RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 SRRQ9GZT4 340 aa5.42□□□□□ -1.54
CUX1-219ENST00000606749 PSENENQ9NZ42 101 aa5.42□□□□□ -1.54
CUX1-219ENST00000606749 FLVCR2Q9UPI3 526 aa5.42□□□□□ -1.54
CUX1-219ENST00000606749 TRAV8-2A0A0B4J237 113 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 TEX48A0A1B0GUV7 120 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 LOC102723971A0A1B0GUV8 181 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 NAP1L6A6NFF2 107 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 H3BRN7 92 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 M0R2N4 97 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 NDUFB6O95139 128 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 DUSP14O95147 198 aaKnown RBP5.41□□□□□ -1.54
CUX1-219ENST00000606749 IFNA21P01568 189 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 PRM2P04554 102 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 IL5P05113 134 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 CNN1P51911 297 aaKnown RBP5.41□□□□□ -1.54
CUX1-219ENST00000606749 PLP1P60201 277 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 FGL1Q08830 312 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 RRN3P1Q2M238 152 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 SPANXN2Q5MJ10 180 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 CYP2G1PQ6ZSU1 146 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 ACOT7LQ6ZUV0 252 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 OR11H7Q8NGC8 314 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 SMIM8Q96KF7 97 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 IGF2BP2-AS1Q96M15 143 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 SLC25A39Q9BZJ4 359 aaPredicted RBP5.41□□□□□ -1.54
CUX1-219ENST00000606749 RBM38Q9H0Z9 239 aaKnown RBP5.41□□□□□ -1.54
CUX1-219ENST00000606749 YTHDF2Q9Y5A9 579 aaKnown RBP5.41□□□□□ -1.54
CUX1-219ENST00000606749 DNAH6Q9C0G6 4158 aa5.41□□□□□ -1.54
CUX1-219ENST00000606749 A0A1B0GVY2 172 aa5.4□□□□□ -1.54
CUX1-219ENST00000606749 SMCO3A2RU48 225 aa5.4□□□□□ -1.54
CUX1-219ENST00000606749 ZNF705GA8MUZ8 300 aaPredicted RBP5.4□□□□□ -1.54
CUX1-219ENST00000606749 M0R2Z0 102 aa5.4□□□□□ -1.54
CUX1-219ENST00000606749 RTL8CO15255 209 aa5.4□□□□□ -1.54
CUX1-219ENST00000606749 CRXO43186 299 aaPredicted RBP5.4□□□□□ -1.54
CUX1-219ENST00000606749 SSSCA1O60232 199 aa5.4□□□□□ -1.54
CUX1-219ENST00000606749 HYPMO75409 117 aa5.4□□□□□ -1.54
CUX1-219ENST00000606749 CCNKO75909 580 aa5.4□□□□□ -1.54
CUX1-219ENST00000606749 OR4E1P0C645 316 aa5.4□□□□□ -1.54
CUX1-219ENST00000606749 HTN3P15516 51 aa5.4□□□□□ -1.54
CUX1-219ENST00000606749 SPINK13Q1W4C9 94 aa5.4□□□□□ -1.54
CUX1-219ENST00000606749 LGALS9BQ3B8N2 356 aa5.4□□□□□ -1.54
CUX1-219ENST00000606749 PATE2Q6UY27 113 aa5.4□□□□□ -1.54
CUX1-219ENST00000606749 RNF182Q8N6D2 247 aa5.4□□□□□ -1.54
CUX1-219ENST00000606749 SDHCQ99643 169 aaPredicted RBP5.4□□□□□ -1.54
CUX1-219ENST00000606749 SHANK2-AS3Q9BTD1 123 aa5.4□□□□□ -1.54
CUX1-219ENST00000606749 TMEM208Q9BTX3 173 aa5.4□□□□□ -1.54
CUX1-219ENST00000606749 HIGD1AQ9Y241 93 aa5.4□□□□□ -1.54
CUX1-219ENST00000606749 DNAH10Q8IVF4 4471 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 LINC00854A0A1B0GVQ3 168 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 PRSS29PA6NIE9 313 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 FNDC10F2Z333 226 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 ZNF701M0R085 212 aaPredicted RBP5.39□□□□□ -1.55
CUX1-219ENST00000606749 OR5G3P0C626 314 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 METTL15P1P0C7V9 234 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 LINC00869P0C866 280 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 RPL7P18124 248 aaKnown RBP5.39□□□□□ -1.55
CUX1-219ENST00000606749 ANXA7P20073 488 aaKnown RBP5.39□□□□□ -1.55
CUX1-219ENST00000606749 BTCP35070 178 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 INPP1P49441 399 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 TAS2R30P59541 319 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 RAP2BP61225 183 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 B2MP61769 119 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 DAD1P61803 113 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 RRAS2P62070 204 aaPredicted RBP5.39□□□□□ -1.55
CUX1-219ENST00000606749 SELENOTP62341 195 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 DLK1P80370 383 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 RNF212Q495C1 297 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 TRIQKQ629K1 86 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 TMEM14EPQ6UXP3 125 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 Q6ZR54 194 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 ZNF738Q8NE65 137 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 OR10P1Q8NGE3 313 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 UHRF2Q96PU4 802 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 ARL6Q9H0F7 186 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 NPVFQ9HCQ7 196 aa5.39□□□□□ -1.55
CUX1-219ENST00000606749 IGLV2-18A0A075B6J9 118 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 TRAV12-2A0A075B6T6 113 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 A0A087X0K7 114 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 PLAC8L1A1L4L8 177 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 LYRM9A8MSI8 78 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 CENPXA8MT69 81 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 K7EPK0 472 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 INSP01308 110 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 CXCL3P19876 107 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 AZU1P20160 251 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 TSPOP30536 169 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 ARL16Q0P5N6 197 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 FCN2Q15485 313 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 PSG3Q16557 428 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 IAH1Q2TAA2 248 aaPredicted RBP5.38□□□□□ -1.55
CUX1-219ENST00000606749 C4orf46Q504U0 113 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 TMEM88Q6PEY1 159 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 TEPPQ6URK8 271 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 S100A7AQ86SG5 101 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 UBE2DNLQ8IWF7 75 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 BAP18Q8IXM2 172 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 OR8A1Q8NGG7 326 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 LINC01587Q99440 93 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 GSKIPQ9P0R6 139 aa5.38□□□□□ -1.55
CUX1-219ENST00000606749 HECTD4Q9Y4D8 3996 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms