RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 C9orf170A2RU37 121 aa12.06□□□□□ -0.48
SCAF1-204ENST00000601038 RTL8CO15255 209 aa12.06□□□□□ -0.48
SCAF1-204ENST00000601038 DUSP14O95147 198 aaKnown RBP12.06□□□□□ -0.48
SCAF1-204ENST00000601038 CNN1P51911 297 aaKnown RBP12.06□□□□□ -0.48
SCAF1-204ENST00000601038 CYP2G1PQ6ZSU1 146 aa12.06□□□□□ -0.48
SCAF1-204ENST00000601038 UBE2DNLQ8IWF7 75 aa12.06□□□□□ -0.48
SCAF1-204ENST00000601038 TMEM208Q9BTX3 173 aa12.06□□□□□ -0.48
SCAF1-204ENST00000601038 SLC25A39Q9BZJ4 359 aaPredicted RBP12.06□□□□□ -0.48
SCAF1-204ENST00000601038 TRAV8-2A0A0B4J237 113 aa12.05□□□□□ -0.48
SCAF1-204ENST00000601038 CCDC160A6NGH7 325 aa12.05□□□□□ -0.48
SCAF1-204ENST00000601038 PRSS29PA6NIE9 313 aa12.05□□□□□ -0.48
SCAF1-204ENST00000601038 H3BRN7 92 aa12.05□□□□□ -0.48
SCAF1-204ENST00000601038 ADAP1O75689 374 aa12.05□□□□□ -0.48
SCAF1-204ENST00000601038 IL5P05113 134 aa12.05□□□□□ -0.48
SCAF1-204ENST00000601038 HTN3P15516 51 aa12.05□□□□□ -0.48
SCAF1-204ENST00000601038 PLP1P60201 277 aa12.05□□□□□ -0.48
SCAF1-204ENST00000601038 DAD1P61803 113 aa12.05□□□□□ -0.48
SCAF1-204ENST00000601038 POLR2GP62487 172 aaKnown RBP eCLIP12.05□□□□□ -0.48
SCAF1-204ENST00000601038 RNF212Q495C1 297 aa12.05□□□□□ -0.48
SCAF1-204ENST00000601038 IGFL4Q6B9Z1 124 aa12.05□□□□□ -0.48
SCAF1-204ENST00000601038 OR11H7Q8NGC8 314 aa12.05□□□□□ -0.48
SCAF1-204ENST00000601038 SHANK2-AS3Q9BTD1 123 aa12.05□□□□□ -0.48
SCAF1-204ENST00000601038 PSENENQ9NZ42 101 aa12.05□□□□□ -0.48
SCAF1-204ENST00000601038 HERC2O95714 4834 aa12.04□□□□□ -0.48
SCAF1-204ENST00000601038 SMCO3A2RU48 225 aa12.04□□□□□ -0.48
SCAF1-204ENST00000601038 NAP1L6A6NFF2 107 aa12.04□□□□□ -0.48
SCAF1-204ENST00000601038 PMS2P5A8MQ11 134 aa12.04□□□□□ -0.48
SCAF1-204ENST00000601038 CRXO43186 299 aaPredicted RBP12.04□□□□□ -0.48
SCAF1-204ENST00000601038 HYPMO75409 117 aa12.04□□□□□ -0.48
SCAF1-204ENST00000601038 NDUFB6O95139 128 aa12.04□□□□□ -0.48
SCAF1-204ENST00000601038 RPL7P18124 248 aaKnown RBP12.04□□□□□ -0.48
SCAF1-204ENST00000601038 RAP2BP61225 183 aa12.04□□□□□ -0.48
SCAF1-204ENST00000601038 B2MP61769 119 aa12.04□□□□□ -0.48
SCAF1-204ENST00000601038 FGL1Q08830 312 aa12.04□□□□□ -0.48
SCAF1-204ENST00000601038 SPINK13Q1W4C9 94 aa12.04□□□□□ -0.48
SCAF1-204ENST00000601038 SPANXN2Q5MJ10 180 aa12.04□□□□□ -0.48
SCAF1-204ENST00000601038 RNF182Q8N6D2 247 aa12.04□□□□□ -0.48
SCAF1-204ENST00000601038 SMIM8Q96KF7 97 aa12.04□□□□□ -0.48
SCAF1-204ENST00000601038 SRRQ9GZT4 340 aa12.04□□□□□ -0.48
SCAF1-204ENST00000601038 HIGD1AQ9Y241 93 aa12.04□□□□□ -0.48
SCAF1-204ENST00000601038 M0R2Z0 102 aa12.03□□□□□ -0.48
SCAF1-204ENST00000601038 INSP01308 110 aa12.03□□□□□ -0.48
SCAF1-204ENST00000601038 SELENOTP62341 195 aa12.03□□□□□ -0.48
SCAF1-204ENST00000601038 Q6ZR54 194 aa12.03□□□□□ -0.48
SCAF1-204ENST00000601038 IGLV2-18A0A075B6J9 118 aa12.02□□□□□ -0.49
SCAF1-204ENST00000601038 ZNF705GA8MUZ8 300 aaPredicted RBP12.02□□□□□ -0.49
SCAF1-204ENST00000601038 SSSCA1O60232 199 aa12.02□□□□□ -0.49
SCAF1-204ENST00000601038 LINC00869P0C866 280 aa12.02□□□□□ -0.49
SCAF1-204ENST00000601038 INPP1P49441 399 aa12.02□□□□□ -0.49
SCAF1-204ENST00000601038 DLK1P80370 383 aa12.02□□□□□ -0.49
SCAF1-204ENST00000601038 TMEM88Q6PEY1 159 aa12.02□□□□□ -0.49
SCAF1-204ENST00000601038 S100A7AQ86SG5 101 aa12.02□□□□□ -0.49
SCAF1-204ENST00000601038 ZNF738Q8NE65 137 aa12.02□□□□□ -0.49
SCAF1-204ENST00000601038 FLVCR2Q9UPI3 526 aa12.02□□□□□ -0.49
SCAF1-204ENST00000601038 LYRM9A8MSI8 78 aa12.01□□□□□ -0.49
SCAF1-204ENST00000601038 FNDC10F2Z333 226 aa12.01□□□□□ -0.49
SCAF1-204ENST00000601038 PRM2P04554 102 aa12.01□□□□□ -0.49
SCAF1-204ENST00000601038 OR5G3P0C626 314 aa12.01□□□□□ -0.49
SCAF1-204ENST00000601038 OR4E1P0C645 316 aa12.01□□□□□ -0.49
SCAF1-204ENST00000601038 TSPOP30536 169 aa12.01□□□□□ -0.49
SCAF1-204ENST00000601038 BAK1Q16611 211 aa12.01□□□□□ -0.49
SCAF1-204ENST00000601038 TMEM14EPQ6UXP3 125 aa12.01□□□□□ -0.49
SCAF1-204ENST00000601038 UHRF2Q96PU4 802 aa12.01□□□□□ -0.49
SCAF1-204ENST00000601038 NPVFQ9HCQ7 196 aa12.01□□□□□ -0.49
SCAF1-204ENST00000601038 HECTD4Q9Y4D8 3996 aa12.01□□□□□ -0.49
SCAF1-204ENST00000601038 A0A087X0K7 114 aa12□□□□□ -0.49
SCAF1-204ENST00000601038 BOLA2-SMG1P6H3BVE0 249 aa12□□□□□ -0.49
SCAF1-204ENST00000601038 K7EPK0 472 aa12□□□□□ -0.49
SCAF1-204ENST00000601038 CCNKO75909 580 aa12□□□□□ -0.49
SCAF1-204ENST00000601038 MED14OSP0DP75 135 aa12□□□□□ -0.49
SCAF1-204ENST00000601038 CXCL3P19876 107 aa12□□□□□ -0.49
SCAF1-204ENST00000601038 RRAS2P62070 204 aaPredicted RBP12□□□□□ -0.49
SCAF1-204ENST00000601038 TRIQKQ629K1 86 aa12□□□□□ -0.49
SCAF1-204ENST00000601038 BAP18Q8IXM2 172 aa12□□□□□ -0.49
SCAF1-204ENST00000601038 C15orf53Q8NAA6 179 aa12□□□□□ -0.49
SCAF1-204ENST00000601038 OR10P1Q8NGE3 313 aa12□□□□□ -0.49
SCAF1-204ENST00000601038 RBM38Q9H0Z9 239 aaKnown RBP12□□□□□ -0.49
SCAF1-204ENST00000601038 RNF24Q9Y225 148 aa12□□□□□ -0.49
SCAF1-204ENST00000601038 ZNF701M0R085 212 aaPredicted RBP11.99□□□□□ -0.49
SCAF1-204ENST00000601038 METTL15P1P0C7V9 234 aa11.99□□□□□ -0.49
SCAF1-204ENST00000601038 PSG3Q16557 428 aa11.99□□□□□ -0.49
SCAF1-204ENST00000601038 C4orf46Q504U0 113 aa11.99□□□□□ -0.49
SCAF1-204ENST00000601038 TEPPQ6URK8 271 aa11.99□□□□□ -0.49
SCAF1-204ENST00000601038 OR8A1Q8NGG7 326 aa11.99□□□□□ -0.49
SCAF1-204ENST00000601038 ARL6Q9H0F7 186 aa11.99□□□□□ -0.49
SCAF1-204ENST00000601038 KIAA1109Q2LD37 5005 aa11.99□□□□□ -0.49
SCAF1-204ENST00000601038 TRAV12-2A0A075B6T6 113 aa11.98□□□□□ -0.49
SCAF1-204ENST00000601038 TSC22D2O75157 780 aa11.98□□□□□ -0.49
SCAF1-204ENST00000601038 ANXA7P20073 488 aaKnown RBP11.98□□□□□ -0.49
SCAF1-204ENST00000601038 AZU1P20160 251 aa11.98□□□□□ -0.49
SCAF1-204ENST00000601038 FAM3BP58499 235 aaPredicted RBP11.98□□□□□ -0.49
SCAF1-204ENST00000601038 TAS2R30P59541 319 aa11.98□□□□□ -0.49
SCAF1-204ENST00000601038 RHOBP62745 196 aa11.98□□□□□ -0.49
SCAF1-204ENST00000601038 HIST1H1AQ02539 215 aaPredicted RBP11.98□□□□□ -0.49
SCAF1-204ENST00000601038 IAH1Q2TAA2 248 aaPredicted RBP11.98□□□□□ -0.49
SCAF1-204ENST00000601038 SOHLH1Q5JUK2 328 aa11.98□□□□□ -0.49
SCAF1-204ENST00000601038 PXDC1Q5TGL8 231 aa11.98□□□□□ -0.49
SCAF1-204ENST00000601038 PATE2Q6UY27 113 aa11.98□□□□□ -0.49
SCAF1-204ENST00000601038 TMEM256Q8N2U0 113 aa11.98□□□□□ -0.49
SCAF1-204ENST00000601038 LRRC20Q8TCA0 184 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms