RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 TRGV9Q99603 122 aa10.93□□□□□ -0.66
SSBP4-211ENST00000601614 NAA60Q9H7X0 242 aa10.93□□□□□ -0.66
SSBP4-211ENST00000601614 PRR13Q9NZ81 148 aa10.93□□□□□ -0.66
SSBP4-211ENST00000601614 U3KQ87 197 aa10.93□□□□□ -0.66
SSBP4-211ENST00000601614 A0A096LPF7 62 aa10.92□□□□□ -0.66
SSBP4-211ENST00000601614 SMIM31A0A1B0GVY4 71 aa10.92□□□□□ -0.66
SSBP4-211ENST00000601614 H3BNG1 76 aa10.92□□□□□ -0.66
SSBP4-211ENST00000601614 FAM229AH3BQW9 127 aa10.92□□□□□ -0.66
SSBP4-211ENST00000601614 IFNA5P01569 189 aa10.92□□□□□ -0.66
SSBP4-211ENST00000601614 GPX4P36969 197 aaPredicted RBP10.92□□□□□ -0.66
SSBP4-211ENST00000601614 KIR3DS1Q14943 382 aa10.92□□□□□ -0.66
SSBP4-211ENST00000601614 TMEM182Q6ZP80 229 aaPredicted RBP10.92□□□□□ -0.66
SSBP4-211ENST00000601614 OR52I2Q8NH67 350 aa10.92□□□□□ -0.66
SSBP4-211ENST00000601614 DTD1Q8TEA8 209 aa10.92□□□□□ -0.66
SSBP4-211ENST00000601614 SLC35E1Q96K37 410 aa10.92□□□□□ -0.66
SSBP4-211ENST00000601614 VCX3BQ9H321 246 aa10.92□□□□□ -0.66
SSBP4-211ENST00000601614 RBKSQ9H477 322 aa10.92□□□□□ -0.66
SSBP4-211ENST00000601614 GAGE12BA1L429 117 aa10.91□□□□□ -0.66
SSBP4-211ENST00000601614 SIVA1O15304 175 aa10.91□□□□□ -0.66
SSBP4-211ENST00000601614 HPGDSO60760 199 aa10.91□□□□□ -0.66
SSBP4-211ENST00000601614 GAGE7O76087 117 aa10.91□□□□□ -0.66
SSBP4-211ENST00000601614 GAGE12FP0CL80 117 aa10.91□□□□□ -0.66
SSBP4-211ENST00000601614 GAGE12GP0CL81 117 aa10.91□□□□□ -0.66
SSBP4-211ENST00000601614 GAGE12IP0CL82 117 aa10.91□□□□□ -0.66
SSBP4-211ENST00000601614 SULT1A3P0DMM9 295 aa10.91□□□□□ -0.66
SSBP4-211ENST00000601614 SULT1A4P0DMN0 295 aa10.91□□□□□ -0.66
SSBP4-211ENST00000601614 ZNF182P17025 639 aaPredicted RBP10.91□□□□□ -0.66
SSBP4-211ENST00000601614 HIST1H1AQ02539 215 aaPredicted RBP10.91□□□□□ -0.66
SSBP4-211ENST00000601614 SCGB2B2Q4G0G5 96 aa10.91□□□□□ -0.66
SSBP4-211ENST00000601614 ZNF493Q6ZR52 646 aa10.91□□□□□ -0.66
SSBP4-211ENST00000601614 THAP8Q8NA92 274 aa10.91□□□□□ -0.66
SSBP4-211ENST00000601614 ZNF738Q8NE65 137 aa10.91□□□□□ -0.66
SSBP4-211ENST00000601614 HSPB7Q9UBY9 170 aa10.91□□□□□ -0.66
SSBP4-211ENST00000601614 GABARAPH6UMI1 98 aa10.9□□□□□ -0.66
SSBP4-211ENST00000601614 GABARAPO95166 117 aa10.9□□□□□ -0.66
SSBP4-211ENST00000601614 GATA2P23769 480 aaPredicted RBP10.9□□□□□ -0.66
SSBP4-211ENST00000601614 RHOBP62745 196 aa10.9□□□□□ -0.66
SSBP4-211ENST00000601614 FGL1Q08830 312 aa10.9□□□□□ -0.66
SSBP4-211ENST00000601614 FAAP20Q6NZ36 180 aa10.9□□□□□ -0.66
SSBP4-211ENST00000601614 OR8A1Q8NGG7 326 aa10.9□□□□□ -0.66
SSBP4-211ENST00000601614 OR4D5Q8NGN0 318 aa10.9□□□□□ -0.66
SSBP4-211ENST00000601614 OR1B1Q8NGR6 318 aa10.9□□□□□ -0.66
SSBP4-211ENST00000601614 TMPRSS5Q9H3S3 457 aa10.9□□□□□ -0.66
SSBP4-211ENST00000601614 TMEM56-RWDD3S4R434 201 aa10.9□□□□□ -0.66
SSBP4-211ENST00000601614 DNAH8Q96JB1 4490 aa10.89□□□□□ -0.67
SSBP4-211ENST00000601614 FABP1P07148 127 aa10.89□□□□□ -0.67
SSBP4-211ENST00000601614 GCSHP23434 173 aa10.89□□□□□ -0.67
SSBP4-211ENST00000601614 MTFP1Q9UDX5 166 aa10.89□□□□□ -0.67
SSBP4-211ENST00000601614 CRYM-AS1A6NIL9 109 aa10.88□□□□□ -0.67
SSBP4-211ENST00000601614 TNFAIP8O95379 198 aa10.88□□□□□ -0.67
SSBP4-211ENST00000601614 TBPP20226 339 aa10.88□□□□□ -0.67
SSBP4-211ENST00000601614 PARD6GQ9BYG4 376 aaPredicted RBP10.88□□□□□ -0.67
SSBP4-211ENST00000601614 SLC45A2Q9UMX9 530 aa10.88□□□□□ -0.67
SSBP4-211ENST00000601614 C14orf166Q9Y224 244 aaKnown RBP10.88□□□□□ -0.67
SSBP4-211ENST00000601614 LRP1Q07954 4544 aaKnown RBP10.87□□□□□ -0.67
SSBP4-211ENST00000601614 KRTAP29-1A8MX34 341 aaPredicted RBP10.87□□□□□ -0.67
SSBP4-211ENST00000601614 NXPH4O95158 308 aa10.87□□□□□ -0.67
SSBP4-211ENST00000601614 RAB3DO95716 219 aa10.87□□□□□ -0.67
SSBP4-211ENST00000601614 ORM2P19652 201 aa10.87□□□□□ -0.67
SSBP4-211ENST00000601614 CXCL3P19876 107 aa10.87□□□□□ -0.67
SSBP4-211ENST00000601614 CDKN1BP46527 198 aa10.87□□□□□ -0.67
SSBP4-211ENST00000601614 GPR107Q5VW38 600 aa10.87□□□□□ -0.67
SSBP4-211ENST00000601614 YIPF6Q96EC8 236 aa10.87□□□□□ -0.67
SSBP4-211ENST00000601614 H3BRN7 92 aa10.86□□□□□ -0.67
SSBP4-211ENST00000601614 H7BYZ3 331 aa10.86□□□□□ -0.67
SSBP4-211ENST00000601614 ADAP1O75689 374 aa10.86□□□□□ -0.67
SSBP4-211ENST00000601614 RLN2P04090 185 aa10.86□□□□□ -0.67
SSBP4-211ENST00000601614 Q6ZTI0 123 aa10.86□□□□□ -0.67
SSBP4-211ENST00000601614 TMED4Q7Z7H5 227 aa10.86□□□□□ -0.67
SSBP4-211ENST00000601614 TMEM229BQ8NBD8 167 aa10.86□□□□□ -0.67
SSBP4-211ENST00000601614 GPR82Q96P67 336 aa10.86□□□□□ -0.67
SSBP4-211ENST00000601614 PPP1R14DQ9NXH3 145 aa10.86□□□□□ -0.67
SSBP4-211ENST00000601614 CCR6P51684 374 aa10.85□□□□□ -0.67
SSBP4-211ENST00000601614 SMCO1Q147U7 214 aa10.85□□□□□ -0.67
SSBP4-211ENST00000601614 GGNBP1Q5YKI7 109 aa10.85□□□□□ -0.67
SSBP4-211ENST00000601614 STEAP1BQ6NZ63 245 aa10.85□□□□□ -0.67
SSBP4-211ENST00000601614 LYZL2Q7Z4W2 148 aa10.85□□□□□ -0.67
SSBP4-211ENST00000601614 IL22RA2Q969J5 263 aa10.85□□□□□ -0.67
SSBP4-211ENST00000601614 CACFD1Q9UGQ2 172 aa10.85□□□□□ -0.67
SSBP4-211ENST00000601614 GPR132Q9UNW8 380 aa10.85□□□□□ -0.67
SSBP4-211ENST00000601614 PRSS46E5RG02 174 aa10.84□□□□□ -0.67
SSBP4-211ENST00000601614 CFDP00746 253 aaPredicted RBP10.84□□□□□ -0.67
SSBP4-211ENST00000601614 ATP5IP56385 69 aaPredicted RBP10.84□□□□□ -0.67
SSBP4-211ENST00000601614 TAS2R19P59542 299 aa10.84□□□□□ -0.67
SSBP4-211ENST00000601614 NCS1P62166 190 aa10.84□□□□□ -0.67
SSBP4-211ENST00000601614 PSG3Q16557 428 aa10.84□□□□□ -0.67
SSBP4-211ENST00000601614 GFI1BQ5VTD9 330 aa10.84□□□□□ -0.67
SSBP4-211ENST00000601614 TMEM147Q9BVK8 224 aa10.84□□□□□ -0.67
SSBP4-211ENST00000601614 FAM30AQ9NZY2 134 aa10.84□□□□□ -0.67
SSBP4-211ENST00000601614 IAPPP10997 89 aa10.83□□□□□ -0.68
SSBP4-211ENST00000601614 NFE4Q86UQ8 179 aa10.83□□□□□ -0.68
SSBP4-211ENST00000601614 BPIFCQ8NFQ6 507 aa10.83□□□□□ -0.68
SSBP4-211ENST00000601614 C20orf144Q9BQM9 153 aa10.83□□□□□ -0.68
SSBP4-211ENST00000601614 SHANK2-AS3Q9BTD1 123 aa10.83□□□□□ -0.68
SSBP4-211ENST00000601614 TMEM70Q9BUB7 260 aa10.83□□□□□ -0.68
SSBP4-211ENST00000601614 SNURFLB1AK76 121 aa10.82□□□□□ -0.68
SSBP4-211ENST00000601614 FAM25AB3EWG3 89 aa10.82□□□□□ -0.68
SSBP4-211ENST00000601614 FAM25CB3EWG5 89 aa10.82□□□□□ -0.68
SSBP4-211ENST00000601614 FAM25GB3EWG6 89 aa10.82□□□□□ -0.68
SSBP4-211ENST00000601614 SURF2Q15527 256 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms