356	LINC00479	Q96M42	142 aa		13.27	□□□□□ -0.29
RDH13-223	ENST00000610356	CCDC140	Q96MF4	163 aa		13.27	□□□□□ -0.29
RDH13-223	ENST00000610356	ATG101	Q9BSB4	218 aa		13.27	□□□□□ -0.29
RDH13-223	ENST00000610356	TP53TG3	Q9ULZ0	132 aa		13.27	□□□□□ -0.29
RDH13-223	ENST00000610356	RPH3AL	Q9UNE2	315 aa		13.27	□□□□□ -0.29
RDH13-223	ENST00000610356	BMPR1B	O00238	502 aa		13.26	□□□□□ -0.29
RDH13-223	ENST00000610356	MT-ND6	P03923	174 aa		13.26	□□□□□ -0.29
RDH13-223	ENST00000610356	CLEC3B	P05452	202 aa		13.26	□□□□□ -0.29
RDH13-223	ENST00000610356	CRISP2	P16562	243 aa		13.26	□□□□□ -0.29
RDH13-223	ENST00000610356	UBE2G1	P62253	170 aa		13.26	□□□□□ -0.29
RDH13-223	ENST00000610356	ATP5G2	Q06055	141 aa		13.26	□□□□□ -0.29
RDH13-223	ENST00000610356	WDR73	Q6P4I2	378 aa		13.26	□□□□□ -0.29
RDH13-223	ENST00000610356	BCL6B	Q8N143	479 aa	Predicted RBP	13.26	□□□□□ -0.29
RDH13-223	ENST00000610356	CMTM2	Q8TAZ6	248 aa		13.26	□□□□□ -0.29
RDH13-223	ENST00000610356	NDUFAF3	Q9BU61	184 aa		13.26	□□□□□ -0.29
RDH13-223	ENST00000610356	RABAC1	Q9UI14	185 aa		13.26	□□□□□ -0.29

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