RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 KNCNA6PVL3 124 aa7.3□□□□□ -1.24
CTSA-215ENST00000607187 SNRPD3P62318 126 aaKnown RBP7.3□□□□□ -1.24
CTSA-215ENST00000607187 ARL16Q0P5N6 197 aa7.3□□□□□ -1.24
CTSA-215ENST00000607187 PSMG4Q5JS54 123 aa7.3□□□□□ -1.24
CTSA-215ENST00000607187 ACTL10Q5JWF8 245 aa7.3□□□□□ -1.24
CTSA-215ENST00000607187 GSG1LQ6UXU4 331 aa7.3□□□□□ -1.24
CTSA-215ENST00000607187 CYP2G1PQ6ZSU1 146 aa7.3□□□□□ -1.24
CTSA-215ENST00000607187 GATAD1Q8WUU5 269 aa7.3□□□□□ -1.24
CTSA-215ENST00000607187 PPP1R14BQ96C90 147 aa7.3□□□□□ -1.24
CTSA-215ENST00000607187 GGACTQ9BVM4 153 aa7.3□□□□□ -1.24
CTSA-215ENST00000607187 C11orf1Q9H5F2 150 aa7.3□□□□□ -1.24
CTSA-215ENST00000607187 NPVFQ9HCQ7 196 aa7.3□□□□□ -1.24
CTSA-215ENST00000607187 LSM5Q9Y4Y9 91 aaKnown RBP7.3□□□□□ -1.24
CTSA-215ENST00000607187 A0A0J9YWU9 116 aa7.29□□□□□ -1.24
CTSA-215ENST00000607187 ZNF98A6NK75 572 aa7.29□□□□□ -1.24
CTSA-215ENST00000607187 L7N2F9 121 aa7.29□□□□□ -1.24
CTSA-215ENST00000607187 SOCS3O14543 225 aa7.29□□□□□ -1.24
CTSA-215ENST00000607187 DEDDO75618 318 aa7.29□□□□□ -1.24
CTSA-215ENST00000607187 CA1P00915 261 aaPredicted RBP7.29□□□□□ -1.24
CTSA-215ENST00000607187 GIG44P09565 113 aaPredicted RBP7.29□□□□□ -1.24
CTSA-215ENST00000607187 SPP1P10451 314 aa7.29□□□□□ -1.24
CTSA-215ENST00000607187 ORM2P19652 201 aa7.29□□□□□ -1.24
CTSA-215ENST00000607187 FAM3BP58499 235 aaPredicted RBP7.29□□□□□ -1.24
CTSA-215ENST00000607187 PLP1P60201 277 aa7.29□□□□□ -1.24
CTSA-215ENST00000607187 SELENOTP62341 195 aa7.29□□□□□ -1.24
CTSA-215ENST00000607187 OR8I2Q8N0Y5 310 aa7.29□□□□□ -1.24
CTSA-215ENST00000607187 OR1B1Q8NGR6 318 aa7.29□□□□□ -1.24
CTSA-215ENST00000607187 MARVELD1Q9BSK0 173 aa7.29□□□□□ -1.24
CTSA-215ENST00000607187 GPN1Q9HCN4 374 aaPredicted RBP7.29□□□□□ -1.24
CTSA-215ENST00000607187 MGAT4CQ9UBM8 478 aa7.29□□□□□ -1.24
CTSA-215ENST00000607187 DYNC2H1Q8NCM8 4307 aaKnown RBP7.28□□□□□ -1.24
CTSA-215ENST00000607187 INMT-MINDY4F8WBC2 141 aa7.28□□□□□ -1.24
CTSA-215ENST00000607187 PRAF2O60831 178 aa7.28□□□□□ -1.24
CTSA-215ENST00000607187 HYPMO75409 117 aa7.28□□□□□ -1.24
CTSA-215ENST00000607187 LINC00869P0C866 280 aa7.28□□□□□ -1.24
CTSA-215ENST00000607187 S100A7P31151 101 aa7.28□□□□□ -1.24
CTSA-215ENST00000607187 PSMB3P49720 205 aa7.28□□□□□ -1.24
CTSA-215ENST00000607187 BCAP31P51572 246 aa7.28□□□□□ -1.24
CTSA-215ENST00000607187 DEFA1P59665 94 aa7.28□□□□□ -1.24
CTSA-215ENST00000607187 DEFA3P59666 94 aa7.28□□□□□ -1.24
CTSA-215ENST00000607187 MORN3Q6PF18 240 aaPredicted RBP7.28□□□□□ -1.24
CTSA-215ENST00000607187 OR11H2Q8NH07 326 aa7.28□□□□□ -1.24
CTSA-215ENST00000607187 NEU1Q99519 415 aa7.28□□□□□ -1.24
CTSA-215ENST00000607187 TMEM147Q9BVK8 224 aa7.28□□□□□ -1.24
CTSA-215ENST00000607187 SLC25A39Q9BZJ4 359 aaPredicted RBP7.28□□□□□ -1.24
CTSA-215ENST00000607187 SLC25A22Q9H936 323 aa7.28□□□□□ -1.24
CTSA-215ENST00000607187 FAM24AA6NFZ4 105 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 H3BMM0 161 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 H3BRN7 92 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 ISLRO14498 428 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 AGPAT2O15120 278 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 PVALBP20472 110 aaPredicted RBP7.27□□□□□ -1.25
CTSA-215ENST00000607187 C4BPBP20851 252 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 ID1P41134 155 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 GALR1P47211 349 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 CAV2P51636 162 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 S100A10P60903 97 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 EWSR1Q01844 656 aaKnown RBP eCLIP7.27□□□□□ -1.25
CTSA-215ENST00000607187 SLC38A11Q08AI6 406 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 TMEM41BQ5BJD5 291 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 SAMD13Q5VXD3 122 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 C17orf77Q96MU5 243 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 GPR82Q96P67 336 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 RARRES2Q99969 163 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 SHANK2-AS3Q9BTD1 123 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 SCRT1Q9BWW7 348 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 LYRM2Q9NU23 88 aaPredicted RBP7.27□□□□□ -1.25
CTSA-215ENST00000607187 DOK5Q9P104 306 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 HIGD1AQ9Y241 93 aa7.27□□□□□ -1.25
CTSA-215ENST00000607187 RYR3Q15413 4870 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 CST7O76096 145 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 OR5G3P0C626 314 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 HLA-DRB4P13762 266 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 MEOX2P50222 304 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 TIRAPP58753 221 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 VWC2Q2TAL6 325 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 GDF5OSQ5U4N7 250 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 PATE2Q6UY27 113 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 ZNF546Q86UE3 836 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 TMEM252Q8N6L7 170 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 TMEM217Q8N7C4 229 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 CSNK1G2-AS1Q8NCQ2 148 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 LINC00052Q96N35 136 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 MGST2Q99735 147 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 RSG1Q9BU20 258 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 NMES1Q9C002 83 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 ARL6Q9H0F7 186 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 SAV1Q9H4B6 383 aaPredicted RBP7.26□□□□□ -1.25
CTSA-215ENST00000607187 HLA-DRB4X5D2U9 266 aa7.26□□□□□ -1.25
CTSA-215ENST00000607187 SACSQ9NZJ4 4579 aa7.25□□□□□ -1.25
CTSA-215ENST00000607187 IGSF23A1L1A6 192 aa7.25□□□□□ -1.25
CTSA-215ENST00000607187 GOSR2O14653 212 aa7.25□□□□□ -1.25
CTSA-215ENST00000607187 SIX6O95475 246 aa7.25□□□□□ -1.25
CTSA-215ENST00000607187 RPL7P18124 248 aaKnown RBP7.25□□□□□ -1.25
CTSA-215ENST00000607187 S100A11P31949 105 aa7.25□□□□□ -1.25
CTSA-215ENST00000607187 SULT1A1P50225 295 aa7.25□□□□□ -1.25
CTSA-215ENST00000607187 DEFB1P60022 68 aa7.25□□□□□ -1.25
CTSA-215ENST00000607187 NUTF2P61970 127 aaKnown RBP7.25□□□□□ -1.25
CTSA-215ENST00000607187 PXDC1Q5TGL8 231 aa7.25□□□□□ -1.25
CTSA-215ENST00000607187 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms