RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 TRPT1Q86TN4 253 aaKnown RBP3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 Q9HAA7 133 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 SLC39A9Q9NUM3 307 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 MPC1Q9Y5U8 109 aa3.94□□□□□ -1.78
SPTBN1-206ENST00000602898 EXPH5Q8NEV8 1989 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 DOCK9Q9BZ29 2069 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 K7ENP7 123 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 M0R2P5 195 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 BMPR1BO00238 502 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 HMGN2P05204 90 aaKnown RBP3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 IGHV4-31P0DP07 118 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 OPRK1P41145 380 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 TAS2R45P59539 299 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 C9orf153Q5TBE3 101 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 CFAP126Q5VTH2 177 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 NFE4Q86UQ8 179 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 OR5C1Q8NGR4 320 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 OR9G1Q8NH87 305 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 IGFBPL1Q8WX77 278 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 H1FXQ92522 213 aaKnown RBP3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 PLXNA2O75051 1894 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 HCFC1P51610 2035 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 IGLV3-16A0A075B6K0 115 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 TMED7-TICAM2A0A0A6YYA0 188 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 A0A1B0GVT2 93 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 CRYM-AS1A6NIL9 109 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 UQCRQO14949 82 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 SRSF10O75494 262 aaKnown RBP3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 IGLV3-27P01718 113 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 CECR9P0C854 216 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 MPV17P39210 176 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 ATP5G3P48201 142 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 PPP1CAP62136 330 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 TEN1Q86WV5 123 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 C3orf22Q8N5N4 141 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 TMEM252Q8N6L7 170 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 PCSK5Q92824 1860 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 LINC00479Q96M42 142 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 METTL26Q96S19 204 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 PBOV1Q9GZY1 135 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 MAP6D1Q9H9H5 199 aa3.93□□□□□ -1.78
SPTBN1-206ENST00000602898 TRPM6Q9BX84 2022 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 IGHMP01871 453 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 PEBP1P30086 187 aaKnown RBP3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 CD70P32970 193 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 DYNLT3P51808 116 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 ZNF136P52737 540 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 ZNF718Q3SXZ3 478 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 FAM19A3Q7Z5A8 133 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 C10orf126Q8N4M7 172 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 LINC00526Q96FQ7 95 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 C18orf15Q96N68 181 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 ZNF286AQ9HBT8 521 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 TRAV4A0A0B4J268 109 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 LOC101059948A0A1B0GTJ6 334 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 LOC107986453A0A1B0GWG9 222 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 C5orf49A4QMS7 147 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 IGLL5B9A064 214 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 NDUFC2O95298 119 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 NCBP2P52298 156 aaKnown RBP eCLIP3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 LINC01545Q5VT33 79 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 Q6ZRM9 215 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 Q6ZSV7 163 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 SLC22A24Q8N4F4 322 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 OR2A1Q8NGT9 310 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 C18orf12Q96KH6 178 aa3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 KIAA0100Q14667 2235 aaKnown RBP3.92□□□□□ -1.78
SPTBN1-206ENST00000602898 LOC100131303A0A0U1RQF7 123 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 KNCNA6PVL3 124 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 J3QQQ9 107 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 MED14OSP0DP75 135 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 MYCNOSP40205 109 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 HERV-K104P61576 105 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 FHL1Q13642 323 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 AMTNQ6UX39 209 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 LINC00596Q86U02 117 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 HIGD1BQ9P298 99 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 CHCHD2Q9Y6H1 151 aaPredicted RBP3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 TRAV8-2A0A0B4J237 113 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 ODF3L2Q3SX64 289 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 C1orf100Q5SVJ3 147 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 C3orf56Q8N813 242 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 TMEM75Q8N9X5 138 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 CHCHD1Q96BP2 118 aaKnown RBP3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 NMNAT3Q96T66 252 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 TNFRSF19Q9NS68 423 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 LY96Q9Y6Y9 160 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 LINC01553A4QN01 128 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 OOSP1A8MZH6 123 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 LINC01619G3V211 115 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 SEC61BP60468 96 aaKnown RBP3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 RIGQ13278 110 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 LINC01590Q5TEZ4 76 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 C1orf158Q8N1D5 194 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 IL1F10Q8WWZ1 152 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 PLEKHB2Q96CS7 222 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 TXNDC17Q9BRA2 123 aa3.91□□□□□ -1.78
SPTBN1-206ENST00000602898 A0A0C4DFX4 3053 aa3.9□□□□□ -1.78
SPTBN1-206ENST00000602898 SHISA9B4DS77 424 aa3.9□□□□□ -1.78
SPTBN1-206ENST00000602898 SCRG1O75711 98 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms