RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 CLUHP3Q96NS8 147 aa11.78□□□□□ -0.52
TUBE1-206ENST00000603722 GPR82Q96P67 336 aa11.78□□□□□ -0.52
TUBE1-206ENST00000603722 SHANK2-AS3Q9BTD1 123 aa11.78□□□□□ -0.52
TUBE1-206ENST00000603722 SLC25A39Q9BZJ4 359 aaPredicted RBP11.78□□□□□ -0.52
TUBE1-206ENST00000603722 MGAT4CQ9UBM8 478 aa11.78□□□□□ -0.52
TUBE1-206ENST00000603722 HIGD1AQ9Y241 93 aa11.78□□□□□ -0.52
TUBE1-206ENST00000603722 FRAS1Q86XX4 4008 aa11.77□□□□□ -0.53
TUBE1-206ENST00000603722 TRAV6A0A075B6T7 132 aa11.77□□□□□ -0.53
TUBE1-206ENST00000603722 ZNF705FA8MVS1 300 aaPredicted RBP11.77□□□□□ -0.53
TUBE1-206ENST00000603722 HYPMO75409 117 aa11.77□□□□□ -0.53
TUBE1-206ENST00000603722 MBPP02686 304 aaPredicted RBP11.77□□□□□ -0.53
TUBE1-206ENST00000603722 ZNF705DP0CH99 300 aaPredicted RBP11.77□□□□□ -0.53
TUBE1-206ENST00000603722 ZNF705BP0CI00 300 aaPredicted RBP11.77□□□□□ -0.53
TUBE1-206ENST00000603722 EMP1P54849 157 aa11.77□□□□□ -0.53
TUBE1-206ENST00000603722 TAS2R30P59541 319 aa11.77□□□□□ -0.53
TUBE1-206ENST00000603722 FGL1Q08830 312 aa11.77□□□□□ -0.53
TUBE1-206ENST00000603722 SLC38A11Q08AI6 406 aa11.77□□□□□ -0.53
TUBE1-206ENST00000603722 C12orf74Q32Q52 190 aa11.77□□□□□ -0.53
TUBE1-206ENST00000603722 IGFL4Q6B9Z1 124 aa11.77□□□□□ -0.53
TUBE1-206ENST00000603722 UHRF2Q96PU4 802 aa11.77□□□□□ -0.53
TUBE1-206ENST00000603722 NEU1Q99519 415 aa11.77□□□□□ -0.53
TUBE1-206ENST00000603722 NPVFQ9HCQ7 196 aa11.77□□□□□ -0.53
TUBE1-206ENST00000603722 APLNQ9ULZ1 77 aa11.77□□□□□ -0.53
TUBE1-206ENST00000603722 FAM25EA8MYX2 175 aa11.76□□□□□ -0.53
TUBE1-206ENST00000603722 TCRBP04435 133 aa11.76□□□□□ -0.53
TUBE1-206ENST00000603722 OR5G3P0C626 314 aa11.76□□□□□ -0.53
TUBE1-206ENST00000603722 SELENOTP62341 195 aa11.76□□□□□ -0.53
TUBE1-206ENST00000603722 PRR20EP86478 221 aa11.76□□□□□ -0.53
TUBE1-206ENST00000603722 PRR20CP86479 221 aa11.76□□□□□ -0.53
TUBE1-206ENST00000603722 PRR20DP86480 221 aa11.76□□□□□ -0.53
TUBE1-206ENST00000603722 PRR20BP86481 221 aa11.76□□□□□ -0.53
TUBE1-206ENST00000603722 PRR20AP86496 221 aa11.76□□□□□ -0.53
TUBE1-206ENST00000603722 ARL16Q0P5N6 197 aa11.76□□□□□ -0.53
TUBE1-206ENST00000603722 RNF182Q8N6D2 247 aa11.76□□□□□ -0.53
TUBE1-206ENST00000603722 SEC22CQ9BRL7 303 aa11.76□□□□□ -0.53
TUBE1-206ENST00000603722 NUDT15Q9NV35 164 aa11.76□□□□□ -0.53
TUBE1-206ENST00000603722 IGHV4-4A0A075B6R2 117 aa11.75□□□□□ -0.53
TUBE1-206ENST00000603722 DEFB131BA0A096LNP1 70 aa11.75□□□□□ -0.53
TUBE1-206ENST00000603722 TRAV8-2A0A0B4J237 113 aa11.75□□□□□ -0.53
TUBE1-206ENST00000603722 C7orf66A4D0T2 115 aa11.75□□□□□ -0.53
TUBE1-206ENST00000603722 FNDC10F2Z333 226 aa11.75□□□□□ -0.53
TUBE1-206ENST00000603722 RPL7P18124 248 aaKnown RBP11.75□□□□□ -0.53
TUBE1-206ENST00000603722 PLP1P60201 277 aa11.75□□□□□ -0.53
TUBE1-206ENST00000603722 ZNF846Q147U1 533 aa11.75□□□□□ -0.53
TUBE1-206ENST00000603722 TEPPQ6URK8 271 aa11.75□□□□□ -0.53
TUBE1-206ENST00000603722 ZNF431Q8TF32 576 aaPredicted RBP11.75□□□□□ -0.53
TUBE1-206ENST00000603722 CCDC32Q9BV29 185 aa11.75□□□□□ -0.53
TUBE1-206ENST00000603722 ARL6Q9H0F7 186 aa11.75□□□□□ -0.53
TUBE1-206ENST00000603722 GOLT1BQ9Y3E0 138 aa11.75□□□□□ -0.53
TUBE1-206ENST00000603722 RFNGQ9Y644 331 aa11.75□□□□□ -0.53
TUBE1-206ENST00000603722 TMEM189A5PLL7 270 aa11.74□□□□□ -0.53
TUBE1-206ENST00000603722 SMIM9A6NGZ8 99 aa11.74□□□□□ -0.53
TUBE1-206ENST00000603722 K7EPK0 472 aa11.74□□□□□ -0.53
TUBE1-206ENST00000603722 L7N2F9 121 aa11.74□□□□□ -0.53
TUBE1-206ENST00000603722 VAMP2P63027 116 aa11.74□□□□□ -0.53
TUBE1-206ENST00000603722 C1orf158Q8N1D5 194 aa11.74□□□□□ -0.53
TUBE1-206ENST00000603722 LSM5Q9Y4Y9 91 aaKnown RBP11.74□□□□□ -0.53
TUBE1-206ENST00000603722 C5orf51A6NDU8 294 aa11.73□□□□□ -0.53
TUBE1-206ENST00000603722 A8MTW9 85 aa11.73□□□□□ -0.53
TUBE1-206ENST00000603722 AGRNO00468 2067 aa11.73□□□□□ -0.53
TUBE1-206ENST00000603722 CNN1P51911 297 aaKnown RBP11.73□□□□□ -0.53
TUBE1-206ENST00000603722 AMTNQ6UX39 209 aa11.73□□□□□ -0.53
TUBE1-206ENST00000603722 S100A7AQ86SG5 101 aa11.73□□□□□ -0.53
TUBE1-206ENST00000603722 ZNF546Q86UE3 836 aa11.73□□□□□ -0.53
TUBE1-206ENST00000603722 ZNF738Q8NE65 137 aa11.73□□□□□ -0.53
TUBE1-206ENST00000603722 RNF126Q9BV68 326 aa11.73□□□□□ -0.53
TUBE1-206ENST00000603722 GGACTQ9BVM4 153 aa11.73□□□□□ -0.53
TUBE1-206ENST00000603722 ARV1Q9H2C2 271 aa11.73□□□□□ -0.53
TUBE1-206ENST00000603722 AGPAT2O15120 278 aa11.72□□□□□ -0.53
TUBE1-206ENST00000603722 HBE1P02100 147 aa11.72□□□□□ -0.53
TUBE1-206ENST00000603722 AMBPP02760 352 aa11.72□□□□□ -0.53
TUBE1-206ENST00000603722 H2AFB2P0C5Z0 115 aa11.72□□□□□ -0.53
TUBE1-206ENST00000603722 SPART-AS1P0CW21 52 aa11.72□□□□□ -0.53
TUBE1-206ENST00000603722 BCAP31P51572 246 aa11.72□□□□□ -0.53
TUBE1-206ENST00000603722 CAV2P51636 162 aa11.72□□□□□ -0.53
TUBE1-206ENST00000603722 PATE2Q6UY27 113 aa11.72□□□□□ -0.53
TUBE1-206ENST00000603722 DNAH6Q9C0G6 4158 aa11.71□□□□□ -0.53
TUBE1-206ENST00000603722 A0A087X0K7 114 aa11.71□□□□□ -0.53
TUBE1-206ENST00000603722 LOC102723971A0A1B0GUV8 181 aa11.71□□□□□ -0.53
TUBE1-206ENST00000603722 GOSR2O14653 212 aa11.71□□□□□ -0.53
TUBE1-206ENST00000603722 DUSP14O95147 198 aaKnown RBP11.71□□□□□ -0.53
TUBE1-206ENST00000603722 SPINK13Q1W4C9 94 aa11.71□□□□□ -0.53
TUBE1-206ENST00000603722 C12orf45Q8N5I9 185 aaPredicted RBP11.71□□□□□ -0.53
TUBE1-206ENST00000603722 OR11H7Q8NGC8 314 aa11.71□□□□□ -0.53
TUBE1-206ENST00000603722 IGF2BP2-AS1Q96M15 143 aa11.71□□□□□ -0.53
TUBE1-206ENST00000603722 MGST2Q99735 147 aa11.71□□□□□ -0.53
TUBE1-206ENST00000603722 TMEM208Q9BTX3 173 aa11.71□□□□□ -0.53
TUBE1-206ENST00000603722 DKK2Q9UBU2 259 aa11.71□□□□□ -0.53
TUBE1-206ENST00000603722 FAM240BA0A1B0GVZ2 78 aa11.7□□□□□ -0.54
TUBE1-206ENST00000603722 M0R2Z0 102 aa11.7□□□□□ -0.54
TUBE1-206ENST00000603722 CST7O76096 145 aa11.7□□□□□ -0.54
TUBE1-206ENST00000603722 PRB4P10163 310 aaPredicted RBP11.7□□□□□ -0.54
TUBE1-206ENST00000603722 S100A10P60903 97 aa11.7□□□□□ -0.54
TUBE1-206ENST00000603722 RRN3P1Q2M238 152 aa11.7□□□□□ -0.54
TUBE1-206ENST00000603722 PXDC1Q5TGL8 231 aa11.7□□□□□ -0.54
TUBE1-206ENST00000603722 FAM222AQ5U5X8 452 aa11.7□□□□□ -0.54
TUBE1-206ENST00000603722 LINC00305Q7Z4B0 112 aa11.7□□□□□ -0.54
TUBE1-206ENST00000603722 LRRC20Q8TCA0 184 aa11.7□□□□□ -0.54
TUBE1-206ENST00000603722 TEX48A0A1B0GUV7 120 aa11.69□□□□□ -0.54
TUBE1-206ENST00000603722 FAM24AA6NFZ4 105 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms